Common Species Research Articles

Determining diagnostic characteristics of the nonmarine Ostracoda (Crustacea) and their habitat selection with unique functional traits in the Kastamonu province (Türkiye)

Nonmarine ostracods are widely distributed in a variety of aquatic habitats, from mountain lakes to underground waters, where each species tends to show species-specific habitat preferences with unique functional traits to increase their survival chances. To understand the patterns of such a relationship between habitat preferences and functional traits of the species, 101 different aquatic sites in the Kastamonu province (Türkiye) were randomly sampled during August 2023. A total of 39 ostracods (20 species, 19 unnamed taxa) were encountered from 49 sites. Seventeen species are new reports for the province. Among them, six species are the most common species with cosmopolitan (or cosmoecious) characteristics. The contribution of these species to the diversity of alpha species (p < 0.05) was more than 90 %. The species with relatively high ecological tolerances generally unveiled low-optimum estimates. Canonical correspondence analysis explained 62.5 % of the correlation between environmental variables and species in which redox potential, electrical conductivity, calcium, and pH were found to be the most related variables to the species (p < 0.05). Fundiversity analysis showed that the presence of swimming setae was correlated with high values of functional diversity, functional richness, and functional distribution of species among five elevation ranges. The results of the habitat selection index and the standardized selection index coincided with the functional traits of the most common species. The species characterized by their habitat selection can be considered as diagnostic species of those specific habitats. Among them, Neglecandona neglecta, reported primarily from dams, springs, and troughs, is considered a typical diagnostic species of these habitats, while Cypridopsis vidua found in lakes and dams can be used as an indicator species for these types of lentic habitats. Similarly, three species (Heterocypris incongruens, Ilyocypris bradyi, Psychrodromus olivaceus) can play a critical role as diagnostic species in troughs but reporting them from different habitats such as ditches and rivers / lakes (I. bradyi) and dams (P. olivaceus and H. salina) indicated their wide range of habitat preferences. Hence, the results suggest that the occurrence of diagnostic species seems to correspond to certain habitat types and their functional traits.

Bringing the Genomic Revolution to Comparative Oncology: Human and Dog Cancers.

Dogs are humanity's oldest friend, the first species we domesticated 20,000-40,000years ago. In this unequaled collaboration, dogs have inadvertently but serendipitously been molded into a potent human cancer model. Unlike many common model species, dogs are raised in the same environment as humans and present with spontaneous tumors with human-like comorbidities, immunocompetency, and heterogeneity. In breast, bladder, blood, and several pediatric cancers, in-depth profiling of dog and human tumors has established the benefits of the dog model. In addition to this clinical and molecular similarity, veterinary studies indicate that domestic dogs have relatively high tumor incidence rates. As a result, there are a plethora of data for analysis, the statistical power of which is bolstered by substantial breed-specific variability. As such, dog tumors provide a unique opportunity to interrogate the molecular factors underpinning cancer and facilitate the modeling of new therapeutic targets. This review discusses the emerging field of comparative oncology, how it complements human and rodent cancer studies, and where challenges remain, given the rapid proliferation of genomic resources. Increasingly, it appears that human's best friend is becoming an irreplaceable component of oncology research.

Decoding the Baltic Sea’s past and present: A simple molecular index for ecosystem assessment

Marginal sea ecosystems, such as the Baltic Sea, are severely affected by anthropogenic pressures, such as climate warming, pollution, and eutrophication, which increased in the course of the past century. Biodiversity monitoring data and assessment of environmental status in such systems have typically been carried out only for the past few decades, if at all, and knowledge on pre-impact stability and good ecological status is limited. An extension of monitoring time series can potentially be achieved through analyses of paleoecological records, e.g. for phytoplankton, which form the base of the food web and are highly susceptible to environmental changes. Within the phytoplankton community, dinoflagellates and diatoms play a significant role as primary producers, and their relative dominance in the spring bloom, calculated as Dia/Dino index, is used as an indicator for the environmental status of the Baltic Sea. To extend time series on the dominance patterns and include non-fossilized dinoflagellates, we here establish a simple droplet digital PCR (ddPCR) reaction on ancient DNA from sediment cores that decodes phytoplankton dynamics. We focus on two common spring bloom species, the diatom Skeletonema marinoi and the dinoflagellate Apocalathium malmogiense, for which we evaluate a DNA based dominance index. It performs very well in comparison to DNA metabarcoding and modern monitoring and can elucidate past species dominance across the past century and across millennia in different basins of the Baltic. For the past century, we see a dominance shift already starting before the mid-20th century in two of the Baltic Sea basins, thus substantially predating current monitoring programs. Shifts are only partly coeval among the cores and the index shows different degrees of stability. This pattern is confirmed across millennia, where a long-term stable relationship between the diatom and the dinoflagellate is observed in the Eastern Gotland Basin, while data from the Gulf of Finland bear testimony to a much more unstable relationship. This confirms that good ecological status based on the dominance pattern of diatoms and dinoflagellates must be established locally and exemplifies how sediment core DNA can be employed to extend monitoring data.

Improving treatment of chromoblastomycosis: the potential of COP1T-HA and antimicrobial photodynamic therapy against Fonsecaea monophora In Vitro

ABSTRACT Fonsecaea monophora is one of the common pathogenic species of Chromoblastomycosis (CBM). Antimicrobial photodynamic therapy (aPDT) shows promise as a new treatment for CBM. In this study, we evaluated the effectiveness of COP1T-HA which is a porous organic cage and aPDT against Fonsecaea spp. in vitro.

Chronic anthropogenic disturbance causes prolific resprouting and dwarfing – A case study of a widely distributed subtropical tree

Chronic anthropogenic disturbance (CAD) comprises the additive effect of multiple anthropogenic stressors that lead to subtle but continuous alterations to the structure, composition and functioning of natural ecosystems. However, this effect has been little studied at the tree species level. Here, we examined CAD effects on Chinese beech (Fagus engleriana), a common species in northern subtropical forests that utilizes both vegetative resprouting and seeding as regenerative modes. We computed an index of CAD for each plot based on livestock grazing intensity, wood extraction and miscellaneous resource use. Over 60 20 × 20 m plots, we measured the height and DBH of a total of 1261 Chinese beech individuals (21.02 ± 13.06 per plot, [mean ± SD]), including 593 adults (9.88 ± 4.89), 576 saplings (9.60 ± 8.91) and 92 seedlings (1.53 ± 3.91), and assessed the proportions of each that exhibited resprouting (0.91 ± 0.11, 0.69 ± 0.29, and 0.09 ± 0.25, respectively). CAD was associated with a greater number of individual trees and a proliferation of stems, and with a greater proportion of resprouting seedlings, but had no effect on adult-sized stem DBH. Chinese beech thus appears generally tolerant of CAD, which may ultimately result in its increasing contribution to the maintenance of forest biomass. CAD was also associated with shorter adult and sapling stems, but taller resprouting seedling stems, implying that CAD induced dwarfism as Chinese beech matures. Further analysis showed that the proportion of resprouting was related to small scale wood extraction and miscellaneous resource use, but not to grazing. In the context of better understanding cryptic effects of CAD, our findings show that CAD can alter tree morphology and regenerative processes. These coppicing-type effects of CAD on tree morphology structure are typically associated with higher community biodiversity in managed forest coppice, and future work should investigate the biodiversity consequences of CAD at our study site. Our study shows that CAD has important implications for forest resource utilization, planning, and management, with effects on forest biomass and carbon storage in human-modified landscapes.

Native root hemiparasites form haustorial attachments with multiple invasive and expansive species

Parasitic plants are known for shaping plant communities, mainly by suppressing dominant species. This suppression, in some cases, fosters species coexistence and boosts overall diversity. Recent studies reveal that certain parasitic plants can curb invasive alien plants or expansive native species. In this study, we followed previous case studies, investigating the ability of three common Central European hemiparasitic species to attach to roots and form functional haustoria across a broad range of invasive and expansive hosts. For each host-hemiparasite pair, we posed two questions: (i) Do the hemiparasites produce haustoria on the host's roots or rhizomes? (ii) Does the anatomical structure of the haustoria include all features necessary for their functionality? We cultivated three hemiparasitic species, Melampyrum arvense L., Rhinanthus alectorolophus (Scop.) Pollich, and Odontites vernus subsp. serotinus (Dumort.) Corb., in pots with 18 candidate hosts. After cultivation, we dissected the root systems to determine haustoria abundance and to collect them for anatomical study to assess their functionality. Hemiparasite individuals in each pot were also counted. The hemiparasitic species produced haustoria on the majority of tested hosts (37 out of 44 combinations), with little difference between native expansive and alien invasive plant species. In 13 host-hemiparasite combinations (including eight combinations with invasive species), we identified abundant functional haustoria and good establishment of the hemiparasites. Remarkably, all three hemiparasitic species formed functional haustoria on invasive Asteraceae hosts. By contrast, Melampyrum arvense performed poorly when cultivated with grasses. We identified a series of hemiparasite-host combinations, which should be further tested for the potential hemiparasite effect on host fitness in the field. The abundance and anatomical structure of the haustoria indicates that the recognised low specificity of the hemiparasitic interactions applies also to associations with alien invasive species, with which they do not share a common evolutionary history.

Viewing Native American Cervical Cancer Disparities through the Lens of the Vaginal Microbiome: A Pilot Study.

Vaginal dysbiosis is implicated in persistent HPV infection and cervical cancer. Yet, there is a paucity of data on the vaginal microbiome in Native American communities. Here, we aimed to elucidate the relationships between microbiome, HPV, sociodemographic and behavioral risk factors to better understand an increased cervical cancer risk in Native American women. In this pilot study, we recruited 31 participants (16 Native American, 15 non-Native women) in Northern Arizona and examined vaginal microbiota composition, HPV status, and immune mediators. We also assessed individuals' sociodemographic information, and physical, mental, sexual, and reproductive health. Overall, microbiota profiles were dominated by common Lactobacillus species (associated with vaginal health) or a mixture of bacterial vaginosis-associated bacteria. Only 44% of Native women exhibited Lactobacillus dominance, compared to 58% of non-Native women. Women with vaginal dysbiosis also had elevated vaginal pH and were more frequently infected with high-risk HPV. Furthermore, we observed associations of multiple people in a household, lower level of education, and high parity with vaginal dysbiosis and abundance of specific bacterial species. Finally, women with dysbiotic microbiota presented with elevated vaginal levels of proinflammatory cytokines. Altogether, these findings indicate an interplay between HPV, vaginal microbiota, and host defense, which may play a role in the cervical cancer disparity among Native American women. Future longitudinal studies are needed to determine the mechanistic role of vaginal microbiota in HPV persistence in the context of social determinants of health toward the long-term goal of reducing health disparities between non-Hispanic White and Native American populations.

Collembola and ants: Influence of trails of red wood ants (Formica lugubris) on the community of soil springtails

Red wood ants are keystone species in forest ecosystems. Because ants are active polyphagous predators, they control the abundance of other arthropods. In addition to direct effects on other species, there are a number of indirect effects caused by ants. In our study, we investigated the influence of ants on springtails, which they rarely come into contact with. Springtails have been set as a model group to assess the state of soil animals, since they are one of the most numerous and widespread groups of soil microarthropods. They are characterized by high sensitivity to environmental changes. The basic characteristics (abundance, species richness, and species diversity) of the springtail community and the response of certain species to the presence of ant trails have been studied. The total abundance and species richness of springtails decreased along ant trails. Among occurred species Parisotoma ParIsotoma notabilis, Lepidacyrtus lignorum, Isotomiella minor, Desoria tigrina, and Pseudasinella alba are the most numerous species both along ant trails and in control samples. There are no significant changes in species diversity (assessed by the Shannon-Weaver index). Species structure of springtail communities along ant trails and in control is different. Two groups of common Collembola species are identified: (1) increasing their numbers in the presence of ants, (2) on the contrary, decreasing. The presence of ants in a forest ecosystem influences the soil springtail community, although ant-Collembola interactions are indirect.

Inhibitory effect of Nigella sativa oil loaded to liposomal nanocarriers on Candida parapsilosis isolates.

Candida parapsilosis is the second most common species causing infectious diseases and can lead to biofilm resistance. This study aims to adjust and synthesize a liposomal compound of Nigella sativa and evaluate its antifungal properties against C. parapsilosis isolates. The liposomal formulation of N. sativa was optimized through the utilization of transmission electron microscopy (TEM), particle size analysis, zeta potential measurement, and UV-visible spectrophotometry. Furthermore, an MTT (3-[4,5-dimethylthiazol-2-yl]-2,5 diphenyl tetrazolium bromide) assay was conducted on peripheral blood mononuclear cells (PBMCs). The antifungal efficacy was evaluated in accordance with the M27-A3 guideline. The minimum inhibitory concentrations (MICs) of N. sativa oil and the liposomal formulation on C. parapsilosis isolates ranged from 128 to 8 µg/mL and from 250 to 31.25 µg/mL, respectively. The MIC50 and MIC90 values of N. sativa oil and the liposomal formulation were 125, 187, and 32, 96 µg/mL, respectively. The viability percentage of cells treated with the liposomal formulation and free N. sativa oil was 91% and 85%, respectively. The cytotoxicity of free N. sativa was significantly reduced when using nanoliposomes. The liposomal form of N. sativa showed greater antifungal properties compared to the free N. sativa extract against C. parapsilosis isolates.

Capillaria hepatica (syn. Calodium hepaticum) infection and factors influencing infection carriage in rats (Rattus spp.) in Hong Kong

Capillaria hepatica (syn. Calodium hepaticum) (Bancroft, 1893) is a nematode, which colonises the liver of a wide range of hosts including humans. The worldwide prevalence of infection in the genus Rattus can be as high as 100% and the Norway rat (R. norvegicus) and black rat (R. rattus) are considered the main host species. This study is the first to investigate the epidemiology of C. hepatica infection in wild rats trapped in various geographical locations in Hong Kong. Four species of trapped rats were identified, with 65% being R. norvegicus, followed by 30% R. tanezumi (Asian house rat), 4% R. andamanensis (Sikkim rat), and 1% Niviventer huang (South China white-bellied rat). The overall prevalence of C. hepatica infection was 36.7% (81/221) (95% CI 30.4–43.4) and R. norvegicus was the most common rat species trapped during this study, with the highest prevalence of C. hepatica infection. Two risk factors for host infection were skin wounds and geographical region, whilst sex, body weight, stage of development, and presence of ectoparasites were not risk factors for this infection. Gross hepatic lesions were absent in 17% of infected rats and when present, were not pathognomonic for the infection. Infected rats lacked severe hepatic inflammation or fibrosis, indicating that rats tolerate the infection well. Egg production was observed in the livers of 69% of infected rats, which emphasizes their role as reservoirs of this zoonotic parasite. Several infected rats in this study were trapped inside residential buildings, which highlights the zoonotic risk of C. hepatica to humans following the potential ingestion of embryonated eggs from contaminated food, water, or soil.

Analysis of Market System Mapping Patterns and Potential for Milkfish Cultivation in Pangkahwetan Village, Gresik Indonesia

One of the common species for aquaculture in Indonesia is milkfish (Chanos chanos). Pangkah Wetan Village in Gresik Regency is one of the areas that have the potential or value for milkfish aquaculture, which is influenced by the majority of the population who have a livelihood in the fisheries sector and milkfish is relatively easy to cultivate due to its fast growth. This research examines the potential of milkfish, the milkfish market system, and the strategy for developing milkfish cultivation through an analysis of the market system approach. The analysis is carried out to identify the various barriers that exist in the market system and to place the focus on how to overcome these obstacles. It was discovered that the cause of the low productivity of milkfish aquaculture was due to limitations in supporting services, not in the actors. The basic causes of this productivity include various seedlings' quality, limited artificial feed, low utilization of technology, low access to capital, low marketing levels, and the minimal role of related institutions. Hence, systemic intervention is necessary in terms of support services in order to improve the welfare of the community which in turn will increase the income of farmers

A Novel Meta-Heuristic Algorithm Based on Birch Succession in the Optimization of an Electric Drive with a Flexible Shaft

The paper presents the application of a new bio-inspired metaheuristic optimization algorithm. The popularity and usability of different swarm-based metaheuristic algorithms are undeniable. The majority of known algorithms mimic the hunting behavior of animals. However, the current approach does not satisfy the full bio-diversity inspiration among different organisms. Thus, the Birch-inspired Optimization Algorithm (BiOA) is proposed as a powerful and efficient tool based on the pioneering behavior of one of the most common tree species. Birch trees are known for their superiority over other species in overgrowing and spreading across unrestricted terrains. The proposed two-step algorithm reproduces both the seed transport and plant development. A detailed description and the mathematical model of the algorithm are given. The discussion and examination of the influence of the parameters on efficiency are also provided in detail. In order to demonstrate the effectiveness of the proposed algorithm, its application to selecting the parameters of the control structure of a drive system with an elastic connection is shown. A structure with a PI controller and two additional feedbacks on the torque and speed difference between the drive motor and the working machine was selected. A system with rated and variable parameters is considered. The theoretical considerations and the simulation study were verified on a laboratory stand.

DNA Barcoding Unveils Novel Discoveries in Authenticating High-Value Snow Lotus Seed Food Products.

Snow Lotus Seed (SLS), esteemed for its nutritional and market value, faces challenges of authentication due to the absence of appropriate testing standards and methods. This results in frequent adulteration of SLS sourced from Gleditsia sinensis (G. sinensis) with other plant seeds endosperm. Traditional chloroplast DNA barcoding methods are inadequate for species identification due to the absence of chloroplasts in G. sinensis seeds endosperm. In this study, the homology of 11 ITS genes among 6 common Gleditsia species was analyzed. Universal primers suitable for these species were designed and screened. A DNA barcoding method for distinguishing SLS species was developed using Sanger sequencing technology, leveraging existing GenBank and Barcode of Life Data System (BOLD) databases. Optimized sample pretreatment facilitated effective DNA extraction from phytopolysaccharide-rich SLS. Through testing of commercial SLS products, the species origin has been successfully identified. Additionally, a novel instance of food fraud was uncovered, where the Caesalpinia spinosa endosperm was used to counterfeit SLS for the first time. The study established that the developed DNA barcoding method is effective for authenticating SLS species. It is of great significance for combating food fraud related to SLS, ensuring food safety, and promoting the healthy development of the SLS industry.

Water-Soluble Photoluminescent Ag Nanoclusters Stabilized by Amphiphilic Copolymers as Nanoprobe for Hypochlorite Detection

Luminescent Ag nanoclusters (Ag NCs) are a promising probe material for sensing and bioimaging applications. However, the intrinsic obstacle of poor water stability and photostability greatly restrict their practical application in biological systems. Herein, we report the intracellular hypochlorite (ClO−) detection with amphiphilic copolymer-modified luminescent Ag NCs with good biocompatibility and photostability. The Ag NCs were synthesized by using chemically inert hydrophobic ligands and then modified with an amphiphilic (1,2-distearoyl-sn-glycero-3-phosphoethanolamine-N-[methoxy(poly(ethylene glycol))-2000]) (DSPE-PEG-2000) and sodium dodecyl sulfonate (SDS) for phase transfer. It was found that the approach of the removal of organic solvents during the phase transfer has remarkable influences on the properties of the Ag NCs, including their size, luminescence property, and aqueous stability. Furthermore, the silver core of Ag NCs could be oxidatively damaged by ClO−, thereby causing photoluminescence (PL) quenching. The ClO−-induced PL quenching was specific over the other common reactive oxygen species (ROS) as well as some common interferences. Finally, they have been successfully applied as a fluorescent nanoprobe for detecting exogenous and endogenous ClO− in living cells.

Beyond the Surface: Decoding Pityriasis Versicolor Through Clinical, Dermoscopic and Microbiological Exploration

Abstract Background: Pityriasis versicolor (PV) is an asymptomatic, superficial fungal infection caused by the Malassezia species and causes discolouration of the skin leading to altered pigmentation. It is usually a clinical diagnosis, but in doubtful cases wherein potassium hydroxide (KOH) mount is unavailable, alternative modalities like dermoscopy aid in the management. Aims and Objectives: To evaluate the clinical and dermoscopic patterns in PV and correlate with the associated risk factors and study the fungal culture. Materials and Methods: A cross-sectional observational study was conducted for 12 months. A total of 115 patients clinically diagnosed with PV showing positivity on KOH mount were recruited. Dermoscopy was done, following which the scales were scraped and cultured in the laboratory on Saborauds dextrose agar and modified Dixon media, and the results were analysed after 3 weeks. Results: Among the 115 participants, on clinical evaluation, 79 patients had achromic and 36 patients had chromic lesions. The dermoscopic features were categorized into domains such as scaling, pigmentation and other features. Fine scaling was the most common feature observed in 88.7% of the patients. Pigmentary changes were noted in all the patients with non-uniform pigmentation being the most common. We have also observed and described newer dermoscopic findings such as barbed wire fence appearance of ridges and furrows, fluffy cotton ball appearance of hypopigmented perifollicular lesions and sprinkled pepper appearance of pigmented dispersion. Out of the 115 KOH mount positive cases, 51 (44.3%) showed growth on fungal culture with Malassezia furfur being the most common species to be isolated in 18 patients. Conclusions: Dermoscopy is a new, popular non-invasive diagnostic modality, which shows specific features like fine scaling, pigment alteration, ridges and furrows with perifollicular involvement, and can be used to diagnose doubtful cases of PV as an adjunct or substitute to a KOH mount.

Comparative analysis of whole chloroplast genomes of three common species of Nekemias from vine tea

Nekemias grossedentata (N. grossedentata) is a medicinal and edible plant. The young leaves and tender stems are specifically utilized to manufacture vine tea, which is traditionally employed in the treatment of conditions such as the common cold fever, sore throat, jaundice hepatitis, and other ailments. The morphologically of N. grossedentata similar to Nekemias cantoniensis (N. cantoniensis) and Nekemias megalophylla (N. megalophylla), which lead to a chaotic market supply. Numerious studies have confirmed that chloroplast genomes and chromatography play important role in plant classification. Here, the whole chloroplast (cp) genomes of the three Nekemias species were sequenced in Illumina sequencing platform. Meanwhile, their chromatographic fingerprints have constructed using high-performance liquid chromatography (HPLC). The annotation results demonstrated that the three chloroplast genomes were typical quadripartite structures, with lengths of 162,147 bp (N. grossedentata), 161,981 bp (N. megalophylla), and 162,500 bp (N. cantoniensis), respectively. A total of 89 (N. grossedentata) /86 (N. megalophylla and N. cantoniensis) protein-coding genes, 37 tRNA gene and 8 rRNA genes were annotated. The IR/SC boundary regions were relatively conserved across the three species, although three regions (rps19-rpl2, rpl32-trnL-UAG, ccsA-ndhD) exhibited nucleotide diversity values (Pi) of variable sites higher than 1%. Phylogenetic analysis indicated that N. grossedentata had a closer genetic relationship with N. megalophylla than that of N. cantoniensis. Moreover, the chromatographic fingerprints revealed that the main functional components and genetic relatedness of three species were highly similar with their morphological results. In conclusion, N. grossedentata and N. megalophylla can be consider as the origin plants of vine tea. This study provides appropriate information for species identification, phylogeny, quality assessment of three medicinal plants of the genus Nekemias and will contribute to the standardization of vine tea raw materials.

New Insights Concerning Phytophotodermatitis Induced by Phototoxic Plants.

The present review explores the underlying mechanisms of phytophotodermatitis, a non-immunologic skin reaction triggered by certain plants followed by exposure to ultraviolet radiation emitted by sunlight. Recent research has advanced our understanding of the pathophysiology of phytophotodermatitis, highlighting the interaction between plant-derived photosensitizing compounds (e.g., furanocoumarins and psoralens) and ultraviolet light leading to skin damage (e.g., erythema, fluid blisters, edema, and hyperpigmentation), identifying these compounds as key contributors to the phototoxic reactions causing phytophotodermatitis. Progress in understanding the molecular pathways involved in the skin's response to these compounds has opened avenues for identifying potential therapeutic targets suitable for the management and prevention of this condition. The review emphasizes the importance of identifying the most common phototoxic plant families (e.g., Apiaceae, Rutaceae, and Moraceae) and plant species (e.g., Heracleum mantegazzianum, Ruta graveolens, Ficus carica, and Pastinaca sativa), as well as the specific phytochemical compounds responsible for inducing phytophototoxicity (e.g., limes containing furocoumarin have been linked to lime-induced photodermatitis), underscoring the significance of recognizing the dangerous plant sources. Moreover, the most used approaches and tests for accurate diagnosis such as patch testing, Wood's lamp examination, or skin biopsy are presented. Additionally, preventive measures such as adequate clothing (e.g., long-sleeved garments and gloves) and treatment strategies based on the current knowledge of phytophotodermatitis including topical and systemic therapies are discussed. Overall, the review consolidates recent findings in the field, covering a diverse array of phototoxic compounds in plants, the mechanisms by which they trigger skin reactions, and the implications for clinical management. By synthesizing these insights, we provide a comprehensive understanding of phytophotodermatitis, providing valuable information for both healthcare professionals and researchers working to address this condition.

Biodiversity Assessment of a Mississippi River Backwater Complex Using eDNA Metabarcoding

The backwater lowland habitats of large rivers, like the Mississippi River in North America, present complex and often inaccessible environments for traditional capture-based fish biodiversity sampling. Our knowledge of the assemblages of the fishes that occupy such habitats is often incomplete, and this can compromise management efforts. We employed environmental DNA (eDNA) metabarcoding methods to sample a Mississippi River bottom wetland system to assess the ichthyofaunal diversity and the assemblage structure across habitat types, and we compared our results with capture-based survey records for the same habitats. We collected water samples in the spring and fall of 2022 from slough, ditch, shallow lake, and bayou habitats that varied in depth, vegetation, seasonal variability, and connectivity to the Mississippi River channel. We detected a diverse array of fish species that included 51 taxa. Nearly all the species previously documented in the habitats were detected using eDNA metabarcoding, and we increased the number of documented species by more than a third. Most of the species were ubiquitous across the range of habitats, but there was also a substantial assemblage structure, with some species exhibiting clear habitat specificity. Fall sampling was limited to the deeper bayou habitats where seasonal variation between the spring and fall was minimal. eDNA metabarcode sampling was demonstrated to be effective at detecting invasive species as well as uncommon species, which included several species of conservation concern.

Abundance and diversity of macro-invertebrates in the selected mangrove species along the coast of Mbegani in Bagamoyo District, Tanzania

BackgroundMangrove forests are highly productive ecosystems that serve as biodiversity points, containing many organisations, contributing to carbon storage, improving water quality and providing ecosystem goods and services to improve local means of subsistence. These resilient ecosystems are characterised by their morphological modification and their particular respiratory structures (pneumatophores), which allow them to proliferate in salt-rich environments. Mangroves play a crucial role in maintaining invertebrate and fishery resources, providing shelter and nutrients to a diverse range of species. However, mangrove ecosystems are threatened by anthropogenic activities such as the extraction of building materials, firewood, crushing plants and salt manufacturing, resulting in the disintegration of ecosystems and the loss of inhabitants. This study aimed to determine the abundance and diversity of macro-benthic invertebrates on the different parts (roots, stems and leaves) of common mangrove species of the Mbegani coast, along the Indian Ocean using a completely randomised design.ResultsThe sampling was done using a 1 m2 quadrat focussed on the three mangrove parts, viz. roots, stems and leaves. The results showed that the highest percentage of macro-invertebrates were recorded on Bruguera gymnorhiza (66.8%), followed by Avicennia marina (20.8%) and the least were Ceriops tagal (12.4%), such variation differed significantly between the three mangrove species across the selected plots (F(2,524) = 5.71, p = 0.035). The stems (54.4%) inhabited a large number of macro-invertebrates, followed by roots (32.8%) and the least were leaves (12.8%), which varied significantly between the three mangrove parts sampled across the selected mangrove species (F(2,524) = 7.25; p = 0.008). The majority of macro-invertebrates were planktonic feeders stuck on stems or herbivores shuttling between the roots and leaves of the plants. Macro-invertebrates recorded on Bruguiera gymnorhiza were more diverse than those found in C. tagal. The findings emphasise the importance of macro-invertebrates in the ecological balance of mangrove ecosystems.ConclusionThe study concludes that mangroves in the Mbegani ecosystem have a high potential for biodiversity and are important for the coastal community and the ecosystem of the Bagamoyo District. The results contribute to coastal resources management programmes and future surveillance activities.

Influence of hydrological variability and life history strategy on riverine fish assemblages in the Australian wet‐dry tropics

AbstractRiverine fish assemblages are strongly influenced by attributes of the flow regime. Tropical savannah river systems have distinct and predictable hydrologic seasonality, reflecting the wet‐dry climate, but can vary substantially in terms of dry season flow permanency and wet season flow‐pulse characteristics. Understanding how flow permanence and variability influence fish assemblages, and whether these factors can be used to predict responses to future hydrological change, are key knowledge gaps that impede effective management. We examined the influence of hydrological variability on the structure and diversity of freshwater fish assemblages across rivers of the wet‐dry tropics of northern Australia. We found distinct fish assemblages that varied predictably across three hydrological river types: Intermittent, Perennial Stable and Perennial Flashy flow regimes. This distinction emerged despite a common species pool across the region. Species richness was greatest in rivers with Perennial Stable flow regimes, whereas beta‐diversity was greatest in Intermittent rivers. However, life history strategies of constituent species were generally poor predictors of species abundances within each hydrological river type. The distinct fish assemblages evident among hydrological classes may provide some cautious ability to both predict potential fish assemblage changes with future hydrological changes (e.g. if perennial streams became more flashy or intermittent), and to predict fish assemblages expected in unsampled rivers with particular hydrological characteristics. Our findings provide further support for the importance of maintaining regional flow‐habitat heterogeneity and the connectivity between hydrological river types, and their essential role for conserving tropical fish species diversity into an uncertain hydrological future.