Fungal Diversity Research Articles

Dynamics and biodiversity of microbial community among seasons in Shanxi mature vinegar fermentation by semisolid-solid process.

Understanding the changes in microbial communities across different seasons is crucial for ensuring the quality of Shanxi mature vinegar (SMV) by the semisolid-solid process. In a complete seasonal cycle, the richness and diversity of fungi were higher than those of bacteria. The microbial community in summer fermentation was significantly different compared to the other three seasons. For example, the dominant microorganisms such as Acetobacter and Lactobacillus decreased in summer. Screening or modifying this group of bacteria to enhance their tolerance to high fermentation temperature is an approach to improve industrial SMV fermentation. Through co-occurrence network analysis, eight highly connected genera were identified, which may play important roles in ecosystem stability. These results also lay a theoretical foundation for the further development of multi-microbial co-fermentation. This work provides an understanding of SMV fermentation from a seasonal perspective and offers new guidance for the process control of grain vinegar brewing.

Karst Ecosystem: Moso Bamboo Intercropping Enhances Soil Fertility and Microbial Diversity in the Rhizosphere of Giant Lily (Cardiocrinum giganteum)

Intercropping affects soil microbial community structure significantly; however, the effects on understory medicinal plants in karst areas remain unclear. We investigated the effects of four intercropping systems (Moso bamboo, Chinese fir, bamboo-fir mixed forest, and forest gap) on the rhizosphere microbial communities of giant lily (Cardiocrinum giganteum), an economically important medicinal plant in China. We assessed the intercropping impact on rhizosphere microbial diversity, composition, and co-occurrence networks and identified key soil properties driving the changes. Bacterial and fungal diversity were assessed by 16S rRNA and ITS gene sequencing, respectively; soil physicochemical properties and enzyme activities were measured. Moso bamboo system had the highest fungal diversity, with relatively high bacterial diversity. It promoted a distinct microbial community structure with significant Actinobacteria and saprotrophic fungi enrichment. Soil organic carbon, total nitrogen, and available potassium were the most influential drivers of microbial community structure. Co-occurrence network analysis revealed that the microbial network in the Moso bamboo system was the most complex and highly interconnected, with a higher proportion of positive interactions and a greater number of keystone taxa. Thus, integrating Moso bamboo into intercropping systems can enhance soil fertility, microbial diversity, and ecological interactions in the giant lily rhizosphere in karst forests.

Characterization of airborne microbial communities in northern Thailand: Impacts of smoke haze versus non-haze conditions

Data on airborne microorganisms, particularly in Southeast Asia, are more limited compared to chemical data. This study is the first to examine the community and diversity of microorganisms on PM2.5 in an urban area of Northern Thailand during both smoke haze and non-smoke haze periods of 2020. This study evaluated the composition of airborne bacteria and fungi and analyzed their association with the chemical composition of PM2.5 and meteorological variables. Significantly higher concentrations of PM2.5 and more chemical compounds were observed during the smoke haze period compared to the non-smoke haze period. Increased PM2.5 concentrations significantly altered both bacterial and fungal communities. The diversity and richness of airborne bacteria increased, whereas those of fungi decreased. The level of PM2.5 concentration (the carrier), the chemical composition of PM2.5 (the resources for survival), and the local meteorological conditions (relative humidity (RH)) were associated with the differences in bacterial and fungal populations. In addition, air originating from the west of the receptor site, influenced by both terrestrial and marine air mass routes, contributed to higher bacterial diversity and richness during the smoke haze period. In contrast, fungal diversity and richness were greater when the air came from the southwest, following a marine route. However, the primary health concern is pathogens, which were present in both periods (such as Clostridium, Aspergillus, and Cladosporium) and were especially abundant during smoke haze periods. This study highlights those airborne microorganisms, along with the particles and their chemical composition, are important components that can impact health, including that of humans, animals, and the environment.

Seedborne Fungal Detection Differs with Seed Assay Method, and Fungal Diversity and Abundance Are Impacted by Fungicide Treatment, Harvest Timing, and Storage Environment

Previous studies have shown that foliar fungicides increase the abundance of Diaporthe spp. in mature soybean seeds, thereby reducing seed quality and potentially increasing seedling, stem, and pod disease in subsequent plantings. To mitigate this, we examined a fungicide containing mefentrifluconazole, fluxapyroxad, and pyraclostrobin applied during the R3 growth stage. We compared the seedborne fungal community from soybeans harvested at full maturity and 2 to 3 weeks later to assess fungal colonization. Six trials were conducted in Iowa and South Dakota in 2021 and 2022. Asymptomatic, recently harvested seed was assayed using either an agar-plate or a seed-blotter test, and the results were compared. The agar-plate method involved disinfesting seeds in sodium hypochlorite and ethanol and then transferring them to acidified water agar plates. Fungal isolates were identified using morphology and DNA sequences. This method detected 562 fungal isolates from 25 species and 14 genera. Dry conditions reduced seed infection, but a 2-week delay in harvest increased the likelihood of Alternaria and Cercospora infection in nontreated controls. The seed-blotter test involved disinfesting seeds, placing them on blotter paper, and incubating them. This assay detected higher numbers of fungal infected seed, with Aspergillus as the dominant genus. Storage conditions significantly impacted fungal presence, with more Aspergillus in seeds stored in a shed than in the cooler. Both assay methods showed that the fungicide treatment reduced the number of seeds infected with Alternaria, Cercospora, and Aspergillus. [Formula: see text] Copyright © 2024 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .

Molecular and morphoanatomical characterization of Urocystis heteropogonis sp. nov.: a novel smut fungus infecting Heteropogon contortus

BackgroundA new species of smut fungus, Urocystis heteropogonis, was discovered infecting Heteropogon contortus in Shawar Valley, Swat district, Khyber Pakhtunkhwa, Pakistan. The study aimed to characterize this fungus based on its morpho-anatomical and molecular features and clarify its phylogenetic position within the genus Urocystis.ResultsUrocystis heteropogonis was identified as a novel species, distinct from other Urocystis species. Morphologically, it is characterized by larger spore balls (14–69 × 11–45 μm) and central spores that are 14–28 × 11–20 μm in size, with each spore containing1–8 central spores. The spore walls measure 0.9–2.5 μm in thickness and the species differs in infection patterns compared to other Urocystis species. Phylogenetic analysis based on the ITS and LSU regions of nuclear ribosomal DNA (nrDNA) further confirmed the novelty of the species, placing it within a distinct clade alongside U. agropyri, U. occulta, U. piptatheri, and U. tritici.ConclusionsThe discovery of Urocystis heteropogonis adds to the diversity of smut fungi infecting grasses and highlights the need for further research into its ecological and agricultural implications. Future studies should focus on the disease’s spread, management, and potential impact on host populations.

Continuous planting American ginseng (Panax quinquefolius L.) caused soil acidification and bacterial and fungal communities’ changes

BackgroundAmerican ginseng is an important herb crop and is widely cultivated in China. However, continuous cropping seriously affects the production of American ginseng, and the reason is still unclear and needs more research. We analyzed the soil microbial alpha diversity and community composition as well as soil physicochemical properties in bulk soils to assess the changes in soil associated with planting American ginseng.ResultsThe cultivation of American ginseng resulted in a significant decrease in soil pH value. The alpha diversity of soil bacteria and fungi was significantly reduced with the increase of American ginseng planting years. Planting American ginseng also largely altered the community composition of soil bacteria and fungi, in particularly, increased the relative abundance of the pathogenic fungus Fusarium, and reduced the relative abundance of some beneficial microorganisms, such as KD4-96, RB41 and Sphingomonas.ConclusionsSoil acidification, reduction of beneficial taxa and accumulation of fungal pathogens, therefore, may lead to the replantation problem of American ginseng.

Picky eaters: Selective microbial diet of avian ectosymbionts.

Individual organisms can function as ecosystems inhabited by symbionts. Symbionts may interact with each other in ways that subsequently influence their hosts positively or negatively, although the details of how these interactions operate collectively are usually not well understood. Vane-dwelling feather mites are common ectosymbionts of birds and are proposed to confer benefits to hosts by consuming feather-degrading microbes. However, it is unknown whether these mites exhibit generalist or selective diets, or how their dietary selection could potentially impact their symbiotic functional nature. In this study, we conducted 16S rDNA and ITS1 amplicon sequencing to examine the microbial diet of feather mites. We characterized and compared the diversity and composition of bacteria and fungi in the bodies of mites living on feathers of the Prothonotary Warbler, Protonotaria citrea, to microbial assemblages present on the same feathers. We found less diverse, more compositionally similar microbial assemblages within mites than on feathers. We also found that mites were resource-selective. Based on the identity and known functions of microbes found within and presumably preferred by mites, our results suggest that these mites selectively consume feather-degrading microbes. Therefore, our results support the proposition that mites confer benefits to their hosts. This study provides insight into symbioses operating at multiple biological levels, highlights the ecological and evolutionary importance of the synergistic interactions between species, and greatly expands our understanding of feather mite biology.

Aggregate Size Mediated the Changes in Soil Microbial Communities After the Afforestation of a Former Dryland in Northwestern China

Although the afforestation of former arable lands is a common global land-use conversion, its impact on soil microbial communities at the aggregate scale has not been adequately addressed. In this study, soil samples were categorized into large macroaggregates (LM, >2 mm), small macroaggregates (SM, 2–0.25 mm), and microaggregates (MI, <0.25 mm) to assess the changes in microbial composition, diversity, network complexity, and network stability within soil aggregates after the afforestation of a former dryland in northwestern China. The results revealed that afforestation enhanced the relative abundance of Actinobacteriota, Chloroflexi, Ascomycota, and Mortierellomycota within the soil aggregates, suggesting that these phyla may have greater advantages in microbial communities post-afforestation. The Shannon–Wiener and Pielou indices for bacterial communities showed no significant differences between land-use types across all aggregate fractions. However, the alpha diversity of fungal communities within the LM and SM significantly increased after afforestation. Bray–Curtis dissimilarity indices showed that afforestation altered bacterial beta diversity within the LM and MI but had a minimal impact on fungal beta diversity across all three aggregate fractions. The topological features of cross-kingdom microbial co-occurrence networks within the soil aggregates generally exhibited a decreasing trend post-afforestation, indicating a simplification of microbial community structure. The reduced robustness of microbial networks within the LM and SM fractions implies that afforestation also destabilized the structure of microbial communities within the macroaggregates. The composition of the soil microbial communities correlated closely with soil carbon and nitrogen contents, especially within the two macroaggregate fractions. The linkages suggests that improved resource conditions could be a key driver behind the shifts in microbial communities within soil aggregates following afforestation. Our findings indicate that the impact of afforestation on soil microbial ecology can be better understood by soil aggregate fractionation.

Fumigation Effect on the Mycorrhizal Status, the Mycorrhizal Diversity and the Roots System Development of Strawberry in Morocco

This study was undertaken to evaluate the fumigation effect on the mycorrhization status of strawberry roots, the diversity of indigenous arbuscular mycorrhizal fungi in the rhizosphere of strawberry and the roots system development of strawberry. Two parcels were taken randomly in the perimeter of Loukkos with fumigated one. For each parcel, samples of strawberry’s rhizosphere soil were taken regularly all over the cycle of culture. The mycorrhization parameters (mycorrhizal frequency, mycorrhizal intensity, arbuscular content, vesicular content and spores number) were calculated using Phillips and Hayman technique according to the scale of Trouvelot. An identification of spores was made according to the key International culture collection of Vesicular Arbuscular Mycorrhizal Fungi (INVAM). The frequency of the apparition of genera and species of spores at the sites were calculated. The roots system development was evaluated with the visual analogical scale (VAS: 0-100 mm). All the parameters were compared between the two parcels. Results showed that Mycorrhizal frequency, the number of spores and the roots system development between fumigated soil and non-fumigated one were respectively ((99.3 ± 2.8 vs. 100); (69 ± 12.3 vs. 137.5 ± 47.8); (23.8 ± 9.6 vs. 63.1 ± 21.6)). Six genera with nine species were identified and three undefined. Glomus genera were the dominant. In multivariate analysis, the roots system development was dependant to the fumigation status (yes/no), the vesicular content and the mycorrhization frequency. The roots system development was dependant to the fumigation status (yes/no) and spores number. As conclusion, this study suggests that the fumigation has a significant effect on the mycorrhization colonisation of roots, diversity of AMF and roots system development of strawberry.

Three Ophiostomatalean Fungi Associated with Bark Beetles from Pinus thunbergii Infested by Bursaphelenchus xylophilus in Laoshan Mountain (Shandong, China)

Pine wilt disease (PWD) is a devastating disease that occurs worldwide and affects conifers infested by the pine wood nematode (PWN, Bursaphelenchus xylophilus). PWD has caused serious economic and ecological losses in China. The mechanism of disease outbreak is complex, with the associated fungi, specifically ophiostomatoid fungi, thought to play an essential role. However, few ophiostomatoid fungal associates of PWD have been accurately identified. In the present study, we isolated fungi from bark beetles collected from Pinus thunbergii infested by the pine wood nematode on Laoshan Mountain, Shandong province. Three ophiostomatalean fungi were identified and assigned to Graphilbum and Ophiostoma based on phylogenetic analyses and comparison of morphological and cultural features, namely Gra. laoshanense sp. nov., Gra. translucens, and O. ips. This study increases the understanding of the diversity of ophiostomatoid fungi associated with PWD and provides resources for parsing this complex disease.

Understanding the Pathogenesis, Biocontrol Mechanisms, and Factors Influencing Biocontrol Effectiveness for Soil-Borne Diseases in Panax Plants.

Panax plants are known for their significant medicinal and economic value. Being perennial, they are prone to soil-borne diseases during cultivation. However, there has been limited research on the pathogenesis of soil-borne diseases and the diversity of pathogens. While biological control has gained attention for its efficacy and environmental benefits, the factors affecting its efficiency still need thorough evaluation. This review summarizes the influence of biotic factors, such as pathogens and hosts, and environmental factors on the occurrence of soil-borne diseases and pathogen diversity. Additionally, we synthesized bacterial, actinobacterial, and fungal diversity for the biocontrol of soil-borne diseases and their functional mechanisms. Moreover, the review delves into the factors influencing the efficacy of biocontrol, including microbial species, the inoculation method and inoculation volume, and inoculant composition. This article serves as a valuable resource for enhancing the efficiency of biological control and optimizing strategies for managing soil-borne diseases in Panax cultivation in the future.

Oral Mycobiome Alterations in Postmenopausal Women: Links to Inflammation, Xerostomia, and Systemic Health.

The oral mycobiome plays a critical role in maintaining oral and systemic health, with its composition and function influenced by various physiological and environmental factors. This descriptive review explores the changes in the oral mycobiome among postmenopausal women, examining how aging and associated inflammatory processes contribute to these alterations. These changes are linked to an increased prevalence of xerostomia, oral dysbiosis, and inflammation, which can negatively impact both oral and systemic health. We discuss the impact of hormonal fluctuations and immune senescence on fungal diversity and abundance, highlighting key species implicated in oral and systemic diseases. The review also examines the role of systemic conditions and medications, which are common in postmenopausal women, in further exacerbating oral mycobiome alterations. Lastly, it highlights the need for future research to better understand these interactions and develop targeted therapeutic strategies. The current literature indicates a significant association between menopausal status, age-related mycobiome shifts, and increased inflammatory responses, suggesting potential pathways for intervention.

Genetic diversity and population structure of Alternaria alternata: An endophytic fungus isolated from various hosts

Alternaria alternata is a significant fungal species that can function as both an endophytic fungus and a pathogen in various plant tissues. Unlike pathogenic fungi, endophytic fungi enhance the growth of host plants through different mechanisms. Studying the genetic diversity of endophytic fungi can provide insights into their co-evolution with plants. In this research, the genetic diversity of A. alternata from different hosts was examined using ten pairs of ISSR primers. Seven of the ten primers generated scorable polymorphic bands (total of 65 bands with an average of 9.2 bands per primer) for molecular analysis. Genetic diversity parameters revealed that isolates from Gundelia tournefortii exhibited the highest genetic diversity (Na, Ne, I, and He values of 1.55, 1.45, 0.35, and 0.24, respectively), while isolates from Tamarix ramosissima showed lower diversity (Na, Ne, I, and He values of 1.18, 1.13, 0.11, and 0.07, respectively). Cluster analysis grouped the isolates into four clusters based on Jaccard similarity matrix and UPGMA method. Principal coordinate analysis (PCOA) supported the cluster analysis findings. Analysis of molecular variance (AMOVA) indicated a high level of genetic differentiation within populations (72 %), with only 28 % of diversity between populations. The genetic structure assessment revealed a relatively strong genetic structure among populations, suggesting the presence of a hidden sexual cycle or mitotic recombination as factors contributing to the high genetic differentiation among A. alternata populations.

Litter Removal Counteracts the Effects of Warming on Soil Bacterial Communities in the Qinghai-Tibet Plateau.

Climate warming and high-intensity human activities threaten the stability of alpine meadow ecosystems. The stability of the soil microbial community is crucial for maintaining ecological service function. However, the effects of warming and litter removal on microbial interactions, community-building processes, and species coexistence strategies remain unclear. In this study, we used a fiberglass open-top chamber to simulate global change, and moderate grazing in winter was simulated by removing above-ground litter from all plants in the Qinghai-Tibet Plateau, China, to investigate the effects of warming, litter removal, and interactions on soil microbial communities. The treatments included (1) warming treatment (W); (2) litter removal treatment (L); (3) the combined treatment (WL); and (4) control (CK). The results show that compared with the control treatment, warming, litter removal, and the combined treatments increased bacterial Shannon diversity but reduced fungal Shannon diversity, and warming treatment significantly changed the bacterial community composition. Warming, litter removal, and the combined treatments reduced the colinear network connectivity among microorganisms but increased the modularity of the network, and the average path distance and average clustering coefficient were higher than those in the control group. Stochastic processes played a more important role in shaping the microbial community composition, and soil-available phosphorus and soil ammonium contributed more to the βNTI of the bacterial community, while total phosphorus and NAG enzyme in the soil contributed more to the βNTI of the fungal community. Notably, litter removal counteracts the effects of warming on bacterial communities. These results suggest that litter removal may enhance bacterial community stability under warming conditions, providing insights for managing alpine meadow ecosystems in the context of climate change.

Short-term organic fertilizer substitution increases sorghum yield by improving soil physicochemical characteristics and regulating microbial community structure.

Chemical fertilizer reduction combined with organic fertilizer (organic fertilizer substitution) has a positive impact on crop productivity and sustainable development. However, the effects of short-term organic fertilizer substitution on microbial community structure and functions of sorghum rhizosphere soil and on sorghum yield remain unclear. Herein, this study investigated the short-term effects of organic fertilizer substitution on sorghum soil physicochemical properties, microbial community structure and enzyme activities using Metagenomic sequencing technology. The fertilization treatment included no fertilization (CK), pure chemical fertilizer N (CF), substitution of 25% chemical fertilizer N with organic N (NF25), substitution of 50% chemical fertilizer N with organic N (NF50), substitution of 75% chemical fertilizer N with organic N (NF75), and pure organic fertilizer N (NF100); soil samples were collected and analyzed in the flowering period of sorghum. The results showed that the suitable organic fertilizer substitution rate of sorghum field was 50%, and its yield was the highest among all treatments (9789.9 kg/hm2). Compared with the CF treatment, a medium ratio (50%) of organic fertilizer substitution significantly reduced soil alkalization (by 3.05%), improved soil nutrients, enhanced soil enzyme activities, and increased sorghum yield (P < 0.05). After organic fertilizer substitution treatment, higher protein, fat, and total starch levels accumulated in sorghum grains, and the tannin content of grains decreased. The effect of organic fertilizer substitution on bacterial diversity was greater than that on fungal diversity. Among the dominant bacterial phyla, the medium ratio of organic substitution treatment significantly increased the relative abundances of Proteobacteria (by 3.57%) and Actinomycetes (by 14.94%), and decreased the relative abundances of Acidobacteria (by 5.18%) and Planctomycetes (by 7.76%) compared with no fertilization, while the dominant fungal phyla did not respond significantly to the addition of organic fertilizer. Organic fertilizer substitution also improved soil microbial metabolic pathways, biosynthesis of secondary metabolites, and carbon metabolism. The biomarkers enriched in inorganic fertilizer treatment and organic fertilizer substitution treatments had similar relevant environmental elements but reversed correlation trends. Moreover, soil Alkali-hydrolyzable nitrogen and L-leucine aminopeptidase were important environmental factors influencing the structure of bacterial and fungal communities in sorghum soils, respectively. Soil nutrient levels and microbial communities together explained the variation in annual sorghum yield. The results of this study provide evidence that short-term organic fertilizer substitution increases sorghum yield by improving soil properties and regulating microbial community structure.

Effect of Integrated Crop–Livestock Systems on Soil Properties and Microbial Diversity in Soybean Production

Integrated crop and livestock systems (ICLSs) have been considered an important management-based decision to improve soil health by carbon sequestration. A two-year study (2019–2021) at CPBES in Newton, MS, was conducted to evaluate the effect of an ICLS on soil microbial diversity in the southeastern region of the USA, representing agroclimatic conditions that are warm and humid. Amplicons targeting bacterial 16S rRNA genes and fungal ITS2 regions were sequenced. Taxonomic assignment and characterization of microbial diversity were performed using QIIME2®. Soil fungal diversity pattern showed significant difference (alpha diversity, p = 0.031 in 2020 and beta diversity, p = 0.037 in 2021). In contrast, no significant differences were observed in bacterial diversity. However, there were several beneficial bacterial phyla, such as Proteobacteria and Actinobacteria, and fungal phyla such as Ascomycota, which were dominant in both years and did not show significant differences due to cover crop treatments. Canonical Correspondence Analysis (CCA) and Mantel test showed significant influence on fungal diversity due to carbon (rm = 0.2581, p = 0.022), nitrogen (rm = 0.2921, p = 0.0165), and electrical conductivity (rm = 0.1836, p = 0.0583) in 2021, and on bacterial diversity due to EE-GRSP (rm = 0.22, p = 0.02) in 2020. However, the results showed that there were no significant differences between the cover crop treatments that were consistent over a two-year study period. However, the mix of different cover crops such as oats (Avena sativa L.), crimson clover (Trifolium incarnatum L.), and tillage radish (Raphanus sativus L.) demonstrated higher positive correlation and lower negative correlation with different bacterial and fungal phyla. Long term study of ICLS is suggested to understand the shift in microbiome that would help in understanding the role of cover crops and grazing in improving crop production sustainably.

Morphology, phylogeny, and mitogenomics reveal a new entomopathogenic fungus, Blackwellomyces changningensis (Hypocreales, Clavicipitaceae), from southwestern China

ABSTRACT Two species of Blackwellomyces (Clavicipitaceae, Hypocreales, Ascomycota) were discovered during an investigation of the diversity of entomopathogenic fungi. A new fungus and one known fungal species that were gathered from Yunnan Province were described in this study. Blackwellomyces changningensis, sp. nov. was described using morphology and phylogenetic evidence from 14 mitochondrial protein-coding gene (PCG) data sets (atp6, atp8, atp9, cob, cox1, cox2, cox3, nad1, nad2, nad3, nad4, nad5, nad6, and nad4L) and six nuclear genes (ITS [ITS4 and ITS5], 18S nuc rDNA [18S], 28S nuc rDNA [28S], tef1-α, rpb1, and rpb2). B. changningensis were found parasitic to Lepidoptera larvae and to produce filiform ascospores with septations. The asexual conidia were ovoid to ellipsoid in shape. Phylogenetic analysis and morphological observations concurred that the fungus belonged to a different species within the genus of Blackwellomyces. The foundation for further taxonomic, genetic, and evolutionary biological studies of the genus Blackwellomyces was laid by this work.

Vertical fungal community distribution patterns along a stratified soil profile in subalpine Larix principis-rupprechtii plantations on China's Luya mountain

Soil microorganisms play important roles in the biogeochemical cycling of terrestrial ecosystems. Recent studies found that soil fungal composition and diversity varied significantly with soil depth. However, little is known about the vertical distribution patterns of soil fungal communities and their associated drivers. For this study, we collected soil samples from six soil layers (i.e., litter layer (P), humus layer (P0), 0–10 cm layer (P1), 10–20 cm layer (P2), 20–40 cm layer (P3), and 40–80 cm layer (P4)) within Larix principis-rupprechtii plantations to investigate fungal community composition, diversity, and associated drivers using Illumina MiSeq high-throughput sequencing. Results showed that the top 10 dominant genera with the highest relative abundance belonged to Ascomycota, Basidiomycota, and Mortierellomycota. A decreasing α-diversity trend was observed along with soil depth. Moreover, correlation analysis showed that ammonia nitrogen (NH4+-N), pH, total carbon (TC), and total nitrogen (TN) content markedly correlated with fungal α-diversity. Significant β-diversity differences were found in soil fungal communities. Additionally, TN and total phosphorus (TP) content were the main environmental drivers that influenced the spatial distribution pattern of fungal communities. The βNTI showed a gradual increase with soil depth. In the surface layers of soil, the dominant factor of fungal community assembly was homogeneous selection, while in the deep layers of soil, it was variable selection. Co-occurrence network analysis showed that fungal community interactions in the deepest soil layer (40–80 cm) were more complex and were more positive. Results from this study provide a theoretical basis and data support to understand the mechanisms of soil fungal community assembly processes more deeply in L. principis-rupprechtii plantations.

Subtle changes in topsoil microbial communities of drained forested peatlands after prolonged drought.

A major consequence of anthropogenic climate change is the intensification and extension of drought periods. Prolonged drought can alter conditions in drained peatlands and cause disturbances in microbial communities in the topsoil layer of the peat. Varying environmental conditions throughout the growing season, such as the availability of organic matter and nutrients, temperature and water table, further impact these communities and consequently affect carbon and nutrient cycles. The impact of drought and new forestry practices is largely unknown in drained peatland forests. We examined how microbial communities change over a growing season in different harvesting intensities (continuous cover forestry, clear-cut and uncut) in a drained peatland site using bacterial 16S and fungal ITS2 rRNA analysis. We found seasonal differences in bacterial and fungal diversity and species richness, and subtle changes in microbial communities at the phylum and genus levels when comparing various environmental factors. Diversity, species richness and relative abundance differed in spring compared to summer and autumn. However, significant differences in the microbial community structure were not detected. Understanding the responses of microbial communities to disturbances like drought and other environmental factors provides new insights into the consequences of climate change on drained forested peatlands.

Microencapsulated Microbial Seed Coating Could Improve Soil Environment and Maize Grain Yield in Saline Soil.

Soil salinization is one of the major challenges for modern agriculture, posing a great threat to soil health and food security. Field experiments were conducted to evaluate the effect of seed coating on soil environment and maize growth in saline soils. Three treatments were applied to maize seeds: coating with a microencapsulated microbial agent (ME), coating with microbial only (MB), and no coating (CK). High-throughput sequencing of soil bacterial and fungal 16S and ITS rRNA genes was performed using the Illumina HiSeq platform to analyze the effects of these treatments on soil bacterial and fungal diversity and community structure. Additionally, the influence of different treatments on endogenous hormones and yield of maize were investigated. It was found that the coating with a microencapsulated microbial agent led to decreases in pH and electrical conductivity (EC), while increasing the content of soil available phosphorus. This coating improved soil microbial diversity, significantly increasing the relative abundance of the main bacteria genera, Bacillus (34.9%), and the main fungal genera, Mortierella (190.4%). The treatment also significantly enhanced indole-3-acetic acid (IAA) by 51.2%, contributing to improvements in resistance to salt stress. The germination rate increased by 22.9%, the 100-grain weight increased by 12.7%, and grain yield increased by 14.3%. The use of the microencapsulated microbial agent effectively mitigated the adverse effects of salt stress on maize plants. This approach is beneficial for promoting sustainable agriculture in saline soils.