Dipolar Connectivities Research Articles

The homonuclear Overhauser effect in H2O solution of low-spin hemeproteins. Assignment of protons in the heme cavity of sperm whale myoglobin.

Proton-proton Overhauser effects were observed in 1H2O solutions of sperm whale metcyano myoglobin. Dipolar connectivities involving hyperfine-shifted exchangeable protons such as the proximal and distal histidine ring NH's allowed us to categorize signals as arising from residues located on one side of the heme plane or on the other. With these connectivities, as well as spin-lattice relaxation times, spectral assignments were reached that were used to derive structural and dynamic information about the heme environment. Thus, it was shown that the distal histidine residue does not titrate down to pH approximately 4.1 and that the beta CH2 of the proximal histidine side chain tumbles with the same correlation time as the protein. Some other applications and limitations are presented.

NMR analysis of the structure and metal sequestering properties of metallothioneins.

113Cd-NMR studies have been used to elucidate the structure of the metal-binding sites in mammalian and invertebrate ( Scylla serrata) metallothioneins (MTs). Chemical shift data have shown that all Cd ions are tetrahedrally coordinated to four cysteine thiolate ligands with single cysteinyl sulfurs bridging adjacent metals. Homonuclear decoupling experiments have shown that the 7 g-atoms of metal bound per mole of mammalian protein are located in a three- and a four-metal cluster while the 6 g-atoms of metal in the invertebrate MT are located in two three-metal clusters. The different metal binding affinities of the two mammalian clusters have been determined by 113Cd-NMR. The three-metal cluster prefers Cu greater than Zn greater than Cd whereas exactly the reverse order applies in the four-metal cluster. Proteolytic cleavage of the protein produced a 32-residue fragment which contained the four-metal cluster and demonstrated the presence of two separate domains in the protein. 500 MHz 1H-NMR has been employed to elucidate the arrangement of these metal clusters in the tertiary structure of the protein. The 1H resonances were assigned from their scalar and dipolar connectivities obtained from extensive one and two-dimensional NMR experiments. A specific application of 2D correlation spectroscopy ( COSY ) to the assignment of the 1H resonances in crab MT-1 is discussed. A molecular model, representing the three-dimensional solution structure of this protein, has been constructed based on an analysis of all these data. Detailed structural features of this model are discussed, with particular emphasis on their relationship to the function and evolution of the protein.