AIM: To clone and identify of human gene 2 transactivated by hepatitis C virus core protein. METHODS: To screen and clone the target genes transactivated by hepatitis C virus (HCV) core protein, we used suppression subtractive hybridization (SSH) and bioinformatics techniques. The mRNA was isolated from HepG2 cells transfected pcDNA3.1(-)-core and pcDNA3.1(-) empty vector, respectively, and SSH method was employed to analyze the differentially expressed DNA sequence between the two groups. The obtained sequences were searched for homologous DNA sequence from GenBank, one of which was a new gene with unknown function. The new gene with no homology with known genes in this database was confirmed and electric polymerase chain reaction was conducted for the cloning of the full-length DNA for the new gene and in conjunction with Kozak role and the exist of polyadenyl signal sequence. The reverse transcription PCR (RT-PCR) was used to amplify the new gene, named TAHCCP2, from the mRNA of HepG2 cells transfected. The sequence for the TAHCCP2 gene was deposited into GenBank, and the accession number is AY039043. RESULTS: The full-length of TAHCCP2 was of 429 bp, and it was composed of 142 amino acid residues. The cloning of TAHCCP2 was correct and confirmed by sequencing. CONCLUSION: The cloning and identification of human gene 2 transactivated by HCV core protein will pave the way for the study of the molecular mechanism of the transactivating effects of HCV core protein and the development of new therapy for chronic hepatitis C. Wang JJ, Cheng J, Liu Y, Yang Q, Ji D, Dang XY, Wang CH. Cloning and identification of human gene 2 transactivated by hepatitis C virus core protein. Shijie Huaren Xiaohua Zazhi 2003;11(12):1893-1896
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