Prussian blue framework materials are expected to be the next generation of electrode materials for commercial batteries because their three-dimensional framework structures facilitate the rapid transport and storage of ions and a variety of redox processes. This work compared the calculations of the model before and after the dispersion correction, and the model considering the effect of van der Waals force was more stable. In addition, the distances between H, C and N atoms were within the range of van der Waals force. Thus it was confirmed that NH4+ was adsorbed on the Ax site in the Prussian blue framework material (AxMa[Mb(CN)6]) by van der Waals interaction, and the charge transfer was mainly achieved by the interaction between the H atom in NH4+ and the N atom in the Prussian blue framework. On this basis, the properties of NH4+ batteries were theoretically screened for the Fe-based Prussian blue analogues (PBAs) with different Ma elements (Ma = Co, Cu, Fe, Mg, Mn, Ni, V or Zn). Considering the regulating effect of different metal elements on the electronic structures of PBAs, MgFe and ZnFe PBAs as the electrode materials of NH4+ batteries are expected to show excellent electrochemical energy storage performance in organic electrolytes.