The Guadalupian Permian Reef Complex of the Delaware Basin is one of the most studied carbonate reef systems of the Paleozoic. Despite extensive work on the carbonate sedimentology, sequence stratigraphy, and diagenetic history of the Delaware Basin, a high-resolution carbonate carbon isotope record along a platform to basin transect for the Capitanian (264.3–259.5 Ma, the youngest age of the Guadalupian Epoch) does not yet exist. The carbon isotopic record of the Delaware Basin is important because 1) it allows us to test hypotheses about controls on the carbon isotope proxy, 2) it provides constraints on how well modern carbonate platforms like the Great Bahama Banks serve as analogues for ancient carbonate settings, and 3) these types of restricted basins likely played an important role in Permian carbon cycling and the Capitanian extinctions.In this study we present 493 new Capitanian carbonate carbon isotopic values paired with a detailed sedimentological and sequence stratigraphic framework from the platform, slope, toe of slope, and deep basin of the Delaware Basin. The bulk of the new δ13C values fall within the range of previously reported unaltered carbonates from the basin, suggesting that these results record primary environmental processes and were not significantly altered by diagenetic overprinting. With this dataset, we test hypotheses about sources of carbon isotopic variability in shallow carbonate platforms. Our results indicate that in the Delaware Basin there are no systematic and resolvable depth or lateral gradients in carbon isotopic values, that δ13C values do not vary as a function of grain type, and that there is no resolvable relationship between carbon isotopic composition and sea level change. However, we do document statistically significant differences in δ13C distributions among facies associations which we attribute to the isotopic evolution of an upwelling water mass due to direct precipitation of mud along the slope. Our results support the idea that increasing carbon isotopic values through the Capitanian were driven by increased organic carbon burial in restricted basins.