Plant Death Research Articles

Pertumbuhan Udang Galah (Macrobrachium Rosenbergii) yang Diberi Perlakuan Vegetable Floating Raft (VFR)

Galah shrimp is one type of freshwater shrimp that has great potential for cultivation. One of the obstacles to the growth of king prawns is water quality. This study was conducted to determine the effect of the installation of Vegetable Floating Raft (VFR) on the growth of king prawns (Macrobrachium rosenbergii). This study was conducted using the t-test method, with control and Vegetable Floating Raft treatments. The results showed that the growth pattern of weight and length of king prawns in each treatment was relatively the same. However, the daily weight growth rate of king prawns in the control treatment was greater at 3.36%, compared to the treatment of Vegetable floating raft at 1.26%, while the daily length growth rate of king prawns in the control treatment was 0.86%. The daily length growth rate in the Vegetable floating raft treatment was smaller at 0.61%. During the study the value of the degree of survival of the control treatment was 95%, while in the treatment of Vegetable floating raft the percentage of the degree of survival of king prawns was 62%. Based on the results of visual observations seen the rest of the feed and the rest of the skin during molting. It is suspected that shrimp are stressed due to changes in water quality characterized by increased ammonia levels in the last maintenance week caused by the death of kale plants in the maintenance medium.

Genetic variation in susceptibility of Phytophthora cinnamomi-infected holm oak in the absence or presence of severe drought

Abstract The evergreen oaks Quercus ilex and Quercus suber are exposed to widespread Phytophthora infestation in natural forests. To restore diseased forests, deploying trees less susceptible to combined stress is the most promising approach. We aimed to determine whether drought affects the susceptibility of Q. ilex and Q. suber seedlings to Phytophthora cinnamomi (Pc) differently. Additionally, to provide scientific support for a genetic improvement program to reduce the susceptibility of holm oak to decline, genetic variation and heritability in susceptibility to Pc in Q. ilex in the absence or presence of drought were estimated. About 7000 seedlings of 66 Q. ilex and 9 Q. suber trees from the Extremadura region (Spain) were inoculated with Pc at age 1. The following year, half the experimental blocks were regularly watered and half were exposed to severe drought, and inoculated again with Pc. In the absence of drought, Q. ilex was more susceptible than Q. suber to Pc (mortality 97% and 59%, respectively), but in the presence of drought after Pc infection the species were equally susceptible (~97% plant mortality). It could therefore be expected that under the climate change scenarios predicted for the south of the Iberian Peninsula, offspring of Q. suber will be as compromised as offspring of Q. ilex to soil infestation by Pc. Significant additive genetic variation and heritability in the susceptibility of Q. ilex to combined Pc infection and drought were observed (hi2 = 0.46 for time to death of plants), indicating that breeding for tolerance to combined stress is possible. Family variance component estimates of time to death in Q. ilex were highest in the presence of drought, and genetic control of susceptibility in Q. ilex decreased over time as plant stress increased. This is the first study to define a production population against combined stress in oak.

Sphingolipid homeostasis--how do cells know when enough is enough? Implications for plant pathogen responses.

Sphingolipid homeostatic regulation is important for balancing plant life and death. Plant cells finely tune sphingolipid biosynthesis to ensure sufficient levels to support growth through their basal functions as major components of endomembranes and the plasma membrane. Conversely, accumulation of sphingolipid biosynthetic intermediates, long-chain bases (LCBs) and ceramides, is associated with programmed cell death (PCD). Limiting these apoptotic intermediates is important for cell viability; while overriding homeostatic regulation permits cells to generate elevated LCBs and ceramides to respond to pathogens to elicit the hypersensitive response in plant immunity. Key to sphingolipid homeostasis is serine palmitoyltransferase (SPT), an ER-associated, multi-subunit enzyme catalyzing the first step in the biosynthesis of LCBs, the defining feature of sphingolipids. Across eukaryotes, SPT interaction with its negative regulator ORM is critical for sphingolipid biosynthesis. The recent cryo-electron microscopy structure of the Arabidopsis SPT complex indicates that ceramides bind ORMs to competitively inhibit SPT activity. This system provides a sensor for intracellular ceramide concentrations for sphingolipid homeostatic regulation. Combining the newly elucidated Arabidopsis SPT structure and mutant characterization, we present a model for the role of the two functionally divergent Arabidopsis ceramide synthase classes to produce ceramides that form repressive (trihydroxy LCB-ceramides) or non-repressive (dihydroxy LCB-ceramides) ORM interactions to influence SPT activity. We describe how sphingolipid biosynthesis is regulated by the interplay of ceramide synthases with ORM-SPT when "enough is enough" and override homeostatic suppression when "enough is not enough" to respond to environmental stimuli such as microbial pathogen attack.

Discovery of 4-Hydroxyphenylpyruvate dioxygenase inhibitors with novel pharmacophores

4-Hydroxyphenylpyruvate dioxygenase (HPPD) is pivotal in tyrosine metabolism and essential for plant survival. Its inhibition leads to leaf bleaching and plant death. While current HPPD inhibitors are effective, they pose phytotoxicity risks and may contribute to herbicide resistance. Here, we investigated the inhibitory potential of sethoxydim and atovaquone, which traditionally target acetyl-CoA carboxylase and the cytochrome bc1 complex, respectively. Both atovaquone and the degradation product of sethoxydim exhibited moderate HPPD inhibitory activity. But the mechanism by which sethoxydim inhibited HPPD remained unclear. Therefore, we embarked on an investigation into the crystal structure of the complex, with the aim of elucidating its precise binding mode. Our findings revealed that sethoxydim degrades in solution, producing dealkoxy sethoxydim as the active component in HPPD inhibition. Structural analysis elucidated the binding modes of atovaquone and dealkoxy sethoxydim with HPPD. These binding motifs represent novel pharmacophores and offer promising leads for developing HPPD inhibitors with improved pesticidal profiles.

GhJUB1_3-At positively regulate drought and salt stress tolerance under control of GhHB7, GhRAP2-3 and GhRAV1 in Cotton.

Climate change severely affects crop production. Cotton is one of the primary fiber crops in the world and its production is susceptible to various environmental stresses, especially drought and salinity. Development of stress tolerant genotypes is the only way to escape from these environmental constraints. We identified sixteen homologs of the Arabidopsis JUB1 gene in cotton. Expression of GhJUB1_3-At was significantly induced in the temporal expression analysis of GhJUB1 genes in the roots of drought tolerant (H177) and susceptible (S9612) cotton genotypes under drought. The silencing of the GhJUB1_3-At gene alone and together with its paralogue GhJUB1_3-Dt reduced the drought tolerance in cotton plants. The transgenic lines exhibited tolerance to the drought and salt stress as compared to the wildtype (WT). The chlorophyll and relative water contents of wildtype decreased under drought as compared to the transgenic lines. The transgenic lines showed decreased H2O2 and increased proline levels under drought and salt stress, as compared to the WT, indicating that the transgenic lines have drought and salt stress tolerance. The expression analysis of the transgenic lines and WT revealed that GAI was upregulated in the transgenic lines in normal conditions as compared to the WT. Under drought and salt treatment, RAB18 and RD29A were strongly upregulated in the transgenic lines as compared to the WT. Conclusively, GhJUB1_3-At is not an auto activator and it is regulated by the crosstalk of GhHB7, GhRAP2-3 and GhRAV1. GhRAV1, a negative regulator of abiotic stress tolerance and positive regulator of leaf senescence, suppresses the expression of GhJUB1_3-At under severe circumstances leading to plant death.

Psyllium husk mucilage as a novel seed encapsulant for agriculture and reforestation

AbstractIntroductionAn efficient, economical, and flexible reforestation system capable of uncrewed aerial vehicle (UAV) deployment is a global necessity. Hydrogels have been previously investigated for their use in agriculture, however, research is limited in terms of UAV deployment. Psyllium Husk Mucilage (PHM) a natural hydrogel seed mucilage, has been previously investigated in other agricultural settings and shows promise in fulfilling the needs of UAV seeding.Materials and MethodsA greenhouse trial was conducted under controlled laboratory conditions using two soil conditions 50% and 90% field capacity. PHM and bentonite clay blends containing dextran (DEX) and sodium alginate (SA) were tested for efficacy for two agricultural crops Green beans (Phaseolus vulgaris) and Lebanese cucumber (Cucumis sativus), as well as three Australian native species Acacia stenophylla, Cymbopogon refractus, and Eucalyptus coolabah. Agricultural Trials were conducted across a 4‐week period, whilst A. stenophylla was 8 weeks, and C. refractus and E. coolabah was 12 weeks.ResultsUtilisation of PHM had varying effectiveness based on seed and soil moisture. In nonagricultural seed trials, PHM hydrogel succeeded with A. stenophylla but dried out and rotted in the extended trials with C. refractus and E. Coolabah, leading to plant death. The encapsulated agricultural seeds were largely outperformed in growth trials by C‐Planted at 50% FC, and C‐Surface at 90% FC.ConclusionPHM exhibits potential for successful UAV seeding in low‐moisture agricultural conditions and is promising for fast‐germinating plants or other riverbank species with high water content requirements. Without extending degradation time PHM is not suitable for slow‐growing species.

Monitoring Heavy Metals and Metalloids in Soils and Vegetation by Remote Sensing: A Review

Heavy metal contamination in soils and vegetation poses a significant problem due to its toxicity and persistence. Toxic effects on vegetation include not only impaired growth, reduced yields, and even plant death but also biodiversity loss and ecosystem degradation. Addressing this issue requires comprehensive monitoring and remediation efforts to mitigate the environmental, human health, and ecological impacts. This review examines the state-of-the-art methodologies and advancements in remote sensing applications for detecting and monitoring heavy metal contamination in soil and its subsequent effects on vegetation. By synthesizing the current research findings and technological developments, this review offers insights into the efficacy and potential of remote sensing for monitoring heavy metal contamination in terrestrial ecosystems. However, current studies focus on regression and AI methods to link spectral reflectances and indices to heavy metal concentrations, which poses limited transferability to other areas, times, spectral discretizations, and heavy metal elements. We conclude that one important way forward is the more thorough understanding and simulation of the related physico-chemical processes in soils and plants and their effects on the spectral signatures. This would offer a profound basis for remote sensing applications for individual circumstances and would allow disentangling heavy metal effects from other stressors such as droughts or soil salinity.

Evaluation of Enzymatic and Non-enzymatic Antioxidant Defense Responses of Durum Wheat (Triticum durum Desf.) in Coping with Boron Stress

Wheat, one of the world's most important agricultural products, plays a vital role in meeting the nutritional needs of our growing global population. However, arid and semi-arid regions face a potential threat from boron (B) toxicity. While boron is an essential nutrient for plant growth and development, its excessive presence can be toxic. It disrupts physiological processes, causing chlorosis and necrosis, ultimately leading to yield loss or plant death. Although B deficiency is a problem in the soils of many countries, Türkiye is one of the few experiencing B toxicity problems in its agricultural areas. This study investigated the physiological and biochemical responses of durum wheat to various B concentrations (0-20 mg L-1) under controlled air-conditioned cabin conditions. Durum wheat exhibited a decrease in chlorophyll content, phenolic content, and antiradical capacity at B doses exceeding 10 mg L-1. However, carotene content increased steadily with increasing B concentrations. The activities of antioxidant enzymes, including superoxide dismutase (SOD), ascorbate peroxidase (APX), and glutathione S-transferase (GST), increased up to a B dose of 15 mg L-1. Catalase (CAT) and glutathione reductase (GR) activities increased up to 10 mg L-1 B dose but decreased at higher B levels. Proline content increased tenfold up to a B dose of 10 mg L-1, indicating an attempt to mitigate stress. Conversely, malondialdehyde (MDA) accumulation increased continuously (approximately 150%) with increasing B doses, suggesting membrane damage. Despite being considered B-sensitive, this study demonstrated that durum wheat can effectively cope with B stress up to a B dose of 10 mg L-1 under controlled conditions. Beyond this threshold, physiological and biochemical changes indicate a decline in stress tolerance. Many osmoregulators, carotenes, alkaloids, flavonoids, tocopherols, phenolic compounds, non-protein amino acids, and several unidentified metabolites are activated to support antioxidant defense. The SOS pathway and the released ROS force gene regulatory systems come into play. Following these, the ROS released in the organism are neutralized, and ionic homeostasis and cellular stress resistance are achieved.

Machine learning-based hyperspectral wavelength selection and classification of spider mite-infested cucumber leaves

Two-spotted spider mite (Tetranychus urticae) is an important greenhouse pest. In cucumbers, heavy infestations lead to the complete loss of leaf assimilation surface, resulting in plant death. Symptoms caused by spider mite feeding alter the light reflection of leaves and could therefore be optically detected. Machine learning methods have already been employed to analyze spectral information in order to differentiate between healthy and spider mite-infested leaves of crops such as tomatoes or cotton. In this study, machine learning methods were applied to cucumbers. Hyperspectral data of leaves were recorded under controlled conditions. Effective wavelengths were identified using three feature selection methods. Subsequently, three supervised machine learning algorithms were used to classify healthy and spider mite-infested leaves. All combinations of feature selection and classification methods yielded accuracy of over 80%, even when using ten or five wavelengths. These results suggest that machine learning methods are a powerful tool for image-based detection of spider mites in cucumbers. In addition, due to the limited number of wavelengths, there is also substantial potential for practical application.

Physiological Phenotyping and Biochemical Characterization of Mung Bean (Vigna radiata L.) Genotypes for Salt and Drought Stress

Vigna radiata (L.) R. Wilczek, generally known as mung bean, is a crucial pulse crop in Southeast Asia that is renowned for its high nutritional value. However, its cultivation faces substantial challenges due to numerous abiotic stresses. Here, we investigate the influence of salt and drought stress on mung bean genotypes by evaluating its morpho-physiological traits and biochemical characteristics. This phenotypic analysis revealed that both salt and drought stress adversely affected mung bean, which led to reduced plant height, leaf senescence, loss of plant biomass, and premature plant death. Reactive oxygen species (ROS) production increased under these abiotic stresses. In response, to prevent damage by ROS, the plant activates defense mechanisms to scavenge ROS by producing antioxidants. This response was validated through morpho-physiological, histological, and biochemical assays that characterized KVK Puri-3 and KVK Jharsuguda-1 as salt and drought sensitive genotypes, respectively, and Pusa ratna was identified as a drought and salt tolerant genotype.

First Report of Root Rot on Rhizome of Polygonatum kingianum Caused by Aspergillus awamori

Polygonatum kingianum Coll. et Hemsl (Huangjing), which belongs to the family Asparagaceae, is a perennial traditional Chinese herb with homologous medicinal and edible value (Liu et al., 2021). Huangjing is known to promote blood circulation; it has anti-inflammatory properties, increases immunity, and provides hypoglycemic treatments (Ma et al., 2019). Root rot-infected P. kingianum exhibited withering yellow leaves and stems, rhizome rot, slowed growth, and plant death. In recent years, with an average incidence of up to 45%, the spread of HJ root rot (rhizome and stem bases) has resulted in a significant reduction in the quality and up to 63% reduction in the yields of Sichuan Junlian (104.5°E, 28.2°N) and Guizhou Zhunyi (107.0°E, 27.7°N). After collecting the diseased samples, we used the tissue isolation method to isolate the pathogenic fungi (Wu et al., 2020). Four fungal isolates associated with root rot were obtained: HJ-G2 (two strains), HJ-G3 (one strain), HJ-G4 (one strain), and HJ-G6 (two strains), of which HJ-G2 and HJ-G6 were the dominant species. To determine pathogenicity of each strain, tests were conducted by wounding rhizomes wth an inoculation needle and the pathogen strain was inoculated onto the wound and symptoms observed. The results reveal that HJ-G6 exhibited the strongest pathogenicity against P. kingianum (Figure 1). The HJ-G6 colonies were black, grew rapidly, and produced a large number of spores (Figure 1). A spherical apical sac (conidial head) is formed at the top with two palisades of cells, metulae and phialides, which are shaped radially and produce a large number of spores with 2-5 um in diameter (Figure 2). Morphological observations revealed that the isolate was consistent with Aspergillus awamori (Naher et al., 2021). To further confirm the fungal species, the ribosomal internal transcribed spacer (ITS), β-tubulin (TUB), and elongation factor 1-alpha (EF-1a) gene regions were amplified with ITS1/ITS4, Bt2a/ Bt2b, and EF1/EF2. Primer and PCR amplification were performed as previously described (Paul et al., 2017). The sequences were compared with those obtained from GenBank. The ITS sequences (GenBank accession number OR682143) of the isolates (HJ-G6) were 100% identical to those of the strain PANCOM10 (GenBank accession number MT007535.1) of Aspergillus awamori. The EF-1a sequences (GenBank accession OR752352) of the isolates (HJ-G6) were 98% identical with strain ITEM 4777 (GenBank accession FN665402.1) of Aspergillus awamori. The TUB sequences (GenBank accession number OR752351) of the isolate (HJ-G6) were 100% identical with strain AF158 (GenBank accession MH781275.1) of Aspergillus awamori. Three maximum likelihood trees were constructed using MEGA v5.0 (Kumar et al., 2018) based on the sequences (ITS, TUB, and EF-1a) of the HJ-G6 strain and that of Aspergillus spp. previously deposited in GenBank (Paul et al., 2017). Phylogenetic analysis showed that HJ-G6 belonged to the Aspergillus awamori clade (Figure 3). Combined with morphological analysis and DNA sequencing, HJ-G6 was identified as Aspergillus awamori. To verify pathogenicity, P. kingianum roots were inoculated with the colonized agar discs of the isolates. P. kingianum plants inoculated with uncolonized agar discs were used as controls. After inoculation, P. kingianum roots were moved to the inoculation chamber under high humidity at 28 °C for 1 d and then transferred to a greenhouse. Previous studies have reported that Fusarium sp. are root rot pathogens in the rhizomes of medicinal plants (Pang et al., 2022; Song et al., 2023). In this study, HJ-G2, HJ-G3, and HJ-G4 were used as the positive controls. Typical symptoms of root rot appeared 3 days after inoculation and were similar to those observed in the field, whereas the control plants remained symptomless. According to the results of the inoculation experiment, the pathogenicity of Aspergillus awamori to P. kingianum root rot was significantly stronger than that of Fusarium (Figure 1). The pathogen was isolated from the rotting root of P. kingianum and the ITS region was sequenced again. Alignment analysis of the ITS sequences revealed that the causal agents were consistent with those of the original isolates. These studies fulfill Koch’s postulates. As far as we know, this is the first report of Aspergillus awamori causing root rot in P. kingianum.

Harmfulness and biological characters of a leaf beetle Gastrolina depressa (Coleoptera: Chrysomelidae) to its host plant Pterocarya stenoptera (Fagales: Juglandaceae)

Gastrolina depressa (Coleoptera: Chrysomelidae) has been found to damage many walnut plants in China. It prefers to feed on the annual leaves of an important economic plant, Pterocarya stenoptera (Fagales: Juglandaceae), and causes extensive cosmetic destruction, even plant death. Nevertheless, its biological characteristics are mostly unknown. In this study, we investigate the harmful and biological characteristics of G. depressa with different developmental stages. The results showed that G. depressa had four developmental stages: egg, larva (1st -3rd instar), pupa, and adult, the life history lasted nine days, with obvious overlapping generations. The food intake of the larvae increased with the increase of the instar, and the maximum food intake of the 3rd instar larvae was 448.19 mm2. The abdomen of the females was enlarged before oviposition, and the average number of eggs laid was 47.63 ± 13.53. Bioassay showed that there was no difference in the search time for the young (2.03, 1.25, 1.15, and 0.91 min) and old leaves (1.68, 1.15, 0.90, and 1.93 min) of P. stenoptera between 1st -3rd instar larvae and adults; the feeding preference of 1st -3rd instar larvae and adults for young leaves was higher than that to old leaves (23.33%, 26.67%, 33.33%, and 21.67%, respectively). The successful selection rates of 1st -3rd instar larvae and adults to young leaves (81.67%, 80%, 85.00%, and 70.00%, respectively) was higher than to old leaves (8.35%, 11.67%, 3.34%, and 11.67%, respectively).

Resistência de poáceas forrageiras ao Blissus pulchellus Montandon (Hemiptera: Blissidae)

ABSTRACT Chinch bugs [Blissus pulchellus Montandon (Hemiptera: Blissidae)] suck the phloem from susceptible forage grasses, injecting toxins that destroy plant vessels and compromise the flow of water and nutrients, leading to plant death. Thus, the aim of this study was to assess eight forage grasses for antixenosis resistance to B. pulchellus and compare the anatomical characteristics of leaf sheath tissue from resistant and susceptible species/cultivars. Experiments were conducted in a laboratory and greenhouse, using choice and no-choice tests with the following forage grasses: Urochloa ruziziensis, U. humidicola, U. brizantha ‘Piatã’, U. brizantha ‘Paiaguás’, U. brizantha ‘Marandu’, Panicum maximum ‘Mombaça’, P. maximum ‘Zuri’, and Andropogon gayanus. The oviposition results demonstrated that in the choice test there was a change in the stink bug’s behavior in relation to grasses four hours after infestation, with U. humidicola, P. maximum ‘Mombaça’ and ‘Zuri’, U. brizantha ‘Marandu’ and A. gayanus, proving to be less attractive to insects. It is concluded that U. humidicola, P. maximum ‘Mombaça’ and ‘Zuri’, U. brizantha ‘Marandu’, and A. gayanus are less attractive to B. pulchellus. A. gayanus and P. maximum ‘Mombaça’ and ‘Zuri’ showed non-preference resistance (antixenosis) to oviposition by B. pulchellus. The resistance of U. humidicola, P. maximum ‘Zuri’, and A. gayanus to B. pulchellus may be associated with greater compaction and lignification of the parenchyma and sclerenchyma cells of leaf sheaths.

Smart watering of ornamental plants: exploring the potential of decision trees in precision agriculture based on IoT

Ornamental plant farmers face various challenges due to climate change and environmental stress that significantly affect plant health and growth. This research overcomes these challenges by developing an intelligent watering system that uses internet of things (IoT) technology and decision trees (DTs) algorithms to optimize the use of planting land by ensuring plants grow in the most optimal conditions, both in terms of water and nutrients and increase land productivity. The system is built by integrating various sensors to monitor soil moisture, air humidity, temperature, and light intensity in real-time. The collected data is used to automate watering schedules and provide recommendations on suitable plant species based on the soil nutrient content of nitrogen (N), phosphorus (P), and potassium (K). The use of the DTs algorithm helps in analyzing the data from the sensors and providing recommendations on the most suitable plants for the land. The smart watering system was tested in three zones, each simulating a different watering scenario, and successfully maintained optimal conditions for plant growth in each zone. The machine learning (ML) model with the DTs algorithm can predict the right type of ornamental plants based on the existing land conditions in three watering zones, with an accuracy of 89 %, 90 %, and 91 %, respectively. Furthermore, farmers can follow these recommendations to minimize damage and death of plants so that the level of productivity on the land becomes optimal.

Role of Quaternary Aminoacid Derivatives and Ion Homeostasis in Amelioration of Salinity Stress

Salinity is a detriment to plant production throughout the world. Salinity impacts the quality of irrigation water. Understanding salt stress in plants necessitates complex physiological and metabolic stages. Preserving turgescent cells and regulating the water potential to maintain a proper water balance among the key responsibilities of osmoprotectants, long-term, high salt doses can slow down plant growth and development by interfering with physiological processes like nutrient imbalance, membrane damage, enzyme inhibition and metabolic dysfunctions like photosynthesis, hormone production and ion homeostasis, all of which can result in plant death. Hyperionic and hyperosmotic stress are also caused by prolonged, high salt doses. Osmolytes (such as proline and glycine betaine) accumulate under different salt levels, antioxidant enzyme activities increase and eventually some of the negative effects of NaCl toxicity on plants are mitigated. Plants under salt stress may have higher concentrations of reactive oxygen species (ROS) such as superoxide radicals (O2) and hydrogen peroxide (H2O2). Ion homeostasis is crucial for plants during abiotic stress conditions.

Molecular Characterization and Pathogenicity of Groundnut Bud Necrosis Virus (Orthotospovirus arachinecrosis) Inducing Necrosis in Black Gram

Orthotospovirus arachinecrosis commonly known as Groundnut bud necrosis virus (GBNV), is the causal agent for necrosis disease in black gram. GBNV is the second most important challenge to black gram production in major growing areas following yellow mosaic disease. Symptoms of necrosis disease of black gram include severe downward curling and twisting of leaf lamina, veinal necrosis, petiole necrosis, bud necrosis, and necrotic streaks on the stem. Infection at early growth stages of black gram leads to plant death, while surviving plants exhibited stunted growth with a significant reduction in pod yield. The GBNV-BG isolate was maintained in pure form on cowpea cv. C-152, resulted in chlorotic and necrotic local lesions on primary leaves at seven days post-inoculation. The pathogenicity of GBNV on black gram (LBG-645) was further confirmed by artificial sap inoculation. Amplification of the coat protein gene of GBNV was confirmed through RT-PCR using gene-specific primers, producing an amplicon of 800 bp. Sequence analysis of the coat protein gene revealed that the present study isolates OQ683310 and OR295403 shared sequence identity of 98.0 % and 99.3 % respectively at the nucleotide level, with other isolates in the NCBI database. The phylogenetic analysis of the coat protein gene revealed that the isolates under this study were closely linked with the GBNV tomato isolate from Tamil Nadu (MN718651 and MZ505083).

Identification and Characterization of Ralstonia solanacearum Species Complex from Ginger (Zingiber officinale) in Semarang Regency, Indonesia

The Ralstonia solanacearum species complex is a highly destructive plant pathogen with a remarkably broad range of hosts, and ongoing discoveries continue to expand its host list. In May 2023, a new type of bacterial wilt affecting ginger (Z. officinale) crops in Semarang Regency, Central Java was reported. Early symptoms included sudden withering of leaves in adult plants followed by complete wilting and darkening of the vasculature, ultimately leading to plant death. This research specifically investigates the spread of Ralstonia solanacearum Species Complex within ginger cultivation in Semarang Regency. Twenty bacterial isolates were collected from soil and diseased Z. officinale plants at twenty different locations. Physiological and biochemical analyses confirmed that the causative agent for Z. officinale bacterial wilt was Ralstonia solanacearum belonging to biovar 3 and 4. The study also revealed that the distribution of this pathogen remains focused in the Banyubiru and Sumowono sub-districts. These findings will enhance our understanding of how Ralstonia solanacearum Species Complex spreads among ginger crops and its impact on them.

Insights into response of seagrass (Zostera marina) to sulfide exposure at morphological, physiochemical and molecular levels in context of coastal eutrophication and warming.

Sulfide in sediment porewaters, is toxic to rooted macrophytes in both marine and freshwater environments. Current research on sulfide stress in seagrasses primarily focuses on morphological and physiological aspects, with little known about the molecular response and resistance mechanisms. This study first investigated the damage caused by sulfide to eelgrass (Zostera marina L.) using transcriptomic, metabolomic, and other physiological and biochemical indicators and explored the potential resistance of eelgrass at molecular level through laboratory simulated and in-situ sulfide stress experiments. Comprehensive results showed that sulfide stress severely inhibited the growth, photosynthesis, and antioxidant enzyme activities of eelgrass. Importantly, transcriptome analysis revealed significant activation of pathways related to carbohydrate and sulfur metabolism. This activation served a dual purpose: providing an energy source for eelgrass stress response and achieving detoxification through accelerated sulfur metabolism-a potential resistance mechanism. The toxicity of sulfide increased with rising temperature as evidenced by a decrease in EC50. Results from recovery experiments indicated that when Fv/Fm reduced to about 0 under sulfide stress, the growth and photosynthesis of eelgrass recovered to normal level after timely removal of sulfide. However, prolonged exposure to sulfide resulted in failure to recover, leading ultimately to plant death. This study not only enhances our understanding of the molecular-level impacts of sulfide on seagrasses but also provides guidance for the management and ecological restoration of seagrass meadows under sulfide stress.

Abscisic acid regulates Cl- efflux via the ABI5-ZAT10-SLAH3 module in chloride-stressed Malus hupehensis.

The overload of Cl- typically causes cell damage and death in plants, especially in Cl--sensitive crops. Abscisic acid (ABA) is a stress-induced phytohormone that can alleviate chloride stress by reducing Cl- accumulation; however, the mechanism is not clear. Here, we found that the application of ABA elevated Cl- efflux from roots and reduced membrane damage and cell death in chloride-stressed Malus hupehensis. MhSLAH3, a homolog of the slow anion channel from M. hupehensis, encoded a channel controlling Cl- efflux and was induced by both chloride and ABA. MhSLAH3 overexpression accelerated Cl- efflux, which enhanced the tolerance of M. hupehensis to chloride stress, and retarded chloride-induced cell death. However, the suppression of MhSLAH3 partially offset the acceleration effect of ABA on Cl- efflux. MhZAT10L was then identified as a C2H2-type transcription factor upstream of MhSLAH3, repressing MhSLAH3 transcription under chloride stress. The suppression of MhZAT10L accelerated Cl- efflux by releasing suppressed MhSLAH3, but MhZAT10L overexpression counteracted the effects of ABA on Cl- efflux. MhABI5 promoted Cl- efflux mediated by MhSLAH3 due to induction by ABA and transcriptional repression of MhZAT10L, but this function of MhABI5 was reversed by MhZAT10L overexpression. The suppression of MhABI5 diminished the positive effects of ABA on Cl- efflux and retarding cell death. Thus, ABA repressed MhZAT10L transcription by activating MhABI5, further releasing MhSLAH3 to accelerate Cl- efflux. These findings provide a new evidence of ABA regulation of Cl- efflux.

Analyzing the defense response mechanism of Atractylodes macrocephala to Fusarium oxysporum through small RNA and degradome sequencing.

Fusarium oxysporum is a significant soil-borne fungal pathogen that affects over 100 plant species, including crucial crops like tomatoes, bananas, cotton, cucumbers, and watermelons, leading to wilting, yellowing, growth inhibition, and ultimately plant death. The root rot disease of A. macrocephala, caused by F. oxysporum, is one of the most serious diseases in continuous cropping, which seriously affects its sustainable development. In this study, we explored the interaction between A. macrocephala and F. oxysporum through integrated small RNA (sRNA) and degradome sequencing to uncover the microRNA (miRNA)-mediated defense mechanisms. We identified colonization of F. oxysporum in A. macrocephala roots on day 6. Nine sRNA samples were sequenced to examine the dynamic changes in miRNA expression in A. macrocephala infected by F. oxysporum at 0, 6, and 12 days after inoculation. Furthermore, we using degradome sequencing and quantitative real-time PCR (qRT-PCR), validated four miRNA/target regulatory units involved in A. macrocephala-F. oxysporum interactions. This study provides new insights into the molecular mechanisms underlying A. macrocephala's early defense against F. oxysporum infection, suggesting directions for enhancing resistance against this pathogen.