Abstract Probabilistic safety assessment (PSA) has been applied to evaluate the safety of nuclear reactor systems. The results of PSA are used by designers, utilities and regulatory body to confirm the reactor design, to change operation procedures, to enhance the reliability of safety systems, or to modify regulation. Fault tree analysis (FTA) has been used as a deductive means for PSA. System components are assumed to always have defined failure probabilities; however, in reality this assumption is questionable and sometimes there is insufficient data about the failure probability of some components. To solve this problem, fuzzy approaches have been proposed and implemented. The aim of this study is to apply a fuzzy reliability algorithm to estimate basic events failure probabilities for the shutdown system of a research reactor. The reactor is a 22 MW light water open pool type material test reactor and the shutdown system is responsible for the fast shutdown of the reactor whenever safety limits are exceeded. Then, to illustrate the ability of the algorithm, the results are compared with real basic event failure probabilities. The results verify the competence of the algorithm and confirm that it can be applied as an alternative method when quantitative data are not available. Also, a risk importance measure is done on the fault tree of the shutdown system to illustrate which components need to be focused for improvements to achieve the safe operation of shutdown system.