Formation Of Bacterial Communities Research Articles

Atmospheric dispersal shapes rapid bacterial colonization of Icelandic Lava Rocks.

Microorganisms released into the atmosphere by various disturbances can travel significant distances before depositing, yet their impact on community assembly remains unclear. To address this, we examined atmospheric and lithospheric bacterial communities in 179 samples collected at two distinct Icelandic volcanic sites: a small volcanic island Surtsey, and a volcanic highland Fimmvörðuháls using 16S rRNA amplicon sequencing. Airborne microbial communities were similar between sites while significant differences emerged in the communities on lava rocks after 1-year exposure. SourceTracker analysis revealed distinct bacterial populations in the atmosphere and the lava rocks with surrounding soil contributed more significantly to lava rock microbial composition. Nevertheless, shared genera among air, rocks, and local sources, suggested potential exchange between these environments. The prevalent genera shared between rocks and potential sources exhibited stress-resistant properties, likely helping their survival during air transportation and facilitating their colonization of the rocks. We hypothesize that the atmosphere serves as a conduit for locally sourced microbes and stress-resistant distant-sourced microbes. Additionally, bacterial communities on the lava rocks of Fimmvörðuháls showed remarkable similarity after 1 and 9 years of exposure, suggesting rapid establishment. Our study reveals that atmospheric deposition significantly influences bacterial community formation, potentially influencing ecosystem dynamics and microbial communities' resilience.

The complex relationships between diatoms, bacterial communities, and dissolved organic matter: Effects of silicon concentration

Complex relationships exist between diatoms, bacterial communities and dissolved organic matter in aquatic ecosystems. Clarifying their relationships is essential to reveal biogeochemical cycles. In this study, the diatom Cyclostephanos invisitatus was cultured in standard silicon (SS), no silicon (NS), and excessive silicon (ES). Integrated 16S rDNA high-throughput sequencing and excitation-emission matrix parallel factor analysis (EEM-PARAFAC) were used to investigate diatom growth, bacterial community and dissolved organic matter (DOM) characteristics. It was found that the abundance of diatoms decreased in no silicon and excessive silicon conditions. Further, the composition and function of the associated bacterial communities were affected. The Proteobacteria and Cyanobacteria were more highly represented in the attached bacteria, whereas the Proteobacteria and Bacteroidetes were more highly represented in the free-living bacteria. Alpha diversity showed different trends with incubation time in all treatments. Moreover, genes (K01995 to K01998) involved in environmental information processing were more abundant in diatoms during the stationary phase in attached bacterial community. Stochastic processes play a key role in the formation of bacterial communities, both for attached and free-living bacteria. In addition, the differences in fluorescence components (protein and humic-like) and spectral indices (fluorescence index, biological index, freshness index, and humification index) revealed intricate relationship between microalgae and bacteria. Overall, this work confirmed the importance of silicon concentration in regulating diatom-associated bacterial communities and DOM characteristics.

Role of plant metabolites in the formation of bacterial communities in the rhizosphere of Tetrastigma hemsleyanum.

Tetrastigma hemsleyanum Diels et Gilg, commonly known as Sanyeqing (SYQ), is an important traditional Chinese medicine. The content of bioactive constituents varies in different cultivars of SYQ. In the plant growth related researches, rhizosphere microbiome has gained significant attention. However, the role of bacterial communities in the accumulation of metabolites in plants have not been investigated. Herein, the composition of bacterial communities in the rhizosphere soils and the metabolites profile of different SYQ cultivars' roots were analyzed. It was found that the composition of microbial communities varied in the rhizosphere soils of different SYQ cultivars. The high abundance of Actinomadura, Streptomyces and other bacteria was found to be associated with the metabolites profile of SYQ roots. The findings suggest that the upregulation of rutin and hesperetin may contribute to the high bioactive constituent in SYQ roots. These results provide better understanding of the metabolite accumulation pattern in SYQ, and also provide a solution for enhancing the quality of SYQ by application of suitable microbial consortia.

A human urothelial microtissue model reveals shared colonization and survival strategies between uropathogens and commensals.

Urinary tract infection is among the most common infections worldwide, typically studied in animals and cell lines with limited uropathogenic strains. Here, we assessed diverse bacterial species in a human urothelial microtissue model exhibiting full stratification, differentiation, innate epithelial responses, and urine tolerance. Several uropathogens invaded intracellularly, but also commensal Escherichia coli, suggesting that invasion is a shared survival strategy, not solely a virulence hallmark. The E. coli adhesin FimH was required for intracellular bacterial community formation, but not for invasion. Other shared lifestyles included filamentation (Gram-negatives), chaining (Gram-positives), and hijacking of exfoliating cells, while biofilm-like aggregates were formed mainly with Pseudomonas and Proteus. Urothelial cells expelled invasive bacteria in Rab-/LC3-decorated structures, while highly cytotoxic/invasive uropathogens, but not commensals, disrupted host barrier function and strongly induced exfoliation and cytokine production. Overall, this work highlights diverse species-/strain-specific infection strategies and corresponding host responses in a human urothelial microenvironment, providing insights at the microtissue, cell, and molecular level.

Sedimentary bacterial communities in subtropical Beibu Gulf: Assembly process and functional profile

Bacterial communities in marine sediments of the subtropical Beibu Gulf differ significantly from those of other regions. Thus, it is of great importance to study the marine sediment characteristics comprising bacterial composition, diversity, assembly processes, and functional profile. However, such sediments characteristics in subtropical Beibu Gulf remain unclear. Therefore, we studied the diversity, assembly processes, and functional profiles of the bacterial communities in sediment samples collected from 21 sites in the Beibu Gulf. Upon analysis, Proteobacteria was determined to be the dominant phylum using 16S rRNA sequencing. Predominantly deterministic processes shaped the formation of bacterial communities. The predicted bacterial functional groups involved in the carbon cycle (59.06%) were most abundant in the FAPROTAX database, followed by nitrogen (9.25%) and sulfur (1.01%). Furthermore, the composition of the bacterial community was significantly influenced by TC, TP, and TS (p < 0.001). These results broaden our knowledge of the composition, diversity, assembly processes, and functional profile of bacterial communities in subtropical bay ecosystems, and data from amplicon sequencing will be used to monitor and manage marine ecosystems.

The Potential Application of Natural Clinoptilolite-Rich Zeolite as Support for Bacterial Community Formation for Wastewater Treatment.

The aim of this study was to investigate the use of natural zeolite as support for microbial community formation during wastewater treatment. Scanning electron microscopy (SEM), thermal decomposition and differential thermogravimetric curves (TGA/DGT) techniques were used for the physicochemical and structural characterization of zeolites. The chemical characterization of wastewater was performed before and after treatment, after 30 days of using stationary zeolite as support. The chemical composition of wastewater was evaluated in terms of the products of nitrification/denitrification processes. The greatest ammonium (NH4+) adsorption was obtained for wastewater contaminated with different concentrations of ammonium, nitrate and nitrite. The wastewater quality index (WWQI) was determined to assess the effluent quality and the efficiency of the treatment plant used, showing a maximum of 71% quality improvement, thus suggesting that the treated wastewater could be discharged into aquatic environments. After 30 days, NH4+ demonstrated a high removal efficiency (higher than 98%), while NO3+ and NO2+ had a removal efficiency of 70% and 54%, respectively. The removal efficiency for metals was observed as follows (%): Mn > Cd > Cr > Zn > Fe > Ni > Co > Cu > Ba > Pb > Sr. Analysis of the microbial diversity in the zeolite samples indicated that the bacteria are formed due to the existence of nutrients in wastewater which favor their formation. In addition, the zeolite was characterized by SEM and the results indicated that the zeolite acts as an adsorbent for the pollutants and, moreover, as a support material for microbial community formation under optimal conditions. Comparing the two studied zeolites, NZ1 (particle size 1–3 mm) was found to be more suitable for wastewater treatment. Overall, the natural zeolite demonstrated high potential for pollutant removal and biomass support for bacteria community growth in wastewater treatment.

New insight into selective Na+ stress on acidogenic fermentation of waste activated sludge from microbial perspective: Hydrolase secretion, fermentative bacteria screening, and metabolism modification

The short-chain fatty acids (SCFAs) production was facilitated in Na+ assistant anaerobic fermentation of waste activated sludge, whereas the relevant micro-ecosystem characteristics were unclear. This work explored the microbial community and hydrolases shifts under Na+ stress. It demonstrated that the selective Na+ stress increased protease activities to 126–160% while inhibiting α-glucosidase activities to 83.1–91.3%. Correspondingly, the biodegradation rates of protein and glucose were improved from 25.6% and 45.8% to 39.0% and 55.2%, respectively. Furthermore, the microbial species richness and biodiversity gradually decreased, attributing to Na+-induced cell lysis. Selective Na+ stress was the prime inducement for microbial community evolution and promoted “SCFAs-producing” bacterial community formation by “bacteria-screening” roles. Overall, the hydrolytic bacteria and acidogens became dominant bacteria, which were resistive to Na+ stress, while the SCFAs consumers were restrained as they are salinity-sensitive. Such microbial community shift modified functional metabolisms for enhancing anaerobic fermentation performance. The pathways for metabolism and genetic information processing were improved, positively relating to the facilitated catabolism of fermentation substrates. Consequently, the mechanism of maximized SCFAs accumulation by selective Na+ stress was proposed, i.e. microbial modification of fermentation ecosystem for facilitating sludge hydrolysis and acidification with impeded methanogenesis.

Response of bacterial community structure to different ecological niches and their functions in Korean pine forests.

A healthy plant microbiome is diverse, taxonomically-structured, and gives its plant host moderate advantages in growth, development, stress tolerance, and disease resistance. The plant microbiome varies with ecological niches and is influenced by variables that are complex and difficult to separate from each other, such as the plant species, soil, and environmental factors. To explore the composition, diversity, and functions of the bacterial community of Korean pine forests, we used high-throughput sequencing to study five areas with different forest ages from June to October 2017 in northeast China. We obtained 3,247 operational taxonomic units (OTUs) based on 16S rRNA gene sequencing via an Illumina Hi-seq platform. A total of 36 phyla and 159 known genera were classified. The Shannon index of the bacterial community from the rhizospheric soil was significantly higher (p < 0.01, n = 10) than that of the root tips. Beta-diversity analysis confirmed that the bacterial community of the rhizospheric soil was significantly different (p < 0.001) from the root tips. Nine bacterial phyla were dominant (relative richness > 1%) in the rhizospheric soil, but there were six dominant phyla in the root tips. Proteobacteria was the core flora in the root tips with a relative abundance of more than 50%. It is known that the formation of bacterial communities in the rhizospheric soil or the root is mainly caused by the processes of selection, and we found a relatively high abundance of a few dominant species. We further analyzed the correlations between the bacterial community from the rhizospheric soil with that of the root tips, as well as the correlations of the bacterial community with soil physicochemical properties and climate factors. We used Functional Annotation of the Prokaryotic Tax (FAPROTAX) to predict the functions of the bacterial community in the rhizospheric soil and root tips. Five related phototrophic functions, nine nitrogen cycle functions, two related chemoheterotrophic functions, and two others were predicted. The abundance of the bacteria phyla performing relevant functions was different in the rhizospheric soil than in the root tips. These functions were significantly influenced by the contents of nitrogen, phosphorus, and potassium in the soil habitat. The bacterial composition and functions in the rhizospheric soil and root tips of Korean pine were analyzed, and the results demonstrated the importance of soil and plant species on the bacterial community in the below ground plant microbiome.

Top-down effects of protists are greater than bottom-up effects of fertilisers on the formation of bacterial communities in a paddy field soil

Communities at any trophic level along the food chain are determined by simultaneous top-down (predators) and bottom-up (nutrients) effects; however, we still lack an understanding of this concept in the soil ecosystem. Here, we aimed to reveal the contributions of the top-down and bottom-up factors on the formation of paddy field bacterial communities. The position of an indigenous bacterial community at the trophic level was centred between soil nutrients (chemical and organic fertilisers [CF and OF, respectively], i.e., bottom-up factors) and bacterial predators (phagotrophic protists, i.e., top-down factors) in a paddy field soil. A 16S rRNA gene amplicon sequencing method was used to evaluate the top-down and bottom-up effects on the bacterial community composition. The results showed that the top-down effects of protists were greater than the bottom-up effects of the applied fertilisers on the formation of bacterial communities. The presence of protists caused the formation of a distinct bacterial community by affecting several bacterial species mainly belonging to Proteobacteria and Bacteroidetes. Among the bottom-up factors, OF significantly affected the bacterial beta diversity, while CF did not. The numbers of bioindicator genera that were associated with the top-down factors were 4.4 and 3.7 times higher than those associated with the bottom effects of CF and OF, respectively. Overall, we provided unique information on the importance of protists in regulating bacterial communities in paddy field soil, which is likely to affect bacterial activities and agricultural productivity.

The bacterial composition associated with Atriolum robustum, a common ascidian from Xisha coral reef, China

Ascidians host abundant and diverse bacterial symbionts, and ascidian-associated bacteria have been shown to benefit ascidian hosts. However, these host-symbiont interactions are often overlooked in coral reef ecosystems, where ascidians frequently occur as key components. In this study, we explored the bacterial communities associated with Atriolum robustum, a common ascidian from Xisha coral reef, China, using Illumina HiSeq high-throughput sequencing of the 16S rRNA gene amplicon. A total of 1411 OTUs were identified from A. robustum, revealing a high bacterial diversity with a Shannon index of 6.26 ± 1.04. Proteobacteria (in particular Alphaproteobacteria and Gammaproteobacteria) were dominant in A. robustum, followed by Bacteroidetes and Chloroflexi. Ten OTUs comprised the core microbiome of A. robustum, matching taxa with reported capabilities for heavy metal resistance, nutrient cycling, and defense against pathogens. Predictive metabolic profiles of the bacterial community associated with A. robustum, using Tax4Fun, showed a high abundance of genes involved in carbohydrate metabolism and amino acid metabolism. A comparison of the bacterial composition and predictive functions associated with A. robustum and other reported ascidians, suggested that horizontal transmission played a key role in the formation of bacterial communities in A. robustum. It was found that A. robustum from Xisha coral reef harbored a great diversity of bacteria, and bacterial symbionts had a potential functional role in metabolism and in the immune response of their ascidian host, and so played a beneficial role in maintaining the health of the coral reef ecosystem.

Testosterone regulates the intracellular bacterial community formation of uropathogenic Escherichia coli in prostate cells via STAT3

BackgroundUPEC can internalize clonally in prostate to form biofilm-like intracellular bacterial communities (IBCs) for recurrent or chronic infection. We previously indicated that the exposure of prostate cells to testosterone could suppress UPEC invasion and their persistent survival within cells by effectively inhibiting the JAK/STAT1 signaling pathway. However, the regulatory mechanism by which testosterone affects UPEC-induced prostatitis via STAT3, another latent transcription factor signaling pathway is still unclear. The present study aimed to clarify the role of STAT3 in the process of UPEC-induced inflammation and colonization in prostate epithelial cells. MethodsThe effects of testosterone-mediated inhibition were compared between the prostatitis by different UPEC strains (CFT073 and J96) through the specific GFP-UPEC-infected prostate cell model. Fluorescence microscopy was used for UPEC IBCs detection and quantifying, and Flow cytometry, RT-PCR and western blotting were used for analyzing related gene and protein expressions. Pretreatment of JAK and STAT3 inhibitors were also applied to verify the regulation of transduction pathway in testosterone-mediated anti-UPEC infection. ResultsThis study revealed that testosterone effectively suppresses UPEC infection and IBC formation in prostate cells through the JAK/STAT3 pathway. The results show that CFT073 and J96 UPEC infection rates and colony numbers were dose-dependently reduced in RWPE-1 cells pretreated with 5 and 20 μg/mL testosterone at 0 and 24 h post-infection. Further, testosterone reduced the amounts of UPEC infecting and surviving within the prostate cells, as well as suppressed the size of IBCs formed. We demonstrated that pretreating testosterone effectively inhibited UPEC infection along with dose-dependent suppression of STAT3 and the phosphorylated-STAT3 expression in prostate cells, especially in 24 h J96 UPEC infected groups. The STAT inhibitor, SOCS3 also up-regulated at the same time. In addition, we pretreated the JAK1 or STAT3 inhibitor with testosterone to block the signaling transduction before CFT073 and J96 UPEC infection, and found the significant restoring in both the sizes of IBCs and bacterial numbers in RWPE-1 cells. Therefore, our results suggest that the suppression of STAT3 by testosterone treatment attenuate UPEC growing within IBCs and interfere with their infection to prostate cells. ConclusionsOverall, our study demonstrates that testosterone suppresses the initial infection of prostate epithelial cells by UPEC and reduces the survival of UPEC within IBCs after infection. These results indicate a critical role for STAT3 in facilitating UPEC infection and persistence, and its participation in driving testosterone-suppressive responses in prostate epithelial cells. In conclusion, this study suggests that testosterone may be beneficial in treating clinically recurrent UPEC infections and, thus, the persistent recurrence of prostatic inflammation.

Effect of carbon source on pollutant removal and microbial community dynamics in treatment of swine wastewater containing antibiotics by aerobic granular sludge

Aerobic granular sludge sequencing batch reactor (AGSBR) is a promising approach for wastewater treatment. In the paper, the effects of methanol, starch and sucrose as carbon sources on the treatment of swine wastewater (SW) containing antibiotics by aerobic granular sludge (AGS) were studied. The results revealed that the carbon sources could affect the morphology, biomass, and settleability of AGS, and AGS could maintain a better sludge performance when sucrose was used as carbon source. The pollutants (ammonium nitrogen (NH+ 4-N), organic matter and total phosphorus (TP)) in SW also had a good removal effect, and the removal rates reached 81.14%, 96.83% and 97.37% respectively. The removal efficiencies of tetracycline (TC) and oxytetracycline (OTC) from SW were the best when sucrose as co-metabolic matrix by microorganisms. The analysis of miseq pyrosequencing demonstrated that carbon sources with methanol, starch and sucrose improved the diversity of microbial community in AGS, and the dominant bacteria also changed. The dominant groups involved in TC and OTC, removal at different classification levels suggested that the formation of bacterial communities was determined by carbon sources.

Effect of the total fraction of Bacillus subtilis GM5 lipopeptides on the growth parameters and formation of the bacterial microbiota of broiler chickens

Intestinal microbes play a key role in the energy metabolism of broiler chickens, participate in the development of the gastrointestinal tract, including the regulation of intestinal epithelial proliferation, vitamin synthesis and ion absorption, fermentation of carbohydrates and proteins, biotransformation of bile acids, protection from pathogens and modulation of the immune system. Metagenomic analysis of the gastrointestinal microbiota allows to find approaches to improve the growth and productivity of chickens by introducing a diet based on beneficial bacterial strains or their secondary metabolites. In this paper, we studied the effect of the total fraction of Bacillus subtilis GM5 lipopeptides on the growth parameters and formation of bacterial communities in the caecum of cross Cobb 500 broiler chickens. It was found that the addition of bacillary lipopeptides to the feed resulted in an increase in chicken weight by 12.7% and a decrease in feed conversion by 6.36% compared to the control (P &lt; 0.05). It was also shown that the introduction of a feed additive in the form of a lipopeptide fraction modulates the structure of the bacterial microbiota of the caecum of chickens. Thus, the proportion of classes Bacteroidia, Negativicutes, Betaproteobacteria, Epsilonproteobacteria, Deltaproteobacteria, Synergistia in the caecal microbiota of chickens of the experimental group increases, and the proportion of Clostridia, Methanobacteria decreases in comparison with the control.

Characterization of bacterial communities of rhizosphere and rhizoplane of Early Zhukovsky potato

Identification of patterns of formation of bacterial communities of the rhizosphere and rhizoplane of potato (Solanum tuberosumL.), the most important agricultural crop, is necessary for the introduction and maintenance of sustainable organic farming. The purpose of this work was the study of the biodiversity of the bacterial microbiota of the rhizosphere and rhizoplane of Early Zhukovsky potato, cultivated on gray forest soils. Comparative analysis based on sequencing of the 16S R RNA gene showed a significant difference in the representation of different groups of bacteria in these potato root compartments. Thus, the proportions of the dominant bacteria in the rhizosphere and rhizoplane of theProteobacteriaphylum reach 47.66% ± 7.22 % and 86.35 % ± 0.53%, respectively (P&lt; 0.05). In contrast, the representation of phylumBacteroidetesandFirmicutesin the rhizosphere is significantly higher and reaches 41.45 % ± 10.42% and 6.49 % ± 3.23%, respectively, compared to the rhizoplane (7.84 % ± 1.24 % and 0.43 % ± 0.48 %, (P&lt; 0.05). At the same time,Actinobacteriaphylum bacteria are present in both compartments in approximately equal amounts (4.40 % ± 1.81% in the rhizosphere and 5.37 % ± 1.42% in the rhizoplane). Thus, it was found that potato forms different bacterial communities in the rhizosphere and rhizoplane in quantitative proportions, which is probably determined by the functional role of these microorganisms in the plant physiology.

Growth Recovery Assay and FACS-based Population Sorting Following Territorial Exclusion in Proteus mirabilis.

Many bacteria take part in self recognition and kin discrimination behavior using contact-dependent effectors. Understanding the effects these effectors cause is important to explain bacterial community formation and population dynamics. Typically, kin discrimination effectors are toxins that kill target cells; their effect is therefore obvious and easily measurable. However, many self-recognition effectors, such as the Proteus mirabilis Ids system, are non-lethal and do not cause obvious physiological changes in target cells. Previously, experimental techniques to probe cells experiencing non-lethal kin recognition have been limited. Here we describe a technique to reliably isolate cells deemed self and non-self through Ids self-recognition for downstream phenotypic analysis. Liquid cultures of fluorescently labeled self-recognition mutants are mixed together and inoculated on swarm-permissive agar. Mixed swarms are harvested, and each strain is isolated through fluorescence-activated cell sorting (FACS). The growth rate of each strain is measured on a plate reader. This protocol is adaptable for other bacterial species. We describe briefly how sorted particles can be used for other analyses such as RNA-Seq library preparation.

Occurrence and Succession of Bacterial Community in O3/BAC Process of Drinking Water Treatment.

In the drinking water industry, a common advanced treatment process is comprised of treatment with ozone, followed by biological-activated carbon (O3/BAC). However, the bacterial community formation and succession procedures associated with activated carbon have rarely been reported. In this study, the dynamics of bacterial communities at three different depths were investigated using a pilot-scale O3/BAC filter. The average chemical oxygen demand (CODMn), turbidity removal and dissolved oxygen (DO) consumption rate of the filter were 26.43%, 16.57% and 16.4% during the operation period, respectively. Bacterial communities dominated by proteobacteria and Bacteroidetes attached on activated carbon were determined by polymerase chain reaction-density gradient gel electrophoresis (PCR-DGGE). Principal component analysis (PCA) revealed that the compositions and structures of bacterial communities in different layers clustered after fluctuation. A redundancy analysis (RDA) indicated that Ramlibacter henchirensis was positively correlated to chemical oxygen demand (CODMn) removal and nitrate-N removal, and Georgfuchsia toluolica also showed a positive correlation with CODMn removal. Aquabacterium parvum and Phaeobacterium nitratireducens were positively-correlated with turbidity removal. Pedobacter glucosidilyticus and Pseudomonas sp. were associated with high dissolved oxygen (DO) consumption. These results provide insight into the succession characteristics of the bacterial community of O3/BAC treatment and the interactions of the bacterial community with filter operation performance.

Colonization Characteristics of Bacterial Communities on Plastic Debris Influenced by Environmental Factors and Polymer Types in the Haihe Estuary of Bohai Bay, China.

The colonization characteristics of bacterial communities on microplastics or plastic debris (PD) have generated great concern in recent years. However, the influence of environmental factors and polymer types on the formation of bacterial communities on PD in estuarine areas is less studied. To gain additional insights, five types of PD (polyvinyl chloride, polypropylene, polyethylene, polystyrene, and polyurethane) were exposed for three-time periods (two weeks, four weeks, and six weeks) in the Haihe Estuary. 16S rRNA gene sequencing was used to identify the bacterial communities on PD, in seawater, and in sediment samples. The results indicate that the average growth rate of a biofilm is affected by nutrients (total nitrogen and total phosphorus) and salinity. Furthermore, salinity is the primary factor affecting bacterial diversity of the colonies on PD. In addition, genera of bacteria show selectivity toward the PD polymer type and tend to colonize their preferred substrate. Compared with seawater and sediment, PD could be carriers for enrichment of Vibrio in the estuarine environment with salinity ≥26 (± 2‰), which might increase the ecological risk of PD in marine environments.

Biofilm Resistant Surfaces and Coatings on Implants: A Review

Abstract The study of microbes in and around us that have a drastic affect on human health plays a vital role in medicine. Bacterial infections kill millions of people in the world. The structured formation of bacterial communities, known as biofilms, is the major cause of bacterial infections. Nosocomial infections are caused by biofilms due to their pathogenic nature. Biofilms contribute about 80% and 65% to chronic and microbial infections respectively. The adhesion of bacteria to implant surface is the source of biofilm formation. Therefore, the surface characteristics of the implant material dictate the host cells association and response. Biofilms are resistant to antibiotics, disinfectants, and the human immune system. Implants surface modifications play a vital role in improving their biocompatibility and anti-infection properties. Providing antibacterial and adhesion resistant surface coating acts as a novel approach to combat biofilms. This review presents the process of biofilm formation on different implants and the next generation of surface modification techniques to enhance biocompatibility and antimicrobial functionality using surface engineering and nanobiotechnology..

Risk assessment and biofilm formation of bacterial communities associated with drinking water distribution system

Risk assessment and biofilm formation of bacterial communities associated with drinking water distribution system

Spatial Pattern of Bacterial Community Diversity Formed in Different Groundwater Field Corresponding to Electron Donors and Acceptors Distributions at a Petroleum-Contaminated Site

The benefits of an electron-transfer mechanism for petroleum biodegrading have been widely acknowledged, but few have studied the spatial pattern of microbial community diversity in groundwater fields, and few discuss the bacterial community’s diversity in relation to electron donors-acceptors distribution, which is largely determined by groundwater flow. Eleven samples in different groundwater fields are collected at a petroleum-contaminated site, and the microbial communities are investigated using 16S rRNA gene sequences with multivariate statistics. These are mainly linked to the chemical composition analysis of electron donor indexes COD, BTEX and electron acceptor indexes DO, NO3−, Fe2+, Mn2+, and SO42−, HCO3−. The spatial pattern of the bacterial community’s diversity is characterized and the effect of the electron redox reaction on bacterial community formation in different groundwater field zones is elucidated. It is found that a considerable percentage (&gt;65%) of the bacterial communities related to petroleum degrading suggest that petroleum biodegrading is occurring in groundwater. The communities are subject to the redox reaction in different groundwater field zones: The side plume zone and the upstream of the source zone are under aerobic redox or denitrification redox, and the corresponding bacteria are Rhodoferax, Novosphingobium, Hydrogenophaga, and Comamonas; the source zone and downstream of the source zone are under Fe3+, Mn4+, and SO42− reduction redox, and the corresponding bacteria are Rhodoferax, Treponema, Desulfosporosinus, Hydrogenophaga, and Acidovorax. These results imply that groundwater flow plays a definitive role in the bacterial community’s diversity spatial pattern formation by influencing the distribution of electron donor and acceptor.