The maize (Zea mays) endosperm enzyme, ADP-glucose pyrophosphorylase, which produces ADP-glucose from ATP and glucose-l-phosphate, is an important enzyme in the synthesis of starch. ADP-glucose arising from the action of this enzyme is the major, if not sole, donor of glucose for starch biosynthesis. The enzyme is composed of two dissimilar subunits encoded by the two unlinked genes, Shrunken-2 (Sh2) and Brittle-2 (Bt2) (1, 2). The enzyme is allosterically activated by 3-phosphoglyceric acid and inhibited by phosphate (3). Although it remains an open question whether these allosteric properties are physiologically relevant or whether they simply reflect the evolutionary history of the two structural genes (4), there does exist, nevertheless, much interest in determining whether genetic modification of this enzyme could lead to increased rates of starch biosynthesis in the maize endosperm. Because endosperm starch content comprises approximately 70% of the dry weight of the seed, alterations in starch biosynthesis would clearly affect corn yield. As a first step toward such experiments, we have isolated and sequenced genomic clones of Sh2. The structure of the gene (Table I, Fig. 1) is based on sequence analysis of three overlapping clones isolated from a Black Mexican Sweet genomic library. Exonic sequences were defined by comparison with the cDNA sequenced previously (2) and further sequencing of cDNAs subsequently isolated. These sequences correct for the fact that the original cDNA contained some non-Sh2 sequences at its extremities. The exonic genomic and cDNA sequences are nearly 100% identical. The few differences may be due to DNA polymorphisms because these clones were isolated from different corn lines. Placement of the start of the first exon is based on primer extension experiments. In the absence of dideoxynucleotides, four major bands, differing by one nucleotide, were observed. In the presence of dideoxynucleotides, the three large bands were seen in all four sequencing tracks. In each case, the largest band occurred at the same distance from the primer. It is unknown whether this reflects heterogeneity within the normal population of Sh2 transcripts or some laboratory artifact. Nevertheless, the start of transcription can be placed within three base pairs.
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