Dialdehyde cellulose nanocrystals (DCNC) are defined as C2 and C3 aldehyde nanocellulose, which can be used as raw materials for nanocellulose derivatization, owing to the high activity of aldehyde groups. Herein, a comparative study in NaIO4 pre-oxidation and synchronous oxidation is investigated for DCNC extraction via choline chloride (ChCl)/urea-based deep eutectic solvent (DES). Ring-liked DCNC with an average particle size of 118 ± 11 nm, a yield of 49.25 %, an aldehyde group content of 6.29 mmol/g, a crystallinity of 69 %, and rod-liked DCNC with an average particle size of 109 ± 9 nm, a yield of 39.40 %, an aldehyde group content of 3.14 mmol/g, a crystallinity of 75 % can be extracted via optimized DES treatment combined with pre-oxidation and synchronous oxidation, respectively. In addition, the average particle size, size distribution, and aldehyde group content of DCNC were involved. TEM, FTIR, XRD, and TGA results reveal the variation of microstructure, chemical structure, crystalline structure, and thermostability of two kinds of DCNC during extraction even though the obtained DCNC exhibiting different micromorphology, pre-oxidation, or synchronous oxidation during ChCl/urea-based DES treatment can be considered as an efficient approach for DCNC extraction.