With the promulgation of the national bilingual education policy, the vast majority of ethnic minorities have learned to master both Mandarin Chinese and ethnic minority languages, providing them with more opportunities for their development, but it does not emphasize their foreign language skills to go out into the world. Therefore, the research theme of this paper is the challenges of English language education in ethnic minority areas in the context of bilingual education, taking Yunnan Province as an example. The study finds that there are three main challenges facing English language education for ethnic minorities. They are language teaching issues in ethical minority areas, English teacher issues in ethical minority areas, and people’s attitudes toward English learning in ethical minority areas. Firstly, there are a lot of problems with English teachers, such as the impact of minority languages on Han English teachers is big, insufficient teacher resources, low professional quality, and high turnover. Then, the students learn English with language transfer and are not interested in it. Finally, schools, teachers, parents, and students do not value English education enough.