Extinction Research Articles

Inferring the evolutionary history of the Sino-Himalayan biodiversity hotspot using a Bayesian birth-death skyline model

Abstract The current status of the Sino-Himalayan region as a biodiversity hotspot, particularly for flora, has often been linked to the uplift of the Sino-Tibetan Plateau and Himalayan and Hengduan Mountains. However, the relationship between the topological development of the region and the onset of diversification is yet to be confirmed. Here, we apply Bayesian phylodynamic methods to a large phylogeny of angiosperm species from the Sino-Himalayas, to infer changes in their evolutionary rates through time. We find strong evidence for high diversification rates in the Paleocene, late Miocene and Pliocene, and for negative diversification rates in the Quaternary, driven by an increase in extinction rates. Our analyses suggest that changes in global palaeotemperatures are unlikely to be a driving force for these rate shifts. Instead, the collision of the Indian continent with Eurasia and coeval topographic change in the Sino-Himalayas, the Miocene Grassland Expansion, and the impact of Pleistocene glaciations on this altitudinally-variable region may have driven these rates. We also demonstrate the strong influence of change time choice on the shape of inferred piecewise-constant trajectories in Bayesian phylodynamics, and advocate for the use of prior information when making this decision. Supplementary material at https://doi.org/10.6084/m9.figshare.c.7179254

Local environment and fragmentation by drought and damming shape different components of native and non-native fish beta diversity across pool refuges

Pool refuges are critical for maintaining stream fish diversity in increasingly intermittent streams. Yet, the patterns and drivers of beta diversity of native and non-native fish in pool refuges remain poorly known. Focusing on Mediterranean streams, we decomposed beta diversity of native and non-native fish into richness difference (RichDiff) and species replacement (Repl), and local (LCBD, LCBDRichDiff and LCBDRepl) and species (SCBD) contributions. We assessed the influence of environmental and spatial factors associated with drought and damming fragmentations on beta diversity components and LCBDs, and of local species richness and occupancy on LCBDs and SCBD, respectively. Overall, non-native species showed a more limited occupancy of pool refuges than native fish. RichDiff dominated beta diversity, though it was influenced by drought and damming fragmentations for native fish and local environment for non-native fish. Repl for native fish was slightly influenced by local environment, but for non-native fish was largely driven by drought and damming, albeit with a contribution of local environment as well. LCBD and LCBDRichDiff increased in pools in low order streams for native fish and at low elevations for non-native fish, and with high or low species richness. SCBD was higher for native species with intermediated pool occupancy, but for non-native species with low occupancy. Our results suggest that stream fragmentation may drive native species loss and non-native species replacement in pool refuges, and that environmental filtering may shape non-native species loss. Pools in lower order streams harbouring unique species-rich or species-poor assemblages should be prioritize for conservation and restoration, respectively, and pools at low elevation with unique non-native assemblages should deserve control efforts. We encourage the partitioning of beta diversity and individual analysis of native and non-native fish in intermittent streams, which may be key in stressing the importance of pool refuges in safeguarding native fish diversity.

Norms of Species Translocation 50 Years After the Ethic of Organic Diversity

ABSTRACT From island biogeography theory, the ethic of organic diversity was posited as a precept to guide applied biogeography. It states that humanity must act in such a way as to reduce the rate of worldwide species extinction for an indefinite period of time. Almost 50 years later, the ethic of organic diversity remains relevant in the context of the debate over species translocation practices. Ultimately, matters of biodiversity conservation are too complex to expect an exceptionless moral framework to determine whether species translocation is acceptable in every situation. Instead, individual cases should be judged based on the adequacy of their decision-making processes.

Bacterial community shifts of commercial apples, oranges, and peaches at different harvest points across multiple growing seasons.

Assessing the microbes present on tree fruit carpospheres as the fruit enters postharvest processing could have useful applications, as these microbes could have a major influence on spoilage, food safety, verification of packing process controls, or other aspects of processing. The goal of this study was to establish a baseline profile of bacterial communities associated with apple (pome fruit), peach (stone fruit), and Navel orange (citrus fruit) at harvest. We found that commercial peaches had the greatest bacterial richness followed by oranges then apples. Time of harvest significantly changed bacterial diversity in oranges and peaches, but not apples. Shifts in diversity varied by fruit type, where 70% of the variability in beta diversity on the apple carposphere was driven by the gain and loss of species (i.e., nestedness). The peach and orange carposphere bacterial community shifts were driven by nearly an even split between turnover (species replacement) and nestedness. We identified a small core microbiome for apples across and between growing seasons that included only Methylobacteriaceae and Sphingomonadaceae among the samples, while peaches had a larger core microbiome composed of five bacterial families: Bacillaceae, Geodermtophilaceae, Nocardioidaceae, Micrococcaeceae, and Trueperaceae. There was a relatively diverse core microbiome for oranges that shared all the families present on apples and peaches, except for Trueperaceae, but also included an additional nine bacterial families not shared including Oxalobacteraceae, Cytophagaceae, and Comamonadaceae. Overall, our findings illustrate the important temporal dynamics of bacterial communities found on major commercial tree fruit, but also the core bacterial families that constantly remain with both implications being important entering postharvest packing and processing.

Global mismatches between threat mapping research effort and the potential of threat abatement actions to reduce extinction risk.

Threat mapping is a necessary tool for identifying and abating direct threats to species in the ongoing extinction crisis. There are known gaps in the threat mapping literature for particular threats and geographic locations, and it remains unclear if the distribution of research effort is appropriately targeted relative to conservation need. We aimed to determine the drivers of threat mapping research effort and to quantify gaps that, if filled, could inform actions with the highest potential to reduce species' extinction risk. We used a negative binomial generalized linear model to analyze research effort as a function of threat abatement potential (quantified as the potential reduction in species extinction risk from abating threats), species richness, land area, and human pressure. The model showed that threat mapping research effort increased by 1.1 to 1.2 times per standardized unit change in threat abatement potential. However, species richness and land area were stronger predictors of research effort overall. The greatest areas of mismatch between research effort and threat abatement potential, receiving disproportionately low research effort, were related to the threats to species of agriculture, aquaculture, and biological resource use across the tropical regions of the Americas, Asia, and Madagascar. Conversely, the threat of linear infrastructure (e.g., roads and rails) across regions, the threat of biological resource use (e.g., hunting or collection) in sub-Saharan Africa, and overall threats in North America and Europe all received disproportionately high research effort. We discuss the range of methodological and sociopolitical factors that may be behind the overall trends and specific areas of mismatch we found. We urge a stronger emphasis on targeting research effort toward those threats and geographic locations where threat abatement activities could make the greatest contribution to reducing global species extinction risk.

Avian Island Radiations Shed Light on the Dynamics of Adaptive and Nonadaptive Radiation.

Understanding the mechanisms underlying species formation and differentiation is a central goal of evolutionary biology and a formidable challenge. This understanding can provide valuable insights into the origins of the astonishing diversity of organisms living on our planet. Avian evolutionary radiations on islands have long fascinated biologists as they provide the ideal variation to study the ecological and evolutionary forces operating on the continuum between incipient lineages to complete speciation. In this review, we summarize the key insights gained from decades of research on adaptive and nonadaptive radiations of both extant and extinct insular bird species. We present a new comprehensive global list of potential avian radiations on oceanic islands, based on published island species checklists, taxonomic studies, and phylogenetic analyses. We demonstrate that our understanding of evolutionary processes is being greatly enhanced through the use of genomic tools. However, to advance the field, it is critical to complement this information with a solid understanding of the ecological and behavioral traits of both extinct and extant avian island species.

Impact of anthropogenic emissions of carbon dioxide and related temperature rise on wildlife population: A modeling study

Climate change is driven by the increase in greenhouse gases in Earth’s atmosphere, especially carbon dioxide (CO2), leading to a rise in the global average temperature. This temperature rise unleash far-reaching and profound consequences on various living organisms. In this research work, we formulate a nonlinear mathematical model to perceive the impact of rising temperature on wildlife species. In formulating the model, we take into account that the escalating CO2 concentration contributes to a rise in the global average temperature, thereby impacting the growth rate of wildlife population. We pinpoint the sufficient conditions for all the dynamic variables to reach their simultaneous equilibrium levels. The model analysis reveals a spectrum of bifurcations, including transcritical, Hopf, saddle–node, and Bogdanov–Takens bifurcations. Further, the examination of transcritical bifurcation led to the identification of a critical reduction rate of wildlife species due to human activities above which the wildlife population may teeter on the brink of extinction under the considered stressor of temperature rise. This extinction of wildlife species can be avoided by increasing the carrying capacity of forest biomass. Also, we have shown that for a specific set of parameter values, there exists a bistability between the forest-wildlife free equilibrium and the coexisting equilibrium.

Halide Exchange in Perovskites Enables Bromine/Iodine Hybrid Cathodes for Highly Durable Zinc Ion Batteries.

With the increasing need for reliable storage systems, the conversion-type chemistry typified by bromine cathodes attracts considerable attention due to sizeable theoretical capacity, cost efficiency, and high redox potential. However, the severe loss of active species during operation remains a problem, leading researchers to resort to concentrated halide-containing electrolytes. Here, profiting from the intrinsic halide exchange in perovskite lattices, a novel low-dimensional halide hybrid perovskite cathode, TmdpPb2[IBr]6, which serves not only as a halogen reservoir for reversible three-electron conversions but also as an effective halogen absorbent by surface Pb dangling bonds, C─H…Br hydrogen bonds, and Pb─I…Br halogen bonds, is proposed. As such, the Zn||TmdpPb2[IBr]6 battery delivers three remarkable discharge voltage plateaus at 1.21V (I0/I-), 1.47V (I+/I0), and 1.74V (Br0/Br-) in a typical halide-free electrolyte; meanwhile, realizing a high capacity of over 336 mAh g-1 at 0.4 A g-1 and high capacity retentions of 88% and 92% after 1000 cycles at 1.2 A g-1 and 4000 cycles at 3.2 A g-1, respectively, accompanied by a high coulombic efficiency of ≈99%. The work highlights the promising conversion-type cathodes based on metal-halide perovskite materials.

Kelp forest diversity under projected end‐of‐century climate change

AbstractAimFuture climate change threatens marine forests across the world, potentially disrupting ecosystem function and services. Nonetheless, the direction and intensity of climate‐induced changes in kelp forest biodiversity remain unknown, precluding well‐informed conservation and management practices.LocationGlobal.MethodsWe use machine‐learning models to forecast global changes in species richness and community composition of 105 kelp forest species under contrasting Shared Socioeconomic Pathway (SSP) scenarios of climate change (decade 2090–2100): one aligned with the Paris Agreement and another of substantially higher emissions.ResultsA poleward and depth shift in species distributions is forecasted, translating into ~15% less area in the extent of the global biome, coupled with marked regional biodiversity changes. Community composition changes are mostly projected in the Arctic, the Northern Pacific and Atlantic, and Australasia, owing to poleward range expansions and wide low latitude losses.Main ConclusionsBy surpassing the Paris Agreement expectations, species reshuffling may simplify and impair ecosystem services in numerous temperate regions of Australasia, Southern Africa, Southern America and the Northern Atlantic, and in the tropical Pacific, where complete species losses were projected without replacement. These estimates, flagging threatened regions and species, as well as refugial areas of population persistence, can now inform conservation, management and restoration practices considering future climate change.

Implications of Climate-Induced Localised Extinction of Bull Kelp (Durvillaea amatheiae) for Holdfast Macrofauna

Globally, work is being undertaken to preserve biodiversity and prevent further species extinctions. Yet, without adequate data about the presence of species within ecosystems, hidden extinctions can occur without our knowledge. Given that poleward range retractions are projected for bull kelp (Durvillaea amatheiae) in southeastern Australia, there is the potential for hidden extinctions to occur in associated macrofaunal species. However, this risk cannot be assessed due to the limited data on the invertebrate macrofauna associated with D. amatheiae. We documented macrofauna within D. amatheiae holdfasts, with the objective of establishing a first analysis of the holdfast fauna for this kelp and identifying, where possible, any host-specific taxa. Holdfasts were collected at six locations, spanning most of the range of D. amatheiae on the southeastern Australian mainland. Macrofauna were removed from holdfasts and identified to the lowest possible taxonomic level. Modelling was applied to determine factors correlated with patterns of assemblages among locations. Holdfast assemblages were found to vary significantly among locations and exhibited a latitudinal gradient in assemblage structure. The northernmost location (Aragunnu), which has the highest risk of D. amatheiae range retractions, was found to have distinct species assemblages and generally higher diversity and abundance than locations further south. However, no host-specific taxa were identified in samples, indicating that there is a low risk of multiple hidden species extinctions occurring in holdfast macrofauna, due to future range retractions of D. amatheiae. Rather, most of the macrofauna taxa in D. amatheiae holdfasts were found to also occur in association with the sympatric golden kelp Ecklonia radiata, which is not expected to undergo range retractions at the latitudes where losses of D. amatheiae are projected. Overall, there is an urgent need to develop strategies to combat projected future range retractions of D. amatheiae to reduce impacts on the species that rely on D. amatheiae for habitat.

Taxonomic & biological annotations on six endangered shark species found in the landings at Karachi Fish Harbour with reference to some conservation strategy measures

Identification based on taxonomy of six (6) shark species that have been occasionally seen in the landings of Karachi Fish Harbour (KFH) was carried out in this study. Between 2014 and 2023, field and laboratory observations were made in five different surveys. These uncommon shark species were identified as Carcharhinus amblyrhynchus, C. amboinensis, C.hemiodon, C. longimanus, C. macloti and Stegostoma fasciatum. The International Union for Conservation of Nature (IUCN) have described these species of sharks as endangered, data deficient, critically endangered and near threatened species respectively in their Red List 2022. These species are being captured and sold for markets connected to domestic and international commerce or export procedures, despite the fact that they are endangered and on the verge of extinction. Regrettably, the main reasons for this out-of-control situation and the extinction of these protected species are the local fishermen's misunderstanding of the laws and the inadequate monitoring provided by higher authorities

An ethylene response factor AcERF116 identified from A. catechu is involved in fruitlet abscission

Procedural abscission of outer reproductive organs during flower and fruit development occurs in most plant lineages. Undesired abscission, such as fruitlet shedding causes considerable yield loss in many fruit-producing species. Ethylene is one of the key factors regulating organ abscission. However, the participants involved in the ethylene-mediated abscission pathway remains largely unidentified. In this study, we focused on the ethylene response transcription factors (ERFs) regulating fruitlet abscission in an industrial tree species, A. catechu. A total of 165 ERF genes have been found in the A. catechu genome and eight of these showed distinct expression between the “about-to-abscise” and “non-abscised” samples. An AcERF116 gene with high expression level in the fruit abscission zone (FAZ) was selected for further study. Overexpression of the AcERF116 gene accelerated cell separation in the abscission zone (AZ) and promoted pedicel abscission in transgenic tomato lines. The PG (ploygalacturonase) activity was enhanced in the FAZs of A. catechu fruitlets during ethylene-induced fruitlet abscission, while the PME (pectin methylesterase) activity was suppressed. In addition, cytosolic alkalization was observed in the AZs during abscission in both tomato and A. catechu. Our results suggest that AcERF116 plays a critical role in the crosstalk of ethylene and fruitlet abscission in A. catechu.

Differential Mitochondrial Genome Expression of Three Sympatric Lizards in Response to Low-Temperature Stress.

Ecological factors related to climate extremes have a significant influence on the adaptability of organisms, especially for ectotherms such as reptiles that are sensitive to temperature change. Climate extremes can seriously affect the survival and internal physiology of lizards, sometimes even resulting in the loss of local populations or even complete extinction. Indeed, studies have shown that the expression levels of the nuclear genes and mitochondrial genomes of reptiles change under low-temperature stress. At present, the temperature adaptability of reptiles has rarely been studied at the mitochondrial genome level. In the present study, the mitochondrial genomes of three species of lizards, Calotes versicolor, Ateuchosaurus chinensis, and Hemidactylus bowringii, which live in regions of sympatry, were sequenced. We used RT-qPCR to explore the level of mitochondrial gene expression under low-temperature stress, as compared to a control temperature. Among the 13 protein-coding genes (PCGs), the steady-state transcript levels of ND4L, ND1, ATP6, and COII were reduced to levels of 0.61 ± 0.06, 0.50 ± 0.08, 0.44 ± 0.16, and 0.41 ± 0.09 in C. versicolor, respectively, compared with controls. The transcript levels of the ND3 and ND6 genes fell to levels of just 0.72 ± 0.05 and 0.67 ± 0.05 in H. bowringii, compared with controls. However, the transcript levels of ND3, ND5, ND6, ATP6, ATP8, Cytb, and COIII genes increased to 1.97 ± 0.15, 2.94 ± 0.43, 1.66 ± 0.07, 1.59 ± 0.17, 1.46 ± 0.04, 1.70 ± 0.16, and 1.83 ± 0.07 in A. chinensis. Therefore, the differences in mitochondrial gene expression may be internally related to the adaptative strategy of the three species under low-temperature stress, indicating that low-temperature environments have a greater impact on A. chinensis, with a small distribution area. In extreme environments, the regulatory trend of mitochondrial gene expression in reptiles is associated with their ability to adapt to extreme climates, which means differential mitochondrial genome expression can be used to explore the response of different lizards in the same region to low temperatures. Our experiment aims to provide one new research method to evaluate the potential extinction of reptile species in warm winter climates.

Increasing duration of heatwaves poses a threat to oyster sustainability in the Gulf of Mexico

The future of the wild oyster fishery in the northern Gulf of Mexico is largely uncertain due to changing environmental conditions and declining abundance of harvestable oysters. Specifically, rising temperatures can directly impact the physiological thresholds of the eastern oyster (Crassostrea virginica) at all life history stages and alter the narrow ecological niche this oyster occupies. The impact of rising temperatures is likely most pronounced during atmospheric heatwaves, defined as three or more days above the 90th percentile of daily maximum air temperatures, which have been shown to be increasing in frequency. Increasing exposure to high temperature extremes may contribute to and exacerbate an already declining oyster fishery. Critical to fishery health is recruitment i.e., the addition of new harvestable biomass, which is a dynamic process strongly driven by temperature. Here, we examine the relationship between heatwave characteristics and the prediction of poor oyster recruitment, measured as the abundance of post-larval oysters (e.g. spat) below the site-specific median density observed in historically productive oyster fisheries over 46-years (1976 – 2020) in Mobile Bay, Alabama and 21-years (1993 – 2014) in Apalachicola Bay, Florida. We acquired daily maximum air temperature measurements measured over 50 years (1970 – 2020) at weather monitoring stations adjacent to the bays to identify site specific annual heatwave events (maximum yearly air temperature, yearly and consecutive heatwave days, and number of annual heatwaves). Then, years with extreme heatwaves that exceeded the 75th percentile for the 50-year measurements were compared to years with non-extreme heatwave events. Years with extreme total heatwave days and extreme consecutive heatwave days were correlated with low post-larval oyster density. Across both bay systems, if consecutive heatwave days exceeded 11 days, then poor recruitment of oysters occurred 83 % of the time. Extreme heatwave duration as an indicator for poor recruitment has the potential to be a powerful tool for fishery managers to forecast recruitment and inform sustainable oyster harvest based on year-to-year variability in heatwave duration and long-term warming trends. Our findings illustrate how extreme temperatures can exacerbate multiple physiological and ecological stressors resulting in the loss of a keystone species for healthy and resilient coastal ecosystems.

Chromosome Transplantation: Opportunities and Limitations.

There are thousands of rare genetic diseases that could be treated with classical gene therapy strategies such as the addition of the defective gene via viral or non-viral delivery or by direct gene editing. However, several genetic defects are too complex for these approaches. These "genomic mutations" include aneuploidies, intra and inter chromosomal rearrangements, large deletions, or inversion and copy number variations. Chromosome transplantation (CT) refers to the precise substitution of an endogenous chromosome with an exogenous one. By the addition of an exogenous chromosome and the concomitant elimination of the endogenous one, every genetic defect, irrespective of its nature, could be resolved. In the current review, we analyze the state of the art of this technique and discuss its possible application to human pathology. CT might not be limited to the treatment of human diseases. By working on sex chromosomes, we showed that female cells can be obtained from male cells, since chromosome-transplanted cells can lose either sex chromosome, giving rise to 46,XY or 46,XX diploid cells, a modification that could be exploited to obtain female gametes from male cells. Moreover, CT could be used in veterinary biology, since entire chromosomes containing an advantageous locus could be transferred to animals of zootechnical interest without altering their specific genetic background and the need for long and complex interbreeding. CT could also be useful to rescue extinct species if only male cells were available. Finally, the generation of "synthetic" cells could be achieved by repeated CT into a recipient cell. CT is an additional tool for genetic modification of mammalian cells.

Museum genomics reveals the hybrid origin of an extinct crater lake endemic.

Crater lake fishes are common evolutionary model systems, with recent studies suggesting a key role for gene flow in promoting rapid adaptation and speciation. However, the study of these young lakes can be complicated by human-mediated extinctions. Museum genomics approaches integrating genetic data from recently extinct species are therefore critical to understanding the complex evolutionary histories of these fragile systems. Here, we examine the evolutionary history of an extinct Southern Hemisphere crater lake endemic, the rainbowfish Melanotaenia eachamensis. We undertook comprehensive sampling of extant rainbowfish populations of the Atherton Tablelands of Australia alongside historical museum material to understand the evolutionary origins of the extinct crater lake population and the dynamics of gene flow across the ecoregion. The extinct crater lake species is genetically distinct from all other nearby populations due to historic introgression between two proximate riverine lineages, similar to other prominent crater lake speciation systems, but this historic gene flow has not been sufficient to induce a species flock. Our results suggest that museum genomics approaches can be successfully combined with extant sampling to unravel complex speciation dynamics involving recently extinct species.

Who was the real sabertooth predator: Thylacosmilus or Thylacoleo?

Sabertoothed mammalian predators, all now extinct, were almost exclusively feloid carnivorans (Eutheria, Placentalia): here a couple of extinct metatherian predators are considered in comparison with the placental sabertooths. Thylacosmilus (the "marsupial sabertooth") and Thylacoleo (the "marsupial lion") were both relatively large (puma-sized) carnivores of the Plio-Pleistocene in the Southern Hemisphere (Argentina and Australia, respectively). Both carnivores have captured the public imagination, especially as predators that were somehow analogous to northern placental forms. But a more detailed consideration of their morphology shows that neither can be simply analogized with its supposed placental counterpart. While Thylacosmilus did indeed have saber-like canines, many aspects of its anatomy show that it could not have killed prey in the manner proposed for the sabertoothed felids such as Smilodon. Rather than being an active predator, it may have been a specialized scavenger, using the hypertrophied canines to open carcasses, and perhaps deployed a large tongue to extract the innards. Thylacoleo lacked canines, and its supposedly "caniniform" incisors could not have acted like a felid's canines. Nevertheless, while its mode of dispatching its prey remains a subject for debate, it was clearly a powerful predator, likely to be capable of bringing down prey bigger than itself while hunting alone. In that regard, it may have filled the ecomorphological role proposed for placental sabertooths, and so despite the lack of canines can be nominated as the true "marsupial sabertooth" out of the two extinct taxa.

Edge history modulates the depth of edge influence: Evidence from ground beetles with different feeding traits

Anthropogenic habitat loss and fragmentation are major concerns to conservationists, since these processes lead to species decline and extinction. Edge effect is one of the most important causes of biodiversity losses in fragmented habitats. The depth of edge influence, the distance over which the edge effect penetrates into the adjacent habitat is a central issue, as it fundamentally determines whether the habitat fragment has any remaining core habitat, which is essential for the survival of habitat specialist species. We reviewed 204 edge studies on ground beetles (Coleoptera: Carabidae) of different feeding habits, in forests, one of the habitats most impacted by humans. Meta-analysing 1814 abundance data of 351 ground beetle species from forest edges and their adjoining interiors, we showed that forest edges had significantly higher abundance of herbivorous, omnivorous, and predatory ground beetles than their interiors. Edge history considerably affected the depth of edge influence which on all trophic groups was similar in natural edges and those maintained by agriculture (≤ 10–20 m), while it was wider (> 300 m) when created by forestry or other anthropogenic activities. Consequently, the minimum area of a forest fragment should be ∼ 330 ha in order to keep half of it as core habitat to preserve forest-interior species.

Hatchery Losses in Flocks of Layer and Broiler Breeders Due to Feed Contamination with Nicarbazin and Narasin: A Case Report.

In the current study, we investigated decreased hatchability and increased embryonic mortality in two farms of layer breeders (flocks A1 and B1) and a farm of broiler breeders (flocks C1 and C2) from Austria, which also presented discoloration of eggshells in 2% of the eggs. After conducting clinical evaluations and the approval that the feed operator was common for flocks A1 and B1, and C1 and C2, it was decided to investigate the feed. Our findings revealed that the feed contained levels of nicarbazin and narasin up to five and 14 times, respectively, above the maximum limits allowed by the European Union for nontarget species. On the other hand, there were no significant abnormalities in vitamin levels, which were also described as the etiology of the noticed abnormalities. Switching to a noncontaminated feed resulted in the clinical signs and production parameters returning to expected ranges. This report emphasizes the significance of considering feed contamination by nicarbazin and narasin as a potential cause of hatchery losses in nontarget species, even in the absence of other clinical signs.

Fine-Grained Analysis of Coral Instance Segmentation using YOLOv8 Models

Within the geographical boundaries of Indonesia, coral reefs flourish as intricate ecosystems bustling with a variety of marine creatures that play a crucial role, in preserving biodiversity. However this delicate harmony faces threats from climate change and human activities, leading to the risk of species loss. Despite growing awareness surrounding these challenges effectively and swiftly monitoring conditions remains a task. Existing methods for assessing corals often fall short due to requiring extensive specialist knowledge, lacking large-scale coverage, and being costly to implement. To tackle these obstacles this research suggests an approach for automated reef monitoring using instance segmentation with a YOLOv8 model. Leveraging YOLOv8 segmentation capabilities enables efficient analysis of corals. A systematic process is employed involving data collection, preparation (including techniques like Histogram Equalization), training the model on a reef dataset, model evaluation and enhancing the segmentation mask. The outcomes reveal the YOLOv8m Pp model with 96.7% precision 95.9% recall rate and a mean Average Precision (mAP50) score of 98.2%. This study demonstrates the potential of YOLOv8 to accurately segment instances for monitoring reefs in Indonesia, hence facilitating improved conservation strategies.