Five-membered Heterocycles Research Articles

Evaluation of genotoxicity of (4-fluorophenyl) thiazolidin-4-one in CHO-K1 cells

4-thiazolidinones are five-membered heterocyclic ring compounds with diverse pharmacological impacts. In a previous study, we reported a series of newly synthesized derivatives of 4-thiazolidinones with different functional groups, which exhibited anticancer activity against ovarian (SKOV3) and cervical (HeLa) cancer cell lines. Among these derivatives, (4-fluorophenyl) thiazolidin-4-one (4-TH) demonstrated potent cytotoxic activity against SKOV3, with an IC50 value of 12.3 μM. However, it was also found to be extremely toxic to normal cells (CHO-K1) with an IC50 of 7.5 μM. Before considering its use in cancer research, it is crucial to gain a comprehensive understanding of its potential genotoxic effects on normal cells. In this study, we aimed to assess the in vitro cytogenetic toxicity of 4-TH using normal Chinese hamster ovary cells (CHO-K1). Referring to the IC50 of 4-TH, we selected three sub-lethal concentrations (2, 5, and 7.5 μM) and treated CHO-K1 cells for 24 h (one cell cycle duration) to estimate its dose-dependent induction of chromosome aberrations, and examine the effect of 4-TH on cell division, micronucleus induction potential and cell cycle arrest properties following standard protocols. The results showed that 4-TH was highly toxic to normal cells, as all three sublethal concentrations caused a statistically significant increase in the number of chromosomal aberrations (P < 0.001), formation of micronuclei (P < 0.01), and changes in the rate of cell division (mitotic index) (P < 0.05) compared to control. In addition, there was a significant increase in the number of cells in the G1 phase, indicating that all concentrations of 4-TH tested induced apoptosis. The evaluation of the cytotoxic, clastogenic, and aneugenic properties of 4-TH, a potent cytotoxic agent, will undoubtedly provide critical information for determining its safety and potential as an anticancer drug.

Cobalt-Catalyzed Chemo- and Stereoselective Arylative Carbocyclization of 1,6-Allenynes.

Different from the well-investigated enynes, transition-metal-catalyzed carbocyclization reactions of allenynes are more attractive as a result of the unique structure and versatile reactivity of allenes. Herein, we report the first cobalt-catalyzed highly chemo- and stereoselective arylative carbocyclization of 1,6-allenynes with arylboronic acids, affording five-membered carbocycles and heterocycles with moderate to high yields, broad substrate scope, and wide functional group compatibility. Moreover, several mechanistic experiments were conducted to gain insight into the reaction process.

Significance of Five-Membered Heterocycles in Human Histone Deacetylase Inhibitors.

Five-membered heteroaromatic rings, in particular, have gained prominence in medicinal chemistry as they offer enhanced metabolic stability, solubility and bioavailability, crucial factors in developing effective drugs. The unique physicochemical properties and biological effects of five-membered heterocycles have positioned them as key structural motifs in numerous clinically effective drugs. Hence, the exploration of five-ring heterocycles remains an important research area in medicinal chemistry, with the aim of discovering new therapeutic agents for various diseases. This review addresses the incorporation of heteroatoms such as nitrogen, oxygen and sulfur into the aromatic ring of these heterocyclic compounds, enhancing their polarity and facilitating both aromatic stacking interactions and the formation of hydrogen bonds. Histone deacetylases are present in numerous multiprotein complexes within the epigenetic machinery and play a central role in various cellular processes. They have emerged as important targets for cancer, neurodegenerative diseases and other therapeutic indications. In histone deacetylase inhibitors (HDACi's), five-ring heterocycles perform various functions as a zinc-binding group, a linker or head group, contributing to binding activity and selective recognition. This review focuses on providing an up-to-date overview of the different five-membered heterocycles utilized in HDACi motifs, highlighting their biological properties. It summarizes relevant publications from the past decade, offering insights into the recent advancements in this field of research.

Chemical insights into the synthetic chemistry of five-membered saturated heterocycles-a transition metal-catalyzed approach.

Drug design and delivery is primarily based on the hunt for new potent drug candidates and novel synthetic techniques. Recently, saturated heterocycles have gained enormous attention in medicinal chemistry as evidenced by the medicinal drugs listed in the FDA Orange Book. Therefore, the demand for novel saturated heterocyclic syntheses has increased tremendously. Transition metal (TM)-catalyzed reactions have remained the prime priority in heterocyclic syntheses for the last threedecades. Nowadays, TM catalysis is well adorned by combining it with other techniques such as bio- and/or enzyme-catalyzed reactions, organocatalysis, or using two different metals in a single catalysis. This review highlights the recent developments of the transition metal-catalyzed synthesis of five-membered saturated heterocycles.

Preparation of chitosan derivatives containing aromatic five-membered heterocycles for efficient antimicrobial and antioxidant activities

In this study, nine chitosan derivatives containing aromatic five-membered heterocycles were prepared and the effects of different grafting methods on the biological activities of chitosan derivatives were investigated. The structures of all the compounds were characterized by Fourier Transform Infrared (FT-IR) spectroscopy and Nuclear Magnetic Resonance (NMR) spectroscopy, while the antioxidant, antifungal and antibacterial activities of the chitosan derivatives were tested. The experimental data suggested that the chitosan derivatives had outstanding inhibitory ability against Fusarium graminearum, Fusarium oxysporum f.sp.cucumbrum, Staphylococcus aureus and Escherichia coli. At the same time, some of the compounds showed strong scavenging ability against DPPH radical and superoxide radical. Cytotoxicity experiments have demonstrated that some chitosan derivatives are non-toxic to L929 cells. More importantly, compared to chitosan, these chitosan derivatives have good water solubility and can be used as potential polymers for antifungal and antibacterial biomaterials in agriculture.

Nucleobase and Linker Modification for Triple-Helical Recognition of Pyrimidines in RNA Using Peptide Nucleic Acids.

Triple-helical recognition of any sequence of double-stranded RNA requires high affinity Hoogsteen hydrogen binding to pyrimidine interruptions of polypurine tracts. Because pyrimidines have only one hydrogen bond donor/acceptor on Hoogsteen face, their triple-helical recognition is a formidable problem. The present study explored various five-membered heterocycles and linkers that connect nucleobases to backbone of peptide nucleic acid (PNA) to optimize formation of X•C-G and Y•U-A triplets. Molecular modeling and biophysical (UV melting and isothermal titration calorimetry) results revealed a complex interplay between the heterocyclic nucleobase and linker to PNA backbone. While the five-membered heterocycles did not improve pyrimidine recognition, increasing the linker length by four atoms provided promising gains in binding affinity and selectivity. The results suggest that further optimization of heterocyclic bases with extended linkers to PNA backbone may be a promising approach to triple-helical recognition of RNA.

Density Functional Theory Study of the Secondorder Nonlinear Optical Properties of Novel Fluorenone Derivatives

Based on the molecular structure of novel fluorenone derivative named FO52, a series of new molecules have been designed by extending its π-conjugated bridge and introducing electron donor or acceptor substituents. The electronic transition and second-order non-linear optical response properties of these fluorenone derivatives were theoretically studied in detail by using the density functional theory computational methods. The results showed that the non-linear optical response of the molecule FO52 can be improved by introducing five-membered heterocycles into its skeleton structure. In addition, the introduction of strong substituents results in significant enhancement of the first hyperpolarizability of molecular nonlinear optical properties. These fluorenone derivatives could be treated as excellent candidates for nonlinear optical materials due to the narrow energy gap of its frontier molecular orbitals, distinct intramolecular charge transfer character and large first hyperpolarizabilities

Synthesis, Structure, and Spectroscopy of the Biscarboranyl Stannylenes (bc)Sn·THF and K2[(bc)Sn]2 (bc = 1,1'(ortho-Biscarborane)) and Dibiscarboranyl Ethene (bc)CH=CH(bc).

Two compounds containing a Sn(II) atom supported by a bidentate biscarborane ligand have been synthesized via salt metathesis. The synthetic procedures for (bc)Sn·THF (bc = 1,1' (ortho-carborane) (1) and K2[(bc)Sn]2 (2) involved the reaction of K2[bc] with SnCl2 in either a THF solution (1) or in a benzene/dichloromethane solvent mixture (2). Using the same solvent conditions as those used for 2 but using a shorter reaction time gave a dibiscarboranyl ethene (3). The products were characterized by 1H, 13C, 11B, 119Sn NMR, UV-vis, and IR spectroscopy, and by X-ray crystallography. The diffraction data for 1 and 2 show that the Sn atom has a trigonal pyramid environment and is constrained by the bc ligand in a planar five-membered C4Sn heterocycle. The 119Sn NMR spectrum of 1 displays a triplet of triplets pattern signal, which is unexpected given the absence of a Sn-H signal in the 1H NMR, IR spectrum, and X-ray crystallographic data. However, a comparison with other organotin compounds featuring a Sn atom bonded to carboranes reveal similar multiplets in their 119Sn NMR spectra, likely arising from long-range nuclear spin-spin coupling between the carboranyl 11B and 119Sn nuclei. Compound 3 displays structural and spectroscopic characteristics typical of conjugated alkenes.

Synthetic approaches and applications of an underprivileged 1,2,5-oxadiazole moiety: A review.

1,2,5-oxadiazole belongs to five-membered heterocyclic compounds with two nitrogen and one oxygen atom. In comparison with other heterocyclic moieties, 1,2,5-oxadiazoles moiety is considered as underprivileged as it attracted little attention of the researchers although lot of scopes and possible applications in medicinal, material and agriculture science. 1,2,5-oxadiazole and its derivatives have been reported as good pharmacophores as carbonic anhydrase inhibitors, antibacterial, vasodilating agents, antimalarial, anticancer, etc. In the presented manuscript, we reviewed granted patents and different synthetic strategies which have been reported for the synthesis of 1,2,5-oxadiazoles such as cycloaddition, dimerization, cyclodehydration, condensation, thermolysis, nitration, oxidation and ring-conversion. These synthetic methods have also been analysed for their merits and demerits. The manuscript also highlighted various applications of 1,2,5-oxadiazole and its derivatives. We hope that researchers across the scientific streams will be benefitted from the presented review articles for designing their work related to 1,2,5-oxadiazoles.

Recent Advances in the Microwave and Ultrasound-Assisted Synthesis of Pyrazole Scaffolds

Abstract: Pyrazoles are well-known five-membered heterocyclic compounds and are found in a wide variety of synthetic and natural compounds. Compounds carrying pyrazole scaffolds exhibit a wide range of biological activities such as anticancer, antimicrobial, anticonvulsant, antioxidant, analgesic and anti-inflammatory effects. Pharmaceuticals with many different activities in the pyrazole structure are currently on the market (e.g., celecoxib, lonazolac, tepoxalin, rimonabant, pyrazofurin, epirizole). The pyrazole ring contains the N-N double bond, which is thought to have a key role in biological activity, and compounds with this bond are difficult to produce by organisms, so their relative abundance is very low in nature. For this reason, many studies have been carried out on this structure and it has been revealed that the structure has a unique effect spectrum. Microwave-assisted synthesis has opened up some new opportunities compared to conventional synthesis. It is possible to use less solvent and reduce processing time with microwave synthesis. In addition, better selectivity and thermal stability are provided by microwave synthesis. Ultrasound-assisted synthesis is often used to enhance conventional solvent extraction, while microwaves reveal bioactive compounds by heating without any solvent. In the traditional method of pyrazole synthesis; polar solvents, acidic and basic catalysts are needed in large quantities in the synthesis of pyrazole scaffolds. This review aims to summarize the recent advancements in the synthesis methods of a pyrazole ring with non-traditional methods. Therefore this article will provide readers with a new perspective on the synthesis of pyrazole scaffolds as an environmentally friendly alternative.

Theoretical Investigation of Electron Impact Scattering on Imidazole.

This study presents the results of electron scattering calculations on a biologically important molecule, imidazole, using the UK molecular R-matrix method. The R-matrix calculations are performed using SE, SEP, and CC models, and the resonance detected in the present SEP model is found to be in better agreement with available experimental data than previous theoretical data. The study also reports an inelastic scattering cross section, which comprises dissociative electron attachment (DEA), excitation, and ionization cross section, for the first time. The total scattering cross sections are also reported for the first time. We confirm the presence of the two well-known π* shape resonances predicted earlier experimentally. Due to the scarcity of total scattering cross section (TCS) data for imidazole, we have compared the TCS of imidazole with its isoelectronic target isoxazole and drawn important conclusions. A comparison among the resonances of imidazole with those of isoxazole helps us to conclude that electron attachment to π* molecular orbitals is a general feature displayed by these five-membered heterocyclic compounds. The comprehensive electron scattering studies presented in this work are expected to provide a deeper understanding of electron-induced biochemical processes and fill gaps in the available data. Furthermore, this study is anticipated to inspire further investigations on imidazole and other five-membered heterocyclic ring molecules, which have significant applications in medicine.

SYNTHESIS OF DIFFERENT OXADIAZOLES: A CRITICAL REVIEW

Oxadiazoles are an interesting class of five-membered heterocyclic compounds containing two atoms of nitrogen and one atom of oxygen [1]. Their lipophilicity is a key property that affects a drug's ability to arrive at the focus by trans-membrane diffusion, and their action against benign tuberculosis by inhibiting lipid biosynthesis is highly promising. This review was emphasized on the synthesis of different oxadiazoles with scheme. For the same, a detailed literature survey was done. Antimicrobial, anticonvulsant, antiepileptic, antiallergic, anticancer, anti-tubercular, and insecticidal actions are just few of the many biological effects shown by 1,3,4-oxadiazole derivatives. The Green Chemistry Program was launched in 1991 by the Environmental Protection Agency and the National Science Foundation. A joint effort between J.C. To lessen or do away with chemical dangers and environmental degradation, Warner has developed twelve key principles of green chemistry. It is necessary to create new medications for the treatment of pain and inflammation without the frequent adverse effects of NSAIDs (gas, bloating, heartburn, ulcer, stomach discomfort). In conclusion, the oxadiazole derivatives are more effective than nonsteroidal anti-inflammatory drugs (NSAIDs) in treating pain and inflammation-induced arthritis. The compounds of 1,3,4-oxadiazole were synthesized using microwave assistance technique.

Practical synthesis of 1,3-benzoazaphosphole analogues.

Despite the promising pharmacological activity and material properties of five-membered heterocyclic compounds containing phosphorus and nitrogen, synthetic examples of them have been rather limited due to the instability of phosphorus toward air and water. In this study, 1,3-benzoazaphosphol analogues were selected as target molecules, and various synthetic routes were examined to establish a fundamental technology for the introduction of phosphorus groups into aromatic rings and formation of five-membered rings containing phosphorus and nitrogen by cyclization. As a result, we found that 2-aminophenyl(phenyl)phosphine is an extremely promising synthetic intermediate with high stability and easy handling. Furthermore, 2-methyl-3-phenyl-2,3-dihydro-1H-benzo[d][1,3]azaphosphole and 3-phenyl-2,3-dihydro-1H-benzo[d][1,3]azaphosphole-2-thione as synthetically useful 1,3-benzoazaphosphol analogues were successfully synthesized by using 2-aminophenyl(phenyl)phosphine as a key intermediate.

Molecular design and theoretical study of oxadiazole-bifurazan derivatives.

The design and synthesis of new high energy density materials is an important part of the research in the field of high energy materials. However, the synthesis of high-energy materials is very difficult and dangerous. Therefore, it is necessary to design the compounds in advance and evaluate the performance of the designed compounds, so as to screen the high-energy candidate compounds with excellent performance and provide reference for future synthesis and application. 1,2,5-oxadiazole (furazan) and 1,2,4-oxadiazole are five-membered nitrogen-oxygen heterocycles. Because their structures contain high-energy N-O, C=N bonds, they can effectively improve the energy density and oxygen balance of compounds, which has attracted widespread attention. In this paper, 42 kinds of oxadiazole-bifurazan energetic derivatives were designed by inserting different functional groups and changing the parent bridging groups with 1,2,4-oxadiazole and furazan as the basic structural units. Their electronic structures, aromaticity, heats of formation (HOFs), detonation properties, thermodynamic properties and electrostatic potential were systematically studied by density functional than theory (DFT). The results show that -C (NO2)3 has the greatest improvement effect on HOFs among all the substituent groups. The detonation performance of -N=N- bridged oxadiazole-bifurazan derivatives is better than that of -NH-NH- bridged derivatives. And -C(NO2)3 is the most effective group to improve the detonation performance and density of compounds. Compared with the parent compounds, when a -C(NO2)3 was introduced, the density increased by about 5.5%. A6 (D = 10.30 km·s-1, P = 48.86 GPa) and D6 (D = 9.57 km·s-1, P = 42.31 GPa) are the compounds with the best D and P among the designed compounds, which are higher than RDX and HMX, and are potential candidates for new high-energy materials. With the help of Gaussian16 software and Multiwfn 3.8 package, the B3LYP method in density functional theory was selected. The 6-311G (d, p) basis set was used to optimize the structure of the 42 derivatives, and the high-precision def2-TZVPP basis set was used to calculate the energy.

(3+2)-Cyclization Reactions of Unsaturated Phosphonites with Aldehydes and Thioketones.

By exploiting the unique reactivity of ethynyl-phosphonites we obtain novel P(V)-containing five-membered heterocycles via (3+2)-cyclization reactions with aldehydes or cycloaliphatic thioketones in satisfactory to excellent yields. Whereas reactions with thioketones to yield 1,3-thiaphospholes-3-oxides occur smoothly at room temperature with equimolar amounts of the starting materials in absence of any catalyst, the analogous conversions with aldehydes to generate 3-oxides of 1,3-oxaphospholes require addition of triethylamine as a base. We postulate a step-wise (3+2)-cyclization mechanism for the formation of the 1,3-thiaphosphole ring based on DFT quantum chemical calculations. With this study, we introduce new cyclization reactions originating from unsaturated phosphonites as central synthetic building blocks to yield previously inaccessible stable phosphorus-containing heterocycles with unexplored potential for the molecular sciences.

Oxidase Heterotetramer Completes 1-Azabicyclo[3.1.0]hexane Formation with the Association of a Nonribosomal Peptide Synthetase.

Ficellomycin, azinomycins, and vazabitide A are nonribosomal peptide natural products characterized by an amino acid unit that contains a similar 1-azabicyclo[3.1.0]hexane (ABCH) pharmacophore. This unit is derived from diamino-dihydroxy-heptanic acid (DADH); however, the process through which linear DADH is cyclized to furnish an ABCH ring system remains poorly understood. Based on the reconstitution of the route of the ABCH-containing unit by blending genes/enzymes involved in the biosynthesis of ficellomycin and azinomycins, we report that ABCH formation is completed by an oxidase heterotetramer with the association of a nonribosomal peptide synthetase (NRPS). The DADH precursor was prepared in Escherichia coli to produce a conjugate subjected to in vitro enzymatic hydrolysis for offloading from an amino-group carrier protein. To furnish an aziridine ring, DADH was processed by C7-hydroxyl sulfonation and sulfate elimination-coupled cyclization. Further cyclization leading to an azabicyclic hexane pharmacophore was proved to occur in the NRPS, where the oxidase heterotetramer functions in trans and catalyzes α,β-dehydrogenation to initiate the formation of a fused five-membered nitrogen heterocycle. The identity of ABCH was validated by utilization of the resultant ABCH-containing unit in the total biosynthesis of ficellomycin. Biochemical characterization, crystal structure, and site-specific mutagenesis rationalize the catalytic mechanism of the unusual oxidase heterotetramer.

Straightforward Creation of Possibly Prebiotic Complex Mixtures of Thiol-Rich Peptides.

At the origin of life, extremely diverse mixtures of oligomers and polymers could be obtained from relatively simple molecular bricks. Here, we present an example of the polymerization of two amidonitriles derived from cysteine, Cys-Ala-CN and Cys-Met-CN. The thiol function in a molecule adds onto the nitrile group of another one, allowing efficient condensation reactions and making available an extensive range of polymers containing amide bonds and/or five-membered heterocycles, namely thiazolines. Macrocycles were also identified, the biggest one containing sixteen residues (cyclo(Cys-Met)8). MALDI-TOF mass spectrometry was used to identify all the present species. What these examples show is that complex mixtures are likely to have formed on the primitive Earth and that, ultimately, the selection that must have followed may have been an even more crucial step towards life than the synthesis of the pre-biological species themselves.

Recent advances of benzimidazole as anticancer agents.

Cancer is the second leading cause of death globally, with 9.6 million deaths yearly. As a life-threatening disease, it necessitates the emergence of new therapies. Resistance to current chemotherapies drives scientists to develop new medications that will eventually be accessible. Because heterocycles are so common in biological substances, compounds play a big part in the variety of medications that have been developed. The "Master Key" is the benzimidazole nucleus, which consists of a six-membered benzene ring fused with a five-membered imidazole/imidazoline ring, which is an azapyrrole. One of the five-membered aromatic nitrogen heterocycles identified in American therapies that have been approved by the Food and Drug Administration (FDA). Our results show that benzimidazole's broad therapeutic spectrum is due to its structural isosteres with purine, which improves hydrogen bonding, electrostatic interactions with topoisomerase complexes, intercalation with DNA, and other functions. It also enhances protein and nucleic acid inhibition, tubulin microtubule degeneration, apoptosis, DNA fragmentation, and other functions. Additionally, readers for designing the more recent benzimidazole analogues as prospective cancer treatments.

Novel Benzo Five-Membered Heterocycle Derivatives as P-Glycoprotein Inhibitors: Design, Synthesis, Molecular Docking, and Anti-Multidrug Resistance Activity.

A proposed strategy to overcome multidrug resistance (MDR) of anticancer drugs in chemotherapy is to disable the efflux function of P-glycoprotein (P-gp). In this study, based on ring-merging and fragment-growing strategies, 105 novel benzo five-membered heterocycle derivatives were designed, synthesized, and screened. Exploration of the structure-activity relationship (SAR) led to the identification of d7 with low cytotoxicity and promising reversal activity to doxorubicin in MCF-7/ADR cells. Furthermore, the mechanism studies revealed that the reversal activity of d7 stemmed from the inhibition of P-gp efflux. Molecular docking further clarified the observed trends in SAR with d7 displaying potent affinity to P-gp. Additionally, coadministration of d7 with doxorubicin achieved stronger antitumor activity in a xenograft model than doxorubicin alone. These results suggest that d7 is a potential MDR reveal agent acting as a P-gp inhibitor and provides guidelines for the future development of new P-gp inhibitors.

Cytotoxic activity of unique synthesized five-membered heterocyclic compounds coordinated with tiopronin monovalent.

We recently synthesized a compound in which 5-mercapto-1-methyltetrazole (MM4) was coordinated to tiopronin monovalent (TPN-Au(Ⅰ)) and reported its cytotoxic activity against human leukemia cells in vitro. Objective: We further synthesized other heterocyclic compounds coordinated with TPN-Au(Ⅰ) and assessed their cytotoxic activity against hepatocellular carcinoma HepG2 and lung cancer cell line H1299 in vitro. Seven kinds of compounds were synthesized by introducing a five-membered heterocyclic compound into TPN-Au(Ⅰ). The number of viable cells was counted by a trypan blue dye exclusion assay. Fluorescence conjugated-Annexin V and propidium iodide were used for the apoptosis analysis. Seven compounds were successfully synthesized. Among these compounds, TPN-Au(Ⅰ)-MTZ (3-mercapto-1,2,4-triazole), TPN-Au(Ⅰ)-MMT (2-mercapto-5-methyl-1,3,4-thiadiazole), and TPN-Au(Ⅰ)-MMTT (2-mercapto-5-methylthio-1,3,4-thiadiazole) effectively suppressed the proliferation and induced apoptosis in HepG2 cells. In addition, TPN-Au(Ⅰ)-MMTT and TPN-Au(Ⅰ)-MMT also showed effective cytotoxicity against H1299 cells. Conclusion: The present results showed that introduction of some five-membered heterocyclic compounds, especially MMT and MMTT, to TPN-Au(Ⅰ) improved the cytotoxicity against solid cancer cells.