Abstract We present a new map of bed topography and ice thickness together with a corresponding ice volume estimate representative of the years ~2010 for all Scandinavian ice caps and glaciers. Starting from surface observations, we invert for ice thickness by iteratively running an innovative ice dynamics model on a distributed grid and updating bed topography until modelled and observed glacier dynamics as represented by their rate of surface elevation change (dh/dt) fields align. The ice flow model used is the instructed glacier model (Jouvet and Cordonnier, 2023, Journal of Glaciology 1–15), a generic physics-informed deep-learning emulator that models higher-order ice flow with high-computational efficiency. We calibrate the modelled thicknesses against >11 000 ice thickness observations, resulting in a final ice volume estimate of 302.7 km3 for Norway, 18.4 km3 for Sweden and 321.1 km3 for the whole of Scandinavia with an error estimate of ~ $\pm 11\%$ . The validation statistics computed indicate good agreement between modelled and observed thicknesses (RMSE = 55 m, Pearson's r = 0.87, bias = 0.8 m), outperforming all other ice thickness maps available for the region. The modelled bed shapes thus provide unprecedented detail in the subglacial topography, especially for ice caps where we produce the first maps that show ice-dynamically realistic flow features.