Diverse Regions Research Articles

POLÍTICAS PÚBLICAS EDUCACIONAIS NO AMAZONAS: UM ESTUDO DAS ESPECIFICIDADES REGIONAIS

This article discusses the implementation of Public Educational Policies in the State of Amazonas, addressing its particularities and the challenges faced in one of the richest regions in diversity, but also marked by educational inequalities. Although the Federal Constitution of Brazil, in articles 6 and 205, guarantees the right to education, the Amazonian reality reveals the need for a more in-depth look at the quality of education. The research investigates whether secretariats and technical teams are properly prepared to create and implement policies that transcend mere access to education. The central hypothesis is that the lack of qualified professionals in the State compromises the effectiveness of these policies, which requires an approach that prioritizes the interests of the school community and students, promoting quality education that meets local specificities.

Effect of Integrated Crop–Livestock Systems on Soil Properties and Microbial Diversity in Soybean Production

Integrated crop and livestock systems (ICLSs) have been considered an important management-based decision to improve soil health by carbon sequestration. A two-year study (2019–2021) at CPBES in Newton, MS, was conducted to evaluate the effect of an ICLS on soil microbial diversity in the southeastern region of the USA, representing agroclimatic conditions that are warm and humid. Amplicons targeting bacterial 16S rRNA genes and fungal ITS2 regions were sequenced. Taxonomic assignment and characterization of microbial diversity were performed using QIIME2®. Soil fungal diversity pattern showed significant difference (alpha diversity, p = 0.031 in 2020 and beta diversity, p = 0.037 in 2021). In contrast, no significant differences were observed in bacterial diversity. However, there were several beneficial bacterial phyla, such as Proteobacteria and Actinobacteria, and fungal phyla such as Ascomycota, which were dominant in both years and did not show significant differences due to cover crop treatments. Canonical Correspondence Analysis (CCA) and Mantel test showed significant influence on fungal diversity due to carbon (rm = 0.2581, p = 0.022), nitrogen (rm = 0.2921, p = 0.0165), and electrical conductivity (rm = 0.1836, p = 0.0583) in 2021, and on bacterial diversity due to EE-GRSP (rm = 0.22, p = 0.02) in 2020. However, the results showed that there were no significant differences between the cover crop treatments that were consistent over a two-year study period. However, the mix of different cover crops such as oats (Avena sativa L.), crimson clover (Trifolium incarnatum L.), and tillage radish (Raphanus sativus L.) demonstrated higher positive correlation and lower negative correlation with different bacterial and fungal phyla. Long term study of ICLS is suggested to understand the shift in microbiome that would help in understanding the role of cover crops and grazing in improving crop production sustainably.

Phylogenomic insights and geographic distribution of the New World genus Amphibolips Reinhard (Hymenoptera: Cynipidae, Cynipini) using ultraconserved elements

AbstractIn recent years, new wasp species and genera of Cynipidae have been described, and their species delimitation and evolutionary relationships have been supported using molecular markers. However, few studies have included comprehensive and extensive sampling of specimens across the complete distribution of a single genus. In this study, we analysed the phylogenetic relationships of the genus Amphibolips throughout its range using ultraconserved elements (UCEs). We collected 520 adult wasps from 401 sites in various geographic locations, predominantly in Mexico, and used 78 wasps for UCE analysis. Our results demonstrate that Amphibolips forms a monophyletic clade. Amphibolips can be further subdivided into four genetically well‐differentiated clades. Each clade had morphological traits that could be collectively characterised. Species delimitation using molecular sequencing highlights the taxonomic complexity involved in separating and assigning species using exclusively morphological criteria. This approach offers an opportunity to refine current morphological taxonomic criteria or propose new criteria to establish more accurate classifications. The rich diversity of host species and geographic regions in Mexico represents a biodiversity hotspot for Amphibolips. The number of undescribed species remains high. This study facilitates the determination of appropriate boundaries for putative new Amphibolips species.

Cliffs support lichen communities unique from nearby forests

Cliffs support rare, endemic, and glacial relict vegetation that may differ from vegetation in surrounding forests. Yet, cliffs are difficult to sample, and rock-dwelling lichens can be challenging to identify; therefore, cliff lichens are often excluded from biodiversity studies. This omission creates fundamental gaps in our understanding of cliff lichens that lead to underestimation of overall community diversity. This study addresses one such gap by asking a basic question: do lichen communities on cliffs differ from rock-dwelling lichen communities in forests? To answer this question, we compared lichen communities from three cliffs in the Linville Gorge (North Carolina, USA; 369 m2 of cliff face surveyed) to rock and soil-dwelling lichen communities in forested plots across the same region (Southern Appalachian Mountains, USA, Alabama to North Carolina; 198 1-hectare forested plots). Forest plots were further divided into three groups based on elevation, proximity to Linville Gorge cliffs, and location within the state of North Carolina. A total of 225 rock or soil-dwelling lichen species were found in forest plots throughout the study area, while 104 species were found on cliffs. Two rare cliff-specialist species, Canoparmelia alabamensis, and Chrysothrix susquehannensis, were locally abundant on the studied cliffs but absent from surrounding forests. Our results show that cliffs support 20% of regional rock-dwelling lichen diversity, and that these cliff communities are distinct from those in forests. The high diversity, occurrence of unique species, and presence of rare lichens on cliffs indicate that cliff lichens should be included in biodiversity inventories and stewardship plans. To support this inclusion, we provide the first checklist for the lichens of Linville Gorge. Checklists like this one, including both cliff and non-cliff lichens, provide data on regional diversity and rarity that inform lichen conservation and rock climbing management.

Multidimensional patterns of bird diversity and its driving forces in the Yangtze river basin of China

Biodiversity is fundamental to human well-being and economic development. The Yangtze River, the largest river in China, faces biodiversity loss due to habitat degradation, climate change, and other anthropogenic threats. However, the long-term changes in the region's biodiversity remain poorly understood. Here, we constructed an optimized living planet index (LPIO) by combining Partial Least Squares Structural Equation Modeling and Random Forest Modeling. Using data from a monitoring network of 536 sites, we observed an increasing trend in terrestrial bird diversity and functional complexity across the entire watershed from 2011 to 2020. Our findings indicate that a large-scale ecological restoration program has contributed to increases in terrestrial and aquatic bird diversity in the Yangtze River Basin. In contrast, bird diversity in the downstream area has decreased by 2.83 ​%, largely due to a rapid decline in wetland birds. The degradation of wetland habitats and insufficient conservation measures have negatively impacted bird diversity in the downstream region. This suggests that although there have been significant improvements in terrestrial bird diversity, more effective wetland restoration is necessary for biodiversity conservation. We recommend optimizing the national large-scale biodiversity monitoring network and increasing the number of upstream monitoring sites.

Dis-Catchment Areas: The Need for Asymmetric Decentralization in Island Characteristic Areas

This paper aims to answer the call for studies on Indonesia has implemented symmetrical decentralization amidst regional diversity. However, in several areas characterized by islands (dis-catchment), local governments experience difficulties in utilizing their geographic resources efficiently to provide services and encourage development. This research addresses the issue by adapting decentralization policies to the needs of specific regions. It employs a qualitative approach, involving site visits to collect data through interviews, observation, and documentation. The research uses the Spiral model with the help of N-Vivo 12 plus for data analysis. The research results show that services and development in this archipelagic region are not in harmony with its geographical conditions. Services and development tend to be concentrated in government capitals, so these services are expensive and resource-intensive to access in remote areas. Therefore, efforts are needed to reorganize this asymmetrical archipelagic area to better adapt to its unique geographical conditions, especially in an archipelagic country like Indonesia.

Diversity of Chilean-Patagonian and Brazilian Floristic Regions in Batumi Botanical Garden

Diversity of Chilean-Patagonian and Brazilian Floristic Regions in Batumi Botanical Garden

Genetic consequences of the dramatic decline in the north-west pre-caspian saiga (Saiga tatarica tatarica) population: a comparison of modern and museum samples on mtDNA and microsatellite loci

The North-West Pre-Caspian saiga (Saiga tatarica tatarica) population numbers was about 800 thousand individuals in the middle of the last century. There was a dramatic decline at the end of the 20th century, and by 2015 this saiga population numbers and was about five thousand animals. Our paper presents the results of microsatellite loci and of the mtDNA control region analysis obtained for the museum saiga samples from the North-West Pre-Caspian population, collected at the peak of their numbers in the 1950s. We compared these data with our previous results for the samples collected during the population depression in1999–2016. There were no noticeable differences of mtDNA control region diversity between the museum and modern saiga samples. The most vivid genetic consequence of the severe decline in population numbers was a significant increase of the inbreeding coefficient (Fis) calculated from the microsatellite loci.

Regional diversity of the ALS gene and hormesis due to tribenuron-methyl in Centaurea cyanus L.

Centaurea cyanus L. is a common field weed in Eastern Europe but only in Poland biotypes of this species with resistance to acetolactate synthase (ALS) inhibitors have been confirmed. This phenomenon is constantly developing and spreading to consecutive regions of Poland. This study aimed to assess the response of selected Polish C. cyanus populations to tribenuron-methyl and to analyse the genetic variability of the ALS gene of C. cyanus populations resistant to ALS inhibitors. Between 2017 and 2021, 13 seed samples were collected from eastern Poland and a dose-response study with tribenuron-methyl was performed. Eleven populations resistant to tribenuron-methyl were identified. All populations from this study as well as 6 additional resistant populations characterised in the previous dose-response studies were subjected to molecular analysis of the ALS gene. Target-site resistance due to mutations P197S, P197Q, P197T and P197A were identified in 8 populations from Warmia-Masuria and Podlaskie provinces. This is the first case of target-site resistance (TSR) in C. cyanus confirmed by sequencing of the ALS gene. Moreover in some resistant plants, ten changes in the amino acid ALS sequence were identified in comparison to those in the susceptible ones. In none of the populations were all mutations detected in the same individual. The highest frequency of mutations was detected in Warmia-Masuria province. Some C. cyanus populations resistant to ALS inhibitors showed hormesis effect concerning shoot fresh weight after tribenuron-methyl treatment. Stimulation due to half the recommended dose of tribenuron-methyl was the highest and the difference between untreated and treated plants was statistically significant in two populations from Warmia-Masuria and in one from Podlaskie province.

Diversity of transactivation regions of DMRT1 in vertebrates

BackgroundDoublesex and mab-3 related transcription factor (DMRT) 1, commonly found in all vertebrates, regulates the transcription of genes involved in the masculinization and maintenance of gonadal somatic cells and/or germline cell development. DMRT1 has a DNA-binding domain called the DM domain and a transcription regulatory region. Unlike the former, there is little knowledge about the latter transcription regulatory region. This study aimed to identify the transcription activation regions of DMRT1 from four species: humans and mice (mammals), leopard geckos (reptiles), and medaka (teleost fish), adding perspectives on evolutionary conservation and diversity.Methods and resultsFor each species, several expression plasmids of deletion mutants were constructed, and the resultant plasmid and a DMRT1-driven luciferase reporter were co-transfected into cultured cells to measure transactivation ability. The key point of this analysis is that the transactivation ability was normalized by quantifying the expression levels of DMRT1 variants using the HiBiT tag. As a result, two to three transactivation regions were suggested to exist in the C-terminal region of the DM domain in all four species. Among seven regions in DMRT1, the fourth region from the N-terminus contributed to transactivation common to the four species, and the sixth and seventh regions on the C-terminal side differed depending on the species.ConclusionsThese findings indicated that the regions involved in the transactivation ability of DMRT1 could subtly change during evolution, indicating diversity in transactivation domains.

Shared anthropology of the Middle East: Essays on media in honor of Faye Ginsburg

AbstractThe articles in this special issue are the outcome of the panel: “Papers in Honor of Faye Ginsburg: Visual and Media Anthropology in the Middle East,” which was held virtually for the American Anthropological Association Annual Meetings of November 2021. The reach of Ginsburg's work as well as her mentorship through the creation of NYU's Graduate Program in Culture & Media has shaped the ethnography of media and visual anthropology across a diversity of geographic regions. In this particular issue, we bring together scholars of SWANA (Southwest Asia and North Africa, a term that more broadly encompasses what is often referred to as the Middle East) whose projects are deeply influenced by Ginsburg's scholarship on shared anthropology, collaborative media practices and cultural activism. This introduction includes excerpts from a conversation with Ginsburg.

Viral Diversity in Mixed Tree Fruit Production Systems Determined through Bee-Mediated Pollen Collection

Commercially cultivated Prunus species are commonly grown in adjacent or mixed orchards and can be infected with unique or commonly shared viruses. Apple (Malus domestica), another member of the Rosacea and distantly related to Prunus, can share the same growing regions and common pathogens. Pollen can be a major route for virus transmission, and analysis of the pollen virome in tree fruit orchards can provide insights into these virus pathogen complexes from mixed production sites. Commercial honey bee (Apis mellifera) pollination is essential for improved fruit sets and yields in tree fruit production systems. To better understand the pollen-associated virome in tree fruits, metagenomics-based detection of plant viruses was employed on bee and pollen samples collected at four time points during the peak bloom period of apricot, cherry, peach, and apple trees at one orchard site. Twenty-one unique viruses were detected in samples collected during tree fruit blooms, including prune dwarf virus (PDV) and prunus necrotic ringspot virus (PNRSV) (Genus Ilarvirus, family Bromoviridae), Secoviridae family members tomato necrotic ringspot virus (genus Nepovirus), tobacco necrotic ringspot virus (genus Nepovirus), prunus virus F (genus Fabavirus), and Betaflexiviridae family member cherry virus A (CVA; genus Capillovirus). Viruses were also identified in composite leaf and flower samples to compare the pollen virome with the virome associated with vegetative tissues. At all four time points, a greater diversity of viruses was detected in the bee and pollen samples. Finally, the nucleotide sequence diversity of the coat protein regions of CVA, PDV, and PNRSV was profiled from this site, demonstrating a wide range of sequence diversity in pollen samples from this site. These results demonstrate the benefits of area-wide monitoring through bee pollination activities and provide new insights into the diversity of viruses in tree fruit pollination ecosystems.

From Local Farms to Supermarket Foods: The Story of the Homogenization of the Argentine Diet Told by the IsotopeRatios of Modern Teeth.

Nutritional changes over the last century, driven by globalization, hypermarketization, and malnutrition, are global in scale. Large countries in the Global South might be resilient to dietary homogenization due to their natural diversity of regions and ecosystems, which might have prevented the adoption of supermarket diets. Argentina has a wide array of ecosystems and historically different subsistence diets dependent on regional characteristics. We analyzed the spatiotemporal variation of stable isotope values in Argentina using modern teeth to test for regional dietary patterns and its consistence over time. We collected teeth from voluntary donors born between 1940 and 2010, from 72 locations across Argentina. A total of 119 teeth were analyzed for the markers δ13Cdentine, δ13Cenamel, δ15N, and δ34S. A reconstruction of isotopic niches was performed to estimate dietary patterns across different regions and time periods. This study is the first to analyze changes in modern dietary patterns in Argentina using isotopic data measured in contemporary teeth. We showed latitudinal, longitudinal, and temporal differences in isotopic values, reflecting the variation in available resources within the country. Changes in the diet were observed over time, including declining δ15N values, a reduction in δ34S range, and a trend toward homogenization of δ13Cenamel values. Conversely, δ13Cdentine values remained constant over time, maintaining latitudinal patterns and regional differences across regions. This study increases our understanding of modern population dietary patterns both spatially and over the last 70 years. Our findings suggest that the Argentine population has shifted toward a supermarket diet in recent years.

Integrative taxonomy of Tethya: description of four new species based on morphology, phylogeny and microbiome diversity

The genus Tethya, one of the most iconic groups in the phylum Porifera. includes nearly 100 valid species. Tethya shows a nearly cosmopolitan distribution, and thus this clade could help elucidate global mechanisms of speciation in sponges. Contrasting with many other marine organisms, Tethya peaks in diversity in the temperate region, with only ∼30% of diversity occurring in the tropics. This pattern may however be related to a lack of studies in the tropics, masked by dubious taxonomic identifications. To address this question, we studied new collections from the Western Atlantic (Caribbean and Brazil) and the Northeastern Atlantic, as well as museum material from the Indian Ocean. Combining morphological investigation with molecular phylogenetics and the study of the sponge’s microbial communities, we conclude that four constitute new species that we describe here: Tethya martini Riesgo, Giribet, & Santodomingo, sp. nov.; Tethya simoni Santodomingo, Zea, & Riesgo, sp. nov.; Tethya erici Díez-Vives, Santodomingo, Moles, & Riesgo, sp. nov.; Tethya orioni Kenny, Santodomingo & Riesgo, sp. nov. Some species thought to be widespread (e.g., T. aurantium and T. seychellensis), each represent multiple species with unique geographic distributions. A phylogenetic analysis of Tethya (based on COI and 28S rRNA sequence data) recovered five main clades, which were also characterized by distinct prokaryotic communities. This suggests that microbiomes could be used as a guide for taxonomic identification in Tethya. We finally explored the existence of a phylosymbiotic pattern in sponges at different levels of prokaryotic taxonomic resolution (i.e., at phylum, class, and genus-level analysis of prokaryotes). Remarkably, our analysis revealed high levels of coevolution of Tethya and their associated microbial communities, even when microbiomes were analysed at the genus level. Our findings support the use of an integrative approach to better understand the evolutionary history of sponges. http://zoobank.org/urn:lsid:zoobank.org:pub:54F80E5E-99A4-43CE-BA3A-BCD01E715595

Developmental trends of military sociology IN Russia (based on the analysis of publications in Sociological Studies, 2014–2023)

The article presents an analysis of the state and prospects of military sociology in Russia, reflected in Sociological Studies for the period 2014–2023. The article is a logical continuation of the previously begun work on the analysis of military sociology institutionalization in Russia for the period 1974–2013. Thus, the results of the 50-year activity of the journal’s editorial board on the support and development of military sociology in Russia are summarized. Based on the thematic content analysis of publications and an analysis of quantitative and qualitative authorship characteristics, conclusions are drawn about a decrease in the number of studies of army problems in the last ten years, an increase in the number of materials on historical issues and prospects for the formation of the sociology of war as a new field of interdisciplinary knowledge. The authorship is being transformed to wards expanding regional and international diversity, reducing the number of authors representing the military department. Such problematic issues of military sociology development as the closed nature of research results in the military and the narrowing of traditional military sociological issues are stated. The potential of military sociology in the study of wars and armed conflicts remains unrealized, finding expression in the coverage of peripheral topics.

The Effects of Spatial Structure and Development Intensity of the Urban Landscape on Bird Biodiversity in Anhui Province

Exploring the factors that drive changes in biodiversity is a hot and critically important topic in landscape ecology and biogeography. In this study, semi-structured citizen science data and bird distribution maps were employed to gather data from 2015 to 2020 for the calculation of bird species richness, the Shannon index, and the Pielou index in Anhui Province. These metrics were utilized to assess avian biodiversity and to elucidate the spatial patterns of biodiversity distribution across the region. In this research, a structural equation model (SEM) was utilized to investigate the relationships between the three dimensions of landscape spatial structure, urban development intensity, and environmental factors on bird biodiversity, and a conceptual framework was established to identify the key driving factors. The validity, reliability, and fit of the hypothesized model were substantiated through rigorous testing, demonstrating its reasonableness. The results indicate the following: (1) In landscape spatial structure, landscape composition and configuration play crucial roles in influencing bird diversity. An increased proportion of cultivated land negatively impacts bird diversity, whereas the expansion of forested areas promotes it. At the configuration level, the Largest Patch Index (LPI) significantly enhances bird diversity, serving as the primary driving force. Landscape spatial structure affects bird diversity both directly, through its composition, and indirectly, through its configuration. (2) The dimension of urban development intensity generally shows significant negative impacts; among these, GDP has the greatest comprehensive impact and shows a significant negative impact. (3) Topography has the greatest overall impact on bird diversity among the environmental factors, with a predominantly direct positive effect. (4) Overall, urban landscape spatial structure and urban development intensity are the main driving forces of bird diversity in Anhui Province, the greatest of which is the direct effect of the urban development intensity. These results provide an important scientific basis for landscape planning and ecological protection and provide inspiration for assessing the driving factors of animal and plant diversity in other regions.

Lichens of Tehri Garhwal: Exploring Diversity, Distribution, and Ethnobotanical Significance in the Western-Himalayan Region

Lichens of Tehri Garhwal: Exploring Diversity, Distribution, and Ethnobotanical Significance in the Western-Himalayan Region

Complete sequencing of ape genomes.

We present haplotype-resolved reference genomes and comparative analyses of six ape species, namely: chimpanzee, bonobo, gorilla, Bornean orangutan, Sumatran orangutan, and siamang. We achieve chromosome-level contiguity with unparalleled sequence accuracy (<1 error in 500,000 base pairs), completely sequencing 215 gapless chromosomes telomere-to-telomere. We resolve challenging regions, such as the major histocompatibility complex and immunoglobulin loci, providing more in-depth evolutionary insights. Comparative analyses, including human, allow us to investigate the evolution and diversity of regions previously uncharacterized or incompletely studied without bias from mapping to the human reference. This includes newly minted gene families within lineage-specific segmental duplications, centromeric DNA, acrocentric chromosomes, and subterminal heterochromatin. This resource should serve as a definitive baseline for all future evolutionary studies of humans and our closest living ape relatives.

Hydrology and trophic flexibility structure alpine stream food webs in the Teton Range, Wyoming, USA

AbstractUnderstanding biotic interactions and how they vary across habitats is important for assessing the vulnerability of communities to climate change. Receding glaciers in high mountain areas can lead to the hydrologic homogenization of streams and reduce habitat heterogeneity, which are predicted to drive declines in regional diversity and imperil endemic species. However, little is known about food web structure in alpine stream habitats, particularly among streams fed by different hydrologic sources (e.g., glaciers or snowfields). We used gut content and stable isotope analyses to characterize food web structure of alpine macroinvertebrate communities in streams fed by glaciers, subterranean ice, and seasonal snowpack in the Teton Range, Wyoming, USA. Specifically, we sought to (1) assess community resource use among streams fed by different hydrologic sources, (2) explore how variability in resource use relates to feeding strategies, and (3) identify which environmental variables influenced resource use within communities. Average taxa diet differed among all hydrologic sources, and food webs in subterranean ice‐fed streams were largely supported by the gold alga Hydrurus. This finding bolsters a hypothesis that streams fed by subterranean ice may provide key habitat for cold‐water species under climate change by maintaining a longer growing season for this high‐quality food resource. While a range of environmental variables associated with hydrologic source (e.g., stream temperature) were related to diet composition, hydrologic source categories explained the most variation in diet composition models. Less variable diets within versus among streams suggest high trophic flexibility, which was further supported by high levels of omnivory. This inherent trophic flexibility may bolster alpine stream communities against future changes in resource availability as the mountain cryosphere fades. Ultimately, our results expand understanding of the habitat requirements for imperiled alpine taxa while empowering predictions of their vulnerability under climate change.

Effects of volcanic environment on Setaria viridis rhizospheric soil microbial keystone taxa and ecosystem multifunctionality

Keystone taxa are significant within ecosystem multifunctionality, as certain species fulfil essential functions such as recycling soil nutrients, promoting plant growth, influencing biogeochemical processes, and contributing to human health maintenance. However, there are still gaps regarding the relationship between microbial communities in volcanic rhizospheric soil and ecosystem multifunctionality. As a result, in this research, we employed Illumina MiSeq high-throughput sequencing to analyse the microbial community composition of rhizospheric soil from volcanic S. viridis. Compared with non-volcanic areas, volcanic soils have higher fungal alpha diversity and the absolute abundance of bacteria (16S gene copies) showed significant variation between the two successions (P < 0.0001). The network analysis further demonstrated that the microbial diversity in non-volcanic regions surpassed that of the volcanic area. The volcanic fungi network has more nodes and edges, is more complex than non-volcanic areas (Nodes: 425 vs. 770; Edges: 21844 vs. 74532), and more rhizosphere growth-promoting bacteria are enriched. Regression analysis and correlation networks showed that fungal communities were more closely associated with ecosystem multifunctionality than bacteria. This study lays the groundwork for examining the microbial keystone taxa in the rhizosphere of volcanic plants and offers valuable insights into the multifaceted functions of plant rhizospheric soil ecosystems.