This study is aiming to evaluate the optimization potential of anaerobic digestion systems for the treatment of complex agro-industrial wastes at an industrial scale. In previous work, the performance of a 20 L pilot-scale Plug Flow Reactor (PFR) that was able to operate at Organic Loading Rates (OLRs) of up to 25 kg Chemical Oxygen Demand (COD) m−3 d−1, was demonstrated. This concept was then successfully transferred in a semi-industrial scale PFR of a volume equal to 50 m3, and the optimal operational parameters were evaluated. The construction of a full industrial scale facility followed, utilizing initially a 380 m3 PFR. Since PFR systems in practice do not behave ideally, due to short Length to Diameter ratio (L/D) and/or higher axial dispersion, the ideal PFR behavior was compared with real data of the non-ideal industrial-scale system; a performance reduction of 25–30 % was detected. However, the disadvantage of the non-ideal behavior of PFRs can be overcome by the cascaded arrangement of two such reactors (2 × 380 m3 PFRs), leading to a total volume reduction of 35 %, as depicted by experimentation on the industrial scale cascaded PFRs. The optimal design parameters for the PFRs are provided.