Cultivars Research Articles

Possibilities of using the tetraploid interspecific hybrid <i>Hordeum bulbosum</i> L. × <i>Hordeum vulgare</i> L. in obtaining new recombinant barley lines

Background. Hordeum bulbosum L. is the only wild species of the genus Hordeum, the gene pool of which is successfully used in introgressive hybridization to increase the genetic diversity of H. vulgare L. When creating introgression forms based on hybrids of H. vulgare with H. bulbosum, it is necessary to take into consideration the ploidy of the parent species, and their genetic features that determine the intensity of the process of H. bulbosum chromosomes elimination in embryogenesis. The purpose of our investigation was to study the features associated with the elimination of bulbous barley chromosomes in embryos obtained in various combinations of crosses involving the tetraploid hybrid H. bulbosum with H. vulgare for its effective use in obtaining introgression lines of H. vulgare. Material and methods. The analysis was performed on 9-15 days old embryos obtained in crosses of the tetraploid hybrid F2 (H. bulbosum A17 (4x) × H. vulgare ‘Borwina’ (4x)) (HbHbHvHv) with ‘Igri’ (2x) and ‘Borwina’ (2x) barley varieties, with H. bulbosum A17 (4x), as well as during its self-pollination. The chromosomal composition of embryos of different ages was analyzed on squashed embryo slides using genomic in situ hybridization (GISH). Results. Among the 11-15 days old embryos obtained from self-pollination of the hybrid, approximately half of the studied ones were mixoploids, while in other embryos the majority of cells contained only the genomic material of H. vulgare. The elimination process was very intensive in crosses of the hybrid with the barley varieties ‘Igri’ (2x) and ‘Borwina’ (2x), and by day 10-11 after pollination cells containing only the genomic material of H. vulgare predominated in all embryos, regardless of the direction of crossing and the variety used. Hybrid embryos with a stable chromosomal composition resulted from a cross of a tetraploid hybrid with H. bulbosum A17 (4x). Embryos with recombinant H. vulgare chromosomes carrying alien genetic material of bulbous barley were identified in all types of crosses. Conclusion. The most efficient way for the mass production of introgression lines of cultivated barley varieties based on the partially fertile hybrid F2 (H. bulbosum A17 (4x) × H. vulgare ‘Borwina’ (4x)), is the crossing with varieties of H. vulgare (2x). The progeny from such crosses will contain only cultivated barley plants, among which it is possible to identify forms with the introgression of H. bulbosum and use already the first generation from their self-pollination for selecting H. vulgare lines carrying the genetic material of bulbous barley in both homologs.

Variation in Fruit Traits and Seed Nutrient Compositions of Wild Camellia oleifera: Implications for Camellia oleifera Domestication

Camellia oleifera is a woody oil crop with the highest oil yield and the largest cultivation area in China, and C. oleifera seed oil is a high-quality edible oil recommended by the Food and Agriculture Organization of the United Nations. The objectives of this study were to investigate the variation in fruit yield traits and seed chemical compositions of wild C. oleifera in China and to identify the differences between wild C. oleifera and cultivated varieties. In this study, we collected wild C. oleifera samples from 13 sites covering the main distribution areas of wild C. oleifera to comprehensively evaluate 25 quantitative traits of wild C. oleifera fruit and seed chemical compositions and collected data of 10 quantitative traits from 434 cultivated varieties for a comparative analysis of the differences between wild and cultivars. The results showed that the coefficients of variation of the 25 quantitative traits of wild C. oleifera ranged from 2.605% to 156.641%, with an average of 38.569%. The phenotypic differentiation coefficients ranged from 25.003% to 99.911%, with an average of 77.894%. The Shannon–Wiener index (H’) ranged from 0.195 to 1.681. Based on the results of principal component analysis (PCA) and phenotypic differentiation coefficients, 10 traits differed significantly between wild C. oleifera and cultivated varieties, while the differentiation coefficients (VST) for fresh fruit weight, oleic acid, unsaturated fatty acids, stearic acid, and saturated fatty acids were more than 95%, of which fresh fruit weight and oleic acid content were potential domestication traits of C. oleifera. The results of this study can contribute to the efficient excavation and utilization of wild C. oleifera genetic resources for C. oleifera breeding.

Altitudinal variation of dragon fruit metabolite profiles as revealed by UPLC-MS/MS-based widely targeted metabolomics analysis

BackgroundGeographical factors affect the nutritional, therapeutic and commercial values of fruits. Dragon fruit (Hylocereus spp) is a popular fruit in Asia and a potential functional food with diverse pharmacological attributes. Although it is produced in various localities, the information related to the altitudinal variation of dragon fruit nutrients and active compounds is scarce. Hence, this study aimed to investigate the variations in metabolite profiles of H. polyrhizus (variety Jindu1) fruit pulps from three different altitudes of China, including Wangmo (WM, 650 m), Luodian (LD, 420 m), and Zhenning (ZN, 356 m). Jindu1 is the main cultivated pitaya variety in Guizhou province, China.ResultsThe LC-MS (liquid chromatography-mass spectroscopy)-based widely targeted metabolic profiling identified 645 metabolites, of which flavonoids (22.64%), lipids (13.80%), phenolic acids (12.40%), amino acids and derivatives (10.39%), alkaloids (8.84%), and organic acids (8.37%) were dominant. Multivariate analyses unveiled that the metabolite profiles of the fruit differed regarding the altitude. Fruits from WM (highest altitude) were prime in quality, with higher levels of flavonoids, alkaloids, nucleotides and derivatives, amino acids and derivatives, and vitamins. Fruits from LD and ZN had the highest relative content of phenolic acids and terpenoids, respectively. We identified 69 significantly differentially accumulated metabolites across the pulps of the fruits from the three locations. KEGG analysis revealed that flavone and flavonol biosynthesis and isoflavonoid biosynthesis were the most differentially regulated. It was noteworthy that most active flavonoid compounds exhibited an increasing accumulation pattern along with the increase in altitude. Vitexin and isovitexin were the major differentially accumulated flavonoids. Furthermore, we identified two potential metabolic biomarkers (vitexin and kaempferol 3-O-[2-O-β-D-galactose-6-O-a-L-rhamnose]-β-D-glucoside) to discriminate between dragon fruits from different geographical origins.ConclusionOur findings provide insights into metabolic changes in dragon fruits grown at different altitudes. Furthermore, they show that growing pitaya at high altitudes can produce fruit with higher levels of bioactive compounds, particularly flavonoids.

ЭКОНОМИЧЕСКАЯ ЭФФЕКТИВНОСТЬ ВОЗДЕЛЫВАНИЯ СОВРЕМЕННЫХ СОРТОВ РАПСА

The formation of varietal resources is a powerful factor ensuring food security of the country. The purpose of our research is to analyze the production of modern varieties and hybrids of spring rapeseed in the conditions of Western Siberia (on the example of the southern forest-steppe of the Omsk region) and to determine the economic efficiency of their cultivation. Methods of mathematical, statistical analysis of data from published official statistical sources were used. The prime costs, revenues and cost recovery for the cultivation of domestic varieties Yubileyny and 55region, foreign varieties (Heros) and hybrid (PR46X75) are calculated. The data on the structure of prime costs of spring rapeseed are presented, where the largest share of costs is accounted for by plant protection products (32.8%), and approximately equal shares (10.5-13%) are accounted for by labor remuneration, maintenance of fixed assets and other basic costs. The share of seed costs depends on the seed material and varies from 3% for varieties to 10% for hybrids. On average for the years of research (2021-2023) the maximum oilseed yield was observed in hybrid PR46X75 - 2.23 t/ha, where the net income amounted to 56547 rubles/ha, but the cost recovery in this variant is the lowest - 4.82, due to high costs (14813 rubles/ha) in comparison with the cultivation of varieties of Siberian breeding Yubileyny and 55region, whose indicators amounted to 51202-54590 rubles/ha, 5.21-5.22 and 12158-12930 rubles/ha, respectively. The highest profitability was achieved in the cultivation of the spring rapeseed varieties 55region (422%) and Yubileyny (421%), and the lowest - in the hybrid PR46X75 - 382%.

Transcriptome Analysis and Validation of Anthracnose Resistance Genes in Walnut Varieties

Anthracnose is extremely detrimental to walnut production, because it seriously affects its yield. Therefore, this study aimed to identify anthracnose resistance genes in walnuts, to lay the foundation for cultivating novel anthracnose-resistant walnut varieties. In this study, the fruits of walnut varieties “Qinyou 1” and “Qinyou 2”, exhibiting relatively weak resistance to anthracnose, were used for transcriptome sequencing and identifying differentially expressed genes (DEGs). Thereafter, we used a quantitative real-time polymerase chain reaction to verify the reliability of the transcriptome data using the walnut varieties Qinyou 1, Qinyou 2, Qinyou 3, Liaohe 1, and Diamond 1. We identified 6326 DEGs post-infection in Qinyou 1, of which 3065 were upregulated and 3261 were downregulated. We also found 2055 DEGs (969 upregulated and 1086 downregulated genes) in the two varieties, after 6 days of anthracnose infection. Based on GO and KEGG enrichment analyses of the transcriptome data, we noted that the DEGs were primarily involved in metabolic processes, cell composition, cell structure, catalytic activity, and binding activity. Furthermore, KEGG functional enrichment analysis showed that the amino acid biosynthesis pathway and plant–pathogen interaction may be activated under anthracnose infection. We also noted that the expression levels of anthracnose resistance genes in different walnut varieties were significantly different. Thus, the findings of this study provide important genetic resources and molecular markers for the cultivation of novel anthracnose-resistant walnut varieties.

Mutations of PsPALM1a and PsPALM1b associated with the afila phenotype in Pea.

Semi-leafless represents an advantageous plant architecture in pea breeding due to its ability to enhance resistance to lodging and potentially to powdery mildew. The introduction of semi-leafless pea varieties is considered a seminal advancement in pea breeding over the past half-century. The afila (af) mutation leads to the replacement of lateral leaflets by highly branched tendrils; combined with the semi-dwarfing le mutation, it forms the semi-leafless cultivated variety. In this study, we identified that mutations in two tandemly-arrayed genes encoding Cys(2)His(2) zinc finger transcription factors, PsPALM1a and PsPALM1b, were closely associated with the afila phenotype. These two genes may be deleted in the af mutant. In situ hybridization showed that both genes exhibit specific expression in early leaflet primordia. Furthermore, suppression of PsPALM1a/PsPALM1b resulted in a high frequency of conversion of lateral leaflets into tendrils. In conclusion, our study provides genetic evidence demonstrating that mutations in PsPALM1a and PsPALM1b are responsible for the af locus, contributing to a better understanding of compound leaf formation in peas and offering new insights for breeding applications related to afila.

CsMOF1-guided regulation of drought-induced theanine biosynthesis in Camellia sinensis

The distinctive flavor and numerous health benefits of tea are attributed to the presence of theanine, a special amino acid found in tea plants. Nitrogen metabolite is greatly impacted by drought; however, the molecular mechanism underlying the synthesis of theanine in drought-stricken tea plants is still not clear. Through the drought transcriptome data of tea plants, we have identified a gene CsMOF1 that appears to play a role in theanine biosynthesis under drought stress, presenting a significantly negative correlation with both theanine content and the expression of CsGS1. Further found that CsMOF1 is a transcription factor containing a MYB binding domain, localized in the nucleus. Upon silencing CsMOF1, there was a prominent increase in the level of the theanine and glutamine, as well as the expression of CsGS1, while glutamic acid content decreased significantly. Conversely, overexpression of CsMOF1 yielded opposite effects. Dual luciferase reporter assay and electromobility shift assays demonstrated that CsMOF1 binds to the promoter of CsGS1, thereby inhibiting its activity. These results indicate that CsMOF1 plays a crucial role in theanine biosynthesis in tea plants under drought stress, acting as a transcriptional repressor related to theanine biosynthesis. This study provides new insights into the tissue-specific regulation of theanine biosynthesis and aids with the cultivation of new varieties of tea plants.

Time Series Field Estimation of Rice Canopy Height Using an Unmanned Aerial Vehicle-Based RGB/Multispectral Platform

Crop plant height is a critical parameter for assessing crop physiological properties, such as above-ground biomass and grain yield and crop health. Current dominant plant height estimation methods are based on digital surface model (DSM) and vegetation indexes (VIs). However, DSM-based methods usually estimate plant height by growth stages, which would result in some discontinuity between growth stages due to different fitting curves. Additionally, there has been limited research on the application of VI-based plant height estimation for multiple crop species. Thus, this study investigated the validity and challenges associated with these methods for estimating canopy heights of multi-variety rice throughout the entire growing season. A total of 474 rice varieties were cultivated in a single season, and RGB images including red, green, and blue bands, DSMs, multispectral images including near infrared and red edge bands, and manually measured plant heights were collected in 2022. DSMs and 26 commonly used VIs were employed to estimate rice canopy heights during the growing season. The plant height estimation using DSMs was performed using different quantiles (50th, 75th, and 95th), while two-stage linear regression (TLR) models based on each VI were developed. The DSM-based method at the 95th quantile showed high accuracy, with an R2 value of 0.94 and an RMSE value of 0.06 m. However, the plant height estimation at the early growth stage showed lower effectiveness, with an R2 < 0. For the VIs, height estimation with MTCI yielded the best results, with an R2 of 0.704. The first stage of the TLR model (maximum R2 = 0.664) was significantly better than the second stage (maximum R2 = 0.133), which indicated that the VIs were more suitable for estimating canopy height at the early growth stage. By grouping the 474 varieties into 15 clusters, the R2 values of the VI-based TLR models exhibited inconsistencies across clusters (maximum R2 = 0.984; minimum R2 = 0.042), which meant that the VIs were suitable for estimating canopy height in the cultivation of similar or specific rice varieties. However, the DSM-based method showed little difference in performance among the varieties, which meant that the DSM-based method was suitable for multi-variety rice breeding. But for specific clusters, the VI-based methods were better than the DSM-based methods for plant height estimation. In conclusion, the DSM-based method at the 95th quantile was suitable for plant height estimation in the multi-variety rice breeding process, and we recommend using DSMs for plant height estimation after 26 DAT. Furthermore, the MTCI-based TLR model was suitable for plant height estimation in monoculture planting or as a correction for DSM-based plant height estimation in the pre-growth period of rice.

Impact of Urdbean Leaf Crinkle Disease on Growth and Yield of Urdbean (Vigna mungo L. Hepper) Genotypes

Blackgram (Vigna mungo (L.) Hepper), also known as urdbean, stands as a significant pulse crop cultivated globally. Among the viral diseases documented in blackgram, Urdbean Leaf Crinkle Disease (ULCD) emerges as particularly devastating, leading to substantial economic losses contingent upon factors such as seasonal variations and cultivated varieties. In this study, six cultivars of urdbean (M114, M218, M338, T9, N7, and M1008) were subjected to scrutiny regarding their growth and yield-related attributes under ULCD infection. Employing a randomized block design (RBD), data pertaining to each yield-contributing factor were meticulously recorded from both healthy and infected urdbean plants and analysed using two way ANOVA. A pronounced reduction across all yield parameters was noted in virus-infected plants, manifesting in diminished plant height by 2.02-37.01%, pod size by 1.10-51.30%, seed/pod ratio by 4.41-61.46%, 100-seed weight by 2.73%-51.37%, pod number per plant by 3.72-63.86%, and number of branches per plant ranging from 0.84 to 48.43%. Upon comparative analysis of all urdbean genotypes, it can be deduced that genotypes M114, M218, and M338 exhibit lesser susceptibility to urdbean leaf crinkle disease, thereby positioning them as promising candidates for breeding programs and cultivation endeavors aimed at achieving higher yields.

Phenomics and transcriptomic profiling of fruit development in distinct apple varieties

Apple is one of the most economically important and popular temperate fruit trees. The domestication of apple has resulted in substantial phenotypic differences, particularly between wild and cultivated varieties. However, the relationship between gene expression and phenotypic variations in apple remains poorly understood. Here, we present a comprehensive dataset featuring five distinct apple varieties, including two wild varieties and three representative cultivated varieties. The dataset comprises of both phenomics data, encompassing twelve fruit quality-related traits continuously measured over two years, and transcriptomic data obtained at different developmental stages with three biological replicates. We performed basic quality control process, gene expression normalization and differential gene expression analysis to demonstrate the utility and reliability of the dataset. Our findings indicate that gene expression strongly related with phenotypic variations in apple. This dataset serves as a valuable resource, encompassing phenomics and transcriptomic data in multiple formats, thereby facilitating further exploration of the relationships between gene expression and phenotypic traits in apple.

Prospects for the use of growth regulators in vegetative propagation technology of La-vandula angustifolia

Lavenders include some 28 species of evergreen aromatic shrubs and subshrubs belonging to the mint family, the Lamiaceae. They occur mainly around the Mediterranean and their flowers range from pink to purple and white. It is known that Lavandula angustifolia Mill. is an unpretentious decorative and essential oil crop that is widely used in the pharmaceutical, cosmetic, and food industries. Therefore, the planting material of this crop is in great demand in Ukraine. Cultivated varieties of lavender are very different for vegetative reproduction. A promising path is the testing for new effective and environmentally friendly rooting stimulants. The experiments were conducted in the Horticulture Laboratory of the Khortytsiа National Academy. The study tested the influence of aqueous solutions of a complex of amino acids, polypeptides, amino sugars, hexuronic acids, and microelements called “Bioglobin”, a complex of inorganic compounds containing (nitrogen – 4.7%, phosphorus – 3.4%, potassium – 4.6%, iron – 1.6%, zinc – 1.6%) and organic compounds (alginate acid, betaine, polysaccharides, vitamin complex of groups B, C, D) called “Ferti Root”, a complex of saturated and unsaturated fatty acids (C14–C28), polysaccharides, 15 amino acids, analogs of cytokinin and auxin nature phytohormones called “Emistim S”, a complex of 2.6-dimethylpyridine-1-oxide with α-phenylacetic acid called “Charkor”, disodium salt of 2-(quinolin-4-ylthio) succinic acid on the rooting and development of varieties "Stepova", "Vdala", "Sineva" one-year woodcuttings. The indicators were evaluated in comparison with the control without processing the cuttings before planting, and with the use of (4-(indol-3-yl) butyric acid) called “Kornevin”. Mother plants are 2–3 years old. The experiment was repeated three times, 30 cuttings each. Woodсuttings were planted in open-door ground at early October. In May, the number of rooted cuttings, as well as the number and length of roots was counted. It was found that two preparations had the maximum positive effect on the cuttings rooting: disodium salt of 2-(quinolin-4-ylthio) succinic acid at a concentration of 5 mg/L and “Ferti Root”. Consequently, the rooting percentage increased by 18–20% in all researched varieties compared to the control. The length and number of new formed roots in these experimental versions exceeded the control indicators by 1.5–2.0 times. Other researched preparations did not show a positive effect on the rooting cuttings indicators.

Metabolomic profiling of wild rooibos (Aspalathus linearis) ecotypes and their antioxidant-derived phytopharmaceutical potential

IntroductionAspalathus linearis (commonly known as rooibos) is endemic to the Cape Floristic Region of South Africa and is a popular herbal drink and skin phytotherapeutic ingredient, with health benefits derived primarily from its unique phenolic content. Several, seemingly habitat-specific ecotypes from the Cederberg (Western Cape) and Northern Cape have morphological, ecological, genetic and biochemical differences.Objectives and methodsDespite the commercial popularity of the cultivated variety, the uncultivated ecotypes are largely understudied. To address gaps in knowledge about the biochemical constituency, ultra-performance liquid chromatography-mass spectrometry analysis of fifteen populations was performed, enabling high-throughput metabolomic fingerprinting of 50% (v/v) methanolic extracts. Antioxidant screening of selected populations was performed via three assays and antimicrobial activity on two microbial species was assessed. The metabolomic results were corroborated with total phenolic and flavonoid screening of the extracts.Results and discussionSite-specific chemical lineages of rooibos ecotypes were confirmed via multivariate data analyses. Important features identified via PLS-DA disclosed higher relative abundances of certain tentative metabolites (e.g., rutin, aspalathin and apiin) present in the Dobbelaarskop, Blomfontein, Welbedacht and Eselbank sites, in comparison to other locations. Several unknown novel metabolites (e.g., m/z 155.0369, 231.0513, 443.1197, 695.2883) are responsible for metabolomic separation of the populations, four of which showed higher amounts of key metabolites and were thus selected for bioactivity analysis. The Welbedacht and Eselbank site 2 populations consistently displayed higher antioxidant activities, with 2,2-azino-bis (3-ethylbenzothiazoline-6-sulphonic acid) (ABTS) radical scavenging activities of 679.894 ± 3.427 µmol Trolox/g dry matter and 635.066 ± 5.140 µmol Trolox/g dry matter, respectively, in correlation with a high number of phenolic and flavonoid compounds. The contribution of the individual metabolites to the pharmacological effectiveness of rooibos remains unknown and as such, further structural elucidation and phytopharmacological testing is thus urgently needed.

A cluster of putative resistance genes is associated with a dominant resistance to sunflower broomrape.

The HaOr5 resistance gene is located in a large genomic insertion containing putative resistance genes and provides resistance to O. cumana, preventing successful connection to the sunflower root vascular system. Orobanche cumana (sunflower broomrape) is a parasitic plant that is part of the Orobanchaceae family and specifically infests sunflower crops. This weed is an obligate parasitic plant that does not carry out photosynthetic activity or develop roots and is fully dependent on its host for its development. It produces thousands of dust-like seeds per plant. It possesses a high spreading ability and has been shown to quickly overcome resistance genes successively introduced by selection in cultivated sunflower varieties. The first part of its life cycle occurs underground. The connection to the sunflower vascular system is essential for parasitic plant survival and development. The HaOr5 gene provides resistance to sunflower broomrape race E by preventing the connection of O. cumana to the root vascular system. We mapped a single position of the HaOr5 gene by quantitative trait locus mapping using two segregating populations. The same location of the HaOr5 gene was identified by genome-wide association. Using a large population of thousands of F2 plants, we restricted the location of the HaOr5 gene to a genomic region of 193kb. By sequencing the whole genome of the resistant line harboring the major resistance gene HaOr5, we identified a large insertion of a complex genomic region containing a cluster of putative resistance genes.

Integrative physiology and transcriptome reveal salt-tolerance differences between two licorice species: Ion transport, Casparian strip formation and flavonoids biosynthesis

BackgroundGlycyrrhiza inflata Bat. and Glycyrrhiza uralensis Fisch. are both original plants of ‘Gan Cao’ in the Chinese Pharmacopoeia, and G. uralensis is currently the mainstream variety of licorice and has a long history of use in traditional Chinese medicine. Both of these species have shown some degree of tolerance to salinity, G. inflata exhibits higher salt tolerance than G. uralensis and can grow on saline meadow soils and crusty saline soils. However, the regulatory mechanism responsible for the differences in salt tolerance between different licorice species is unclear. Due to land area-related limitations, the excavation and cultivation of licorice varieties in saline-alkaline areas that both exhibit tolerance to salt and contain highly efficient active substances are needed. The systematic identification of the key genes and pathways associated with the differences in salt tolerance between these two licorice species will be beneficial for cultivating high-quality salt-tolerant licorice G. uralensis plant varieties and for the long-term development of the licorice industry. In this research, the differences in growth response indicators, ion accumulation, and transcription expression between the two licorice species were analyzed.ResultsThis research included a comprehensive comparison of growth response indicators, including biomass, malondialdehyde (MDA) levels, and total flavonoids content, between two distinct licorice species and an analysis of their ion content and transcriptome expression. In contrast to the result found for G. uralensis, the salt treatment of G. inflata ensured the stable accumulation of biomass and total flavonoids at 0.5 d, 15 d, and 30 d and the restriction of Na+ to the roots while allowing for more K+ and Ca2+ accumulation. Notably, despite the increase in the Na+ concentration in the roots, the MDA concentration remained low. Transcriptome analysis revealed that the regulatory effects of growth and ion transport on the two licorice species were strongly correlated with the following pathways and relevant DEGs: the TCA cycle, the pentose phosphate pathway, and the photosynthetic carbon fixation pathway involved in carbon metabolism; Casparian strip formation (lignin oxidation and translocation, suberin formation) in response to Na+; K+ and Ca2+ translocation, organic solute synthesis (arginine, polyamines, GABA) in response to osmotic stresses; and the biosynthesis of the nonenzymatic antioxidants carotenoids and flavonoids in response to antioxidant stress. Furthermore, the differential expression of the DEGs related to ABA signaling in hormone transduction and the regulation of transcription factors such as the HSF and GRAS families may be associated with the remarkable salt tolerance of G. inflata.ConclusionCompared with G. uralensis, G. inflata exhibits greater salt tolerance, which is primarily attributable to factors related to carbon metabolism, endodermal barrier formation and development, K+ and Ca2+ transport, biosynthesis of carotenoids and flavonoids, and regulation of signal transduction pathways and salt-responsive transcription factors. The formation of the Casparian strip, especially the transport and oxidation of lignin precursors, is likely the primary reason for the markedly higher amount of Na+ in the roots of G. inflata than in those of G. uralensis. The tendency of G. inflata to maintain low MDA levels in its roots under such conditions is closely related to the biosynthesis of flavonoids and carotenoids and the maintenance of the osmotic balance in roots by the absorption of more K+ and Ca2+ to meet growth needs. These findings may provide new insights for developing and cultivating G. uralensis plant species selected for cultivation in saline environments or soils managed through agronomic practices that involve the use of water with a high salt content.

Large‐scale breeding population validating significant loci for the 1000‐kernel weight of wheat

AbstractAs an important component of wheat (Triticum aestivum L.) yield, 1000‐kernel weight (TKW) has played a crucial role in yield improvement in recent decades. Marker‐assisted selection is an effective tool for improving quantitative traits; however, most markers have not been effectively applied in TKW improvement despite the identification of many loci associated with TKW. In this study, association mapping was performed using local cultivated varieties, and a previous linkage analysis was integrated to identify 10 candidate intervals. The corresponding kompetitive allele‐specific PCR markers associated with TKW were successfully developed and screened in 1153 F4 breeding lines. Three markers, namely, Ktkw‐5B2, Ktkw‐5D, and Ktkw‐7D, were proved to be significantly related to TKW according to large‐scale association mapping, and their ability to increase TKW was enhanced in combination. We applied the three markers in 150 F6 breeding lines and obtained 25 high‐TKW lines, indicating the availability in marker‐assisted selection. The TKW‐increasing allele for Ktkw‐5D was heavily selected in the present breeding program, while that for Ktkw‐5B2 was low and for Ktkw‐7D tended to increase after 2000. Furthermore, strategies for gene exploration in the three significant intervals were proposed. These results are expected to provide an efficient route for improving TKW in wheat high‐yield breeding.

Bрожайність ранньостиглих сортів картоплі за впливу природно-кліматичних умов західного лісостепу

Agriculture remains a key branch of the economy, ensuring food security and the production of important types of raw materials, but due to the fact that predictive assessments demonstrate the negative impact of climate change on the yield of agricultural crops, there is a need to modernize existing models of agricultural production and improve methods of managing agricultural systems with taking into account climate change. The issues of optimization of obtaining high productivity of potatoes, in certain regions, should first of all be aimed at the rational use of natural and climatic conditions of the year, with the aim of timely revision of the cultivation technology, which would correspond to the most complete realization of the agro-climatic potential of the research area, namely the Western Forest-Steppe. Solving this task depends on the degree of study of the interaction and interdependence of the influence of natural and climatic conditions on the processes of formation of yield and quality of potatoes. The results of the analysis of weather and climate conditions in the Western Forest-Steppe during 2010-2023 and their impact on the yield of early-ripening potato varieties are presented. It was investigated that the meteorological conditions in some years fluctuated sharply in comparison both to previous years and to the average long-term data. This is especially true about the total amount of precipitation and its distribution during the potato growing season, because with regard to the dynamics of the temperature regime, as already noted, a significant increase has been observed. Despite this during the potato growing season the temperature and water conditions provided favorable conditions for obtaining a high yield of early-ripening potato varieties. The presented results of the analysis of weather and climate conditions in the Western Forest-Steppe during 2010-2023 indicate a positive effect on the yield of potato varieties of the early-ripening group. It was established that the weather and climatic conditions of the research area favor the cultivation of potato varieties of the early-ripening group, and the yield compared to the standard variety increased by 0.9-5.2 t/ha. The conducted analysis makes it possible to select the most productive potato varieties of the early-ripening group, which are the most optimal for cultivation in the conditions of the Western Forest-Steppe of Ukraine as well as further study and improvement regarding the formation of their productivity

Reproductive Ability Disparity in the Pacific Whiteleg Shrimp (Penaeus vannamei): Insights from Ovarian Cellular and Molecular Levels.

The Pacific whiteleg shrimp (Penaeus vannamei) is a highly significant species in shrimp aquaculture. In the production of shrimp larvae, noticeable variations in the reproductive capacity among female individuals have been observed. Some females experience slow gonadal development, resulting in the inability to spawn, while others undergo multiple maturations and contribute to the majority of larval supply. Despite numerous studies that have been conducted on the regulatory mechanisms of ovarian development in shrimp, the factors contributing to the differences in reproductive capacity among females remain unclear. To elucidate the underlying mechanisms, this study examined the differences in the ovarian characteristics between high and low reproductive bulks at different maturity stages, focusing on the cellular and molecular levels. Transmission electron microscopy analysis revealed that the abundance of the endoplasmic reticulum, ribosomes, mitochondria, and mitochondrial cristae in oocytes of high reproductive bulk was significantly higher than that of the low reproductive bulk in the early stages of ovarian maturation (stages I and II). As the ovaries progressed to late-stage maturation (stages III and IV), differences in the internal structures of oocytes between females with different reproductive capacities gradually diminished. Transcriptome analysis identified differentially expressed genes (DEGs) related to the mitochondria between two groups, suggesting that energy production processes might play a crucial role in the observed variations in ovary development. The expression levels of the ETS homology factor (EHF) and PRDI-BF1 and RIZ homology domain containing 9 (PRDM9), which were significantly different between the two groups, were compared using qRT-PCR in individuals at different stages of ovarian maturation. The results showed a significantly higher expression of the EHF gene in the ovaries of high reproductive bulk at the II and IV maturity stages compared to the low reproductive bulk, while almost no expression was detected in the eyestalk tissue of the high reproductive bulk. The PRDM9 gene was exclusively expressed in ovarian tissue, with significantly higher expression in the ovaries of the high reproductive bulk at the four maturity stages compared to the low reproductive bulk. Fluorescence in situ hybridization further compared the expression patterns of EHF and PRDM9 in the ovaries of individuals with different fertility levels, with both genes showing stronger positive signals in the high reproductive bulk at the four ovarian stages. These findings not only contribute to our understanding of the regulatory mechanisms involved in shrimp ovarian development, but also provide valuable insights for the cultivation of new varieties aimed at improving shrimp fecundity.

Changes in bioactive compounds and antioxidant activity of Gaziantep and Kastamonu garlic during black garlic production

Garlic (Allium sativum L.), a member of the Alliaceae family, has been widely used in cuisine and traditional medicine since ancient times. Black garlic is produced by fermentation of fresh garlic under controlled conditions for a certain period at high temperature (60-90°C) and high humidity (70-90%). According to the Turkish Statistical Institute (TURKSTAT) data, Kastamonu and Gaziantep garlic varieties are the most cultivated garlic varieties in our country. Changes in protein, sugar content, antioxidant capacity (DPPH and ABTS methods), total phenolic content, 5-hydroxymethylfurfural (HMF) content, and organosulfur compound profiles were investigated in samples taken from Kastamonu and Gaziantep fresh garlic at 7, 14, 21, and 28 days of black garlic production under 65°C temperature and 70% humidity conditions. With these analyses, the differences between black garlic and fresh garlic and the changes in black garlic during the production process were revealed in detail. It was determined that the amount of total phenolic content and antioxidant capacities increased in the black garlic production processes of both regions compared to fresh garlic. While sucrose was fresh garlic’s dominant sugar, fructose was black garlic’s dominant sugar. Among the organosulfur compounds, allicin was dominant in fresh garlic and SAC in black garlic. It was determined that SAC was formed after the enzymatic conversion of ɣ-glutamyl-S-alk(en)yl-L-cysteine and ɣ-glutamyl and the temperature and fermentation time used in black garlic production increased the formation of SAC. The protein content ranging between 5.8%-7.3% in fresh garlic was 13.1-14.2% in black garlic. Fresh and black garlic from the Gaziantep region was determined to have higher total phenolic content, antioxidant capacity, and organosulfur compound contents.

Insights into drought stress response mechanism of tobacco during seed germination by integrated analysis of transcriptome and metabolome

Drought stress inhibits seed germination, plant growth and development of tobacco, and seriously affects the yield and quality of tobacco leaves. However, the molecular mechanism underlying tobacco drought stress response remains largely unknown. In this study, integrated analysis of transcriptome and metabolome was performed on the germinated seeds of a cultivated variety K326 and its EMS mutagenic mutant M28 with great drought tolerance. The result showed that drought stress inhibited seed germination of the both varieties, while the germination rate of M28 was faster than that of K326 under drought stress. Besides, the levels of phytohormone ABA, GA19, and zeatin were increased by drought stress in M28. Five vital pathways were identified through integrated transcriptomic and metabolomic analysis, including zeatin biosynthesis, aspartate and glutamate synthesis, phenylamine metabolism, glutathione metabolism, and phenylpropanoid synthesis. Furthermore, 20 key metabolites in the above pathways were selected for further analysis of gene modular-trait relationship, and then four highly correlated modules were found. Then analysis of gene expression network was carried out of Top30 hub gene of these four modules, and 9 key candidate genes were identified, including HSP70s, XTH16s, APX, PHI-1, 14-3-3, SCP, PPO. In conclusion, our study uncovered some key drought-responsive pathways and genes of tobacco during seeds germination, providing new insights into the regulatory mechanisms of tobacco drought stress response.

Study of potato variety numbers in the breeding process in the northern regions of Russia

In the conditions of the Arkhangelsk region in the nurseries of the breeding process the study of potato hybrids was carried out and the varieties with high yield, resistance to pathogens and various environmental factors were selected. In 2019, 759 hybrid samples of 9 populations were received from the breeding department of the All-Russian Research Institute of Potato Farming by A.G.Lorh with further study and selection of the best of them in the nurseries of the breeding process: hybrids of the 1st and 2nd year, preliminary and main trials of the 1st year. As a result of research and complex evaluation in the nursery of the main trial of the 1st year in the first dynamic digging (60 days after planting) in the group "medium early" hybrid 2553/1 stood out on the total and marketable yield exceeding the standard variety Kholmogorsky by 2.4 times, in the main harvest – only by 11%. In the group "medium early" in the main harvesting hybrid 2553/4 stood out exceeding the standard variety Elizaveta on the total yield by 7.4 t / ha, on marketable – by 3.2 t / ha. High total and marketable potato yields in the main harvest were obtained in sample 2462/3 (44.3 and 42.5 t/ha, respectively). Observations of potato plants during vegetation periods showed that no clone was affected by rhizoctoniose, microsporiosis and viral diseases. High resistance to late blight of potato hybrids in the first observation period and decrease of its resistance to the end of the vegetation period, before removal of haulm, was also revealed. This is probably due to low air temperature and significant precipitation during this period. Selection samples that showed high productivity and resistance to major diseases will be studied in further breeding process in order to create new varieties for cultivation in the conditions of northern regions of Russia.