Waterborne preparation of superhydrophobic coatings now becomes strongly favored because of its environmental and health friendliness. However, the huge surface energy difference between low surface-energy components and water still poses a challenge for achieving their co-dispersion. Here, a surfactant-mediated protection strategy is proposed to achieve well dispersion of both SiO2 nanoparticles and perfluorosilane in water as well as block their conjugation, thereby fabricating a 100% waterborne F-FC-SiO2 suspension with high homogeneity and dispersion stability. During the painting and drying process, demulsification spontaneously triggers the deprotection and enables sufficient covalent conjugation between perfluorosilane and SiO2, thus achieving a superhydrophobic coating. This supramolecular protection/deprotection approach enables high compatibility of the F-FC-SiO2 suspension with versatile waterborne polymer emulsions (e.g., waterborne polyurethane, waterborne polysiloxane, and waterborne epoxy resin) to fabricate durable superhydrophobic coatings. The resulting composite coating can impart super-repellency to various substrates against aqueous solutions and multiple oils, displaying high antifouling and self-cleaning properties, as well as resistance to extreme mechanical abrasion and weathering. This work provides a promising approach for the convenient production of totally waterborne superhydrophobic coatings.