Dynamic response of functionally graded Carbon nanotubes (FG-CNT) reinforced pipes conveying viscous fluid under accelerated moving load is presented. The mixture rule is used for obtaining the material properties of nano-composite pipe. The radial force induced by viscous fluid is calculated by Navier–Stokes equation. The material properties of pipe are considered temperature-dependent. The structure is simulated by Reddy higher-order shear deformation shell theory and the corresponding motion equations are derived by Hamilton\'s principal. Differential quadrature (DQ) method and the Integral Quadrature (IQ) are applied for analogizing the motion equations and then the Newmark time integration scheme is used for obtaining the dynamic response of structure. The effects of different parameters such as boundary conditions, geometrical parameters, velocity and acceleration of moving load, CNT volume percent and distribution type are shown on the dynamic response of pipe. Results indicate that increasing CNTs leads to decrease in transient deflection of structure. In accelerated motion of the moving load, the maximum displacement is occurred later with respect to decelerated motion of moving load.