Color Development Research Articles

Integrative Metabolome and Transcriptome Analyses Reveal the Pericarp Coloration Mechanisms in Bitter Melon (Momordica charantia L.)

Pericarp colors are critical agronomic traits that affect the quality and economic values of fruits. Although a diversity of bitter melon pericarp (BMP) colors is available, the fruit pigmentation mechanisms remain elusive. Hence, this study aimed to unveil the key metabolites and molecular mechanisms underlying variation in BMP coloration through integrative metabolomics and transcriptomics analyses of four differently colored genotypes, including K1102 (grayish orange), 262 (grayish yellow), 1392 (very soft green), and K115 (dark grayish cyan). The four BMPs exhibited significant metabolite profile and transcriptional differences, as over 112 and 1865 DAMs (differentially accumulated metabolites) and DEGs (differentially expressed genes), respectively, were identified. The variation in the content of six anthocyanins, including malvidin 3-O-glucoside, petunidin 3-O-glucoside, rosinidin O-hexoside, cyanidin, cyanidin 3-p-hydroxybenzoylsophoroside-5-glucoside, and pelargonidin 3-O-beta-D-glucoside, might be the major driving factor of BMP color changes. Notably, malvidin 3-O-glucoside, rosinidin O-hexoside, and petunidin 3-O-glucoside are the dominant pigments in K115, while carotenoids and other flavonoids may contribute to other colors. Candidate flavonoid structural and regulatory (MYBs, NACs, MADSs, bHLHs, and bZIPs) genes were identified. Of them, gene13201 (anthocyanin reductase), gene8173 (polyphenol oxidase), gene2136 (NAC43), gene19593 (NAC104), and gene15171 (tetrapyrrole-binding protein) might play essential roles in K115 pericarp color development. Our findings deepen our understanding of BMP pigmentation and provide fundamental resources for higher-valued bitter melon breeding perspectives.

Discoloration performance and mechanism research of a novel thermochromic energy storage material

The combination of phase change materials and thermochromic materials can realize the purpose of changing color while storing energy, so as to play the role of temperature regulation and color warning. In this paper, a thermochromic energy storage material (TESM) was prepared by using crystal violet lactone (CVL) and cresol red (CSR) as color former and color developer each other, taking octadecanol (OD) as the solvent and the energy storage material. The phase transition of OD induces ring-opened and ring-closed of lactone in both CVL and CSR, further leading to better discoloration. The influence of different proportions on the discoloration effect was studied. The thermal properties and functional groups of the samples were characterized by differential scanning calorimetry (DSC), thermogravimetric analysis (TG) and Fourier transform infrared spectrometer (FT-IR). The discoloration and re-coloration mechanism were explored. The results showed that the color of the prepared TESM can reversibly change between yellow-green (at room temperature) and red (at high temperature). The discoloration is attributed to the change of the intermolecular force between OD and CSR caused by the solid-liquid phase transformation of OD. When m(CVL): m(CSR): m(OD) = 3:1:500 (B3), the color difference of the prepared TESM is 38.81 NBS and the melting enthalpy is 219.8 J/g. Moreover, the prepared TESM shows good thermal stability and thermal cycling performance, and it has broad application prospects in the field of temperature alert and control.

The Effects of Pre-Harvest Melatonin Applications on Phytochemical Properties of Crimson Seedless Grape Variety (V. vinifera L.)

Foliar melatonin applications are crucial for grape quality as they can enhance skin color development, increase antioxidant capacity and nutritional value of grapes. The effectiveness of preharvest melatonin applications may change depending on fruit species, variety, application time, and dose. In the current study, it was utilized from various doses of melatonin application, including 0, 0.25, 0.50, and 1 mmol l-1 for improving the phytochemical attributes of Crimson Seedless table grape variety. The results of the principal component analysis showed that different doses of foliar melatonin application had different effects on the yield and biochemical attributes of grape variety. But particularly, 1 mmol l-1 and 0.50 mmol l-1 of melatonin doses had significant effects on total phenolic compounds content and antioxidant capacity from the phytochemical properties of Crimson Seedless table grape variety.

Cytological, Physiological, and Transcriptomic Analyses of the Leaf Color Mutant Yellow Leaf 20 (yl20) in Eggplant (Solanum melongena L.)

Leaf color mutants are ideal materials for studying chlorophyll metabolism, chloroplast development, and photosynthesis in plants. We discovered a novel eggplant (Solanum melongena L.) mutant yl20 (yellow leaf 20) that exhibits yellow leaves. In this study, we compared the leaves of the mutant yl20 and wild type (WT) plants for cytological, physiological, and transcriptomic analyses. The results showed that the mutant yl20 exhibits abnormal chloroplast ultrastructure, reduced chlorophyll and carotenoid contents, and lower photosynthetic efficiency compared to the WT. Transcriptome data indicated 3267 and 478 differentially expressed genes (DEGs) between WT and yl20 lines in the cotyledon and euphylla stages, respectively, where most DEGs were downregulated in the yl20. Gene Ontology (GO) analysis revealed the “plastid-encoded plastid RNA polymerase complex” and the “chloroplast-related” terms were significantly enriched. Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis demonstrated that the significantly enriched DEGs were involved in flavone and flavonol biosynthesis, porphyrin and chlorophyll metabolism, etc. We speculated that these DEGs involved in significant terms were closely related to the leaf color development of the mutant yl20. Our results provide a possible explanation for the altered phenotype of leaf color mutants in eggplant and lay a theoretical foundation for plant breeding.

One-step detection of glutathione based on MnO2 nanosheet and pregnancy test strip

Low cost and rapid detection of glutathione (GSH) has important clinical reference value for the diagnosis and treatment of related diseases. In this study, a one-step method for rapid detection of GSH is developed based on the characteristics of low cost, simple operation and rapid color development of pregnancy test strip. In this method, magnetic Fe3O4-doped MnO2 nanosheet is first synthesized, and colloidal gold probe modified with hCG and ssDNA is absorbed on the surface of the nanosheet. Based on the oxidase-like properties of MnO2 nanosheet, in the presence of GSH, a redox reaction between GSH with MnO2 occurs to release hCG signal probe into the solution. The supernatant solution is loaded on pregnancy test strip after magnetic separation, and the test line develops color. Then the smartphone App developed in our lab is used to quantitatively detect GSH. The results show that under the optimal conditions, the GSH in the range of 40–800 μM has a good linear relationship with the color intensity of the test line on pregnancy test strip and the detection limit for GSH is 40 μM. So, this method can realize the detection of GSH with low cost, simple, rapid and sensitive, and it can meet the requirements of GSH detection in actual samples.

Visual detection of biogenic monoamines based on amine oxidase-peroxidase coupling reaction using ascorbic acid as H2O2 scavenger.

This study represents a visual detection for total biogenic monoamines with naked eye as a simple and rapid semi-quantitative method for biogenic amine monitoring. The equivalent reaction of H2O2 with ascorbic acid resulted in color development by an amine oxidase-peroxidase coupling reaction in the samples containing the biogenic monoamines higher than the subjected ascorbic acid by 10μM. Upon employing the commercial doenjang extracts as a model food, an additional heating step was requested, and the expected ranges for the biogenic monoamines from 360 to 480μM covered the real contents of the samples (360.2-407.3μM). Therefore, this visual detection method makes it possible to decide with naked eye whether the sample contains the biogenic monoamines higher than the ascorbic acid supplemented as much as a control level on manufacturing sites without instrumental analysis.

Electrochromic Passive Matrix Display Utilizing Diode‐Like Redox Reactions on Indium‐Tin‐Oxide

Recent years have shown many advances in the development of tunable structural colors by combining nanostructures with electrochromic materials. One main goal is to develop energy saving color displays that rely on ambient light instead of being emissive. However, all displays need to be pixelated to show arbitrary images and few studies have addressed the challenge of preparing and controlling individual electrochromic pixels. Herein, a very simple method to reach this milestone by using passive matrix addressing is presented, which requires no additional electronic components in the pixels. It is shown that the common transparent conductor indium tin oxide (ITO) in non‐aqueous electrolytes exhibits the diode‐like behavior (threshold in voltage in relation to current and coloration) necessary to prevent significant cross‐talk between pixels. The chemical nature of the redox activity that enables this behavior is attributed to omnipresent oxygen and the formation of superoxide ions. Additionally, it is shown that a gel‐like electrolyte can be prepared by optical lithography, which makes the concept compatible with patterning of pixels at high resolution. This method for preparing pixelated displays should be compatible with practically any type of electrochromic surface in both reflective and transmissive configurations. Also, the counter electrode maintains excellent transparency since it simply consists of ITO. The results should prove very useful as the research field of tunable structural colors moves from proof‐of‐concept to real devices.

The Influences of Contemporary Fashion to the Development of Men’s Baju Melayu in Malaysia

This study aims to analyse contemporary fashion influences that occurred in Malay men's Baju Melayu. Observations of modern contemporary Baju Melayu visual images from local designers were performed to identify the development of form, silhouette, colour, styling, and accessories. Analysis showed that the Malay men's Baju Melayu faces many changes in forms, silhouettes, colours, styles, and accessories in line with technological evolution, fashion openness, and the new lifestyle of the Malay men in Malaysia. The study hopes that local designers' new contemporary approaches can still portray Malay identity and sustain it over time.

DNA nanoflowers encapsulating horseradish peroxidase as a signal amplification tag for rapid diagnosis in cytology specimens

Rapid analysis of cytology samples obtained by minimally invasive sampling is essential in clinical diagnosis, yet existing diagnostic methods are often cumbersome and time-consuming. To rapidly detect the scanty number of cells in specimens, a multifunctional detection probe based on DNA nanoflower structure was prepared in this study, which possesses both signal output capability of fluorescence and oxidation reaction (colorimetric assay) for ultra-sensitive cancer cell detection. Firstly, DNA nanoflowers encapsulating horseradish peroxidase (HRP-DNA Nanoflowers, HDFs) were prepared by the rolling circle amplification (RCA) reaction and then hybridized with the aptamers labeled with fluorophores to construct the multivalent aptamer HDFs (Multi-Aptamer-HDFs) with fluorescence effect and efficient cancer cell targeting. The Multi-Aptamer-HDFs probe can be used to detect fresh clinical cytology specimens directly for fluorescence observation with sensitivity and specificity of 88.64%, and 84.85%, respectively. In addition, Multi-Aptamer-HDFs has peroxidase activity due to the encapsulation of HRP, which can catalyze the oxidation of substrates such as ABTS and DAB for color development. Therefore, we applied Multi-Aptamer-HDFs to one-step staining of clinical cytology cell blocks with a sensitivity of 88.41% and a specificity of 83.33%, which required fewer steps and reagents with a significantly shorter time required for immunocytochemical staining. The multifunctional probe, Multi-Aptamer-HDFs, prepared in this study is expected to be better applied in the rapid cellular analyses and one-step immunostaining, which is expected to provide a new means for rapid on-site assessment and on-site preliminary diagnosis.

Analysis on metabolic functions of rhizosphere microbial communities of Pinus massoniana provenances with different carbon storage by Biolog Eco microplates.

Rhizosphere microorganisms are influenced by vegetation. Meanwhile, they respond to vegetation through their own changes, developing an interactive feedback system between microorganisms and vegetation. However, it is still unclear whether the functional diversity of rhizosphere soil microorganisms varies with different carbon storage levels and what factors affect the functional diversity of rhizosphere soil microorganisms. In this study, the Biolog-Eco microplate technique was used to analyze the metabolic diversity of carbon source of rhizosphere soil microorganisms from 6 Pinus massoniana provenances with three levels of high, medium and low carbon storage. The results showed that the average well color development(AWCD) value of rhizosphere microorganisms was significantly positive correlated with carbon storage level of Pinus massoniana (p < 0.05). The AWCD value, Simpson and Shannon diversity of high carbon sequestrance provenances were 1.40 (144h incubation) 0.96 and 3.24, respectively, which were significantly higher (p < 0.05) than those of other P. massoniana provenances. The rhizosphere microbial AWCD, Shannon and Simpson diversity of the 6 provenances showed the same variation trend (SM>AY>QJ>SX>HF>SW). Similarly, microbial biomass carbon (MBC) content was positively correlated with carbon storage level, and there were significant differences among high, medium and low carbon storage provenances. The PCA results showed that the differences in the carbon source metabolism of rhizosphere microorganisms were mainly reflected in the utilization of amino acids, carboxylic acids and carbohydrates. Pearson correlation analysis showed that soil organic carbon (SOC), total nitrogen (TN) and pH were significantly correlated with rhizosphere AWCD (p < 0.05). Soil properties are important factors affecting rhizosphere microbial carbon source metabolism. The study confirmed that the microorganisms of high carbon storage provenances had relatively high carbon metabolic activity. Among them, the carbon metabolic activity of rhizosphere microorganisms of SM provenance was the highest, which was the preferred provenances in effective ecological service function.

Impact of Shade Nets on Tomato Output and Quality in Temperate Region of Kashmir Valley

A field trial was conducted at Sher-e-Kashmir University of Agricultural Sciences and Technology, Kashmir, Shalimar Campus during 2020-21 to ascertain the impact of shade nets on tomato output and quality inside the protected structure. During the study, it was found that no significant difference was observed in average monthly temperature and relative humidity inside polyhouse with shade net and without shade net. Significant difference was recorded in yield and the light intensity. Highest average plant yield of (15.5 kg/plant) was found in polyhouse in which the plants were covered with shade net and lowest yield was observed (13 kg/plant) where plants were not covered with shade net inside the polyhouse during afternoon day time. It was also found that the tomatoes that were grown in shade nets showed good colour development and a glossy appearance as compared to plants grown under protected structures without shade net. No significant difference was observed in quality attributes viz. TSS, acidity and ascorbic acid by shade net. However, the higher TSS (7.1 oBrix), Acidity (0.77%) and Ascorbic acid (45.86 mg/100gm) was recorded in polyhouse without shade net as compared to polyhouse with shade net (6.7, 0.51 and 38.52) respectively. Thus, use of shade net brought improvement in yield and no significant improvement was observed in quality of tomato grown in temperate region of Kashmir valley. Also, the shade net application during winter duration of 2021-22 during evening/night hours led to increase in the temperature inside polyhouse.

Genomic and transcriptomic studies on flavonoid biosynthesis in Lagerstroemia indica

BackgroundLagerstroemia indica is a widely cultivated ornamental woody shrub/tree of the family Lythraceae that is used as a traditional medicinal plant in East Asia and Egypt. However, unlike other ornamental woody plants, its genome is not well-investigated, which hindered the discovery of the key genes that regulate important traits and the synthesis of bioactive compounds.ResultsIn this study, the genomic sequences of L. indica were determined using several next-generation sequencing technologies. Altogether, 324.01 Mb sequences were assembled and 98.21% (318.21 Mb) of them were placed in 24 pseudo-chromosomes. The heterozygosity, repeated sequences, and GC residues occupied 1.65%, 29.17%, and 38.64% of the genome, respectively. In addition, 28,811 protein-coding gene models, 327 miRNAs, 552 tRNAs, 214 rRNAs, and 607 snRNAs were identified. The intra- and interspecies synteny and Ks analysis revealed that L. indica exhibits a hexaploidy. The co-expression profiles of the genes involved in the phenylpropanoid (PA) and flavonoid/anthocyanin (ABGs) pathways with the R2R3 MYB genes (137 members) showed that ten R2R3 MYB genes positively regulate flavonoid/anthocyanin biosynthesis. The colors of flowers with white, purple (PB), and deep purplish pink (DPB) petals were found to be determined by the levels of delphinidin-based (Dp) derivatives. However, the substrate specificities of LiDFR and LiOMT probably resulted in the different compositions of flavonoid/anthocyanin. In L. indica, two LiTTG1s (LiTTG1-1 and LiTTG1-2) were found to be the homologs of AtTTG1 (WD40). LiTTG1-1 was found to repress anthocyanin biosynthesis using the tobacco transient transfection assay.ConclusionsThis study showed that the ancestor L. indica experienced genome triplication approximately 38.5 million years ago and that LiTTG1-1 represses anthocyanin biosynthesis. Furthermore, several genes such as LiDFR, LiOMTs, and R2R3 LiMYBs are related to anthocyanin biosynthesis. Further studies are required to clarify the mechanisms and alleles responsible for flower color development.

Novel chromatic reaction based on the redox reaction between tertiary aromatic amines and gold(Ⅲ) or cerium(Ⅳ)

Abstract Herein, a novel chromatic reaction based on the oxidative self-coupling of tertiary aromatic amines and driven by a redox reaction with gold(III) or cerium(IV) is developed. The dimers resulting from the oxidation of tertiary aromatic amines with gold(III) or cerium(IV) show colors depending on their chemical structures. Substituting a hydrogen atom on the aromatic ring with a methyl or methoxy group induces a bathochromic shift in the color developed via oxidation. This redox reaction is highly selective for gold(III) and cerium(IV) because of their high redox potentials and complexation abilities with tertiary aromatic amines, thus suggesting the development of a selective analytical method for gold(III) and cerium(IV). Cyclic voltammograms and ultraviolet–visible light absorption spectra confirm that the oxidative coupling of tertiary aromatic amines develops color. The addition of reductants, such as l-ascorbic acid, degrades the color of the resultant colored species, thus indicating that the quinoid structure of the colored species caused color development. Thus, the developed redox reaction of tertiary aromatic amines with gold(III) or cerium(IV) provides a new chromogenic platform for determining gold(III), cerium(IV), and ascorbic acid.

Metabolome and Transcriptome Reveal Chlorophyll, Carotenoid, and Anthocyanin Jointly Regulate the Color Formation of Triadica sebifera.

The Chinese tallow tree (Triadica sebifera) is an economically important plant on account of its ornamental value and oil-producing seeds. Leaf colour is a key characteristic of T. sebifera, with yellow-, red- and purple-leaved varieties providing visually impressive displays during autumn. In this study, we performed metabolomic and transcriptomic analyses to gain a better understanding of the mechanisms underlying leaf colour development in purple-leaved T. sebifera at three stages during the autumnal colour transition, namely, green, hemi-purple, and purple leaves. We accordingly detected 370 flavonoid metabolites and 10 anthocyanins, among the latter of which, cyanidin-3-xyloside and peonidin-3-O-glucoside were identified as the predominant compounds in hemi-purple and purple leaves. Transcriptomic analysis revealed that structural genes associated with the anthocyanin biosynthetic pathway, chlorophyll synthesis pathway and carotenoid synthesis pathway were significantly differential expressed at the three assessed colour stages. Additionally, transcription factors associated with the MYB-bHLH-WD40 complex, including 22 R2R3-MYBs, 79 bHLHs and 44 WD40 genes, were identified as candidate regulators of the anthocyanin biosynthetic pathway. Moreover, on the basis of the identified differentially accumulated anthocyanins and key genes, we generated genetic and metabolic regulatory networks for anthocyanin biosynthesis in T. sebifera. These findings provide comprehensive information on the leaf transcriptome and three pigments of T. sebifera, thereby shedding new light on the mechanisms underlying the autumnal colouring of the leaves of this tree.

Cellulolytic and Ethanologenic Evaluation of Heterotermes indicola's Gut-Associated Bacterial Isolates.

Cellulose is the basic component of lignocellulosic biomass (LCB) making it a suitable substrate for bioethanol fermentation. Cellulolytic and ethanologenic bacteria possess cellulases that convert cellulose to glucose, which in turn yields ethanol subsequently. Heterotermes indicola is a subterranean termite that causes destructive damage by consuming wooden structures of infrastructure, LCB products, etc. Prospectively, the study envisioned the screening of cellulolytic and ethanologenic bacteria from the termite gut. Twenty six bacterial strains (H1-H26) based on varied colonial morphologies were isolated. Bacterial cellulolytic activity was tested biochemically. Marked gas production in the form of bubbles (0.1-4 cm) in Durham tubes was observed in H3, H7, H13, H15, H17, H21, and H22. Sugar degradation of all isolates was indicated by pink to maroon color development with the tetrazolium salt. Hallow zones (0.42-11 mm) by Congo red staining was exhibited by all strains except H2, H7, H8, and H19. Among the 26 bacterial isolates, 12 strains were identified as efficient cellulolytic bacteria. CMCase activity and ethanol titer of all isolates varied from 1.30 ± 0.03 (H13) to 1.83 ± 0.01 (H21) umol/mL/min and 2.36 ± 0.01 (H25) to 7.00 ± 0.01 (H21) g/L, respectively. Likewise, isolate H21 exhibited an ethanol yield of 0.40 ± 0.10 g/g with 78.38 ± 2.05% fermentation efficiency. Molecular characterization of four strains, Staphylococcus sp. H13, Acinetobacter baumanni H17, Acinetobacter sp. H21, and Acinetobacter nosocomialis H22, were based on the maximum cellulolytic index and the ethanol yield. H. indicola harbor promising and novel bacteria with a natural cellulolytic tendency for efficient bioconversion of LCB to value-added products. Hence, the selected cellulolytic bacteria can become an excellent addition for use in enzyme purification, composting, and production of biofuel at large.

Genetic Basis and Evolution of Structural Color Polymorphism in an Australian Songbird.

Island organisms often evolve phenotypes divergent from their mainland counterparts, providing a useful system for studying adaptation under differential selection. In the white-winged fairywren (Malurus leucopterus), subspecies on two islands have a black nuptial plumage whereas the subspecies on the Australian mainland has a blue nuptial plumage. The black subspecies have a feather nanostructure that could in principle produce a blue structural color, suggesting a blue ancestor. An earlier study proposed independent evolution of melanism on the islands based on the history of subspecies divergence. However, the genetic basis of melanism and the origin of color differentiation in this group are still unknown. Here, we used whole-genome resequencing to investigate the genetic basis of melanism by comparing the blue and black M. leucopterus subspecies to identify highly divergent genomic regions. We identified a well-known pigmentation gene ASIP and four candidate genes that may contribute to feather nanostructure development. Contrary to the prediction of convergent evolution of island melanism, we detected signatures of a selective sweep in genomic regions containing ASIP and SCUBE2 not in the black subspecies but in the blue subspecies, which possesses many derived SNPs in these regions, suggesting that the mainland subspecies has re-evolved a blue plumage from a black ancestor. This proposed re-evolution was likely driven by a preexisting female preference. Our findings provide new insight into the evolution of plumage coloration in island versus continental populations, and, importantly, we identify candidate genes that likely play roles in the development and evolution of feather structural coloration.

Whole-Genome Scanning for Selection Signatures Reveals Candidate Genes Associated with Growth and Tail Length in Sheep.

Compared to Chinese indigenous sheep, Western sheep have rapid growth rate, larger physique, and higher meat yield. These excellent Western sheep were introduced into China for crossbreeding to expedite the enhancement of production performance and mutton quality in local breeds. Here, we investigated population genetic structure and genome-wide selection signatures among the Chinese indigenous sheep and the introduced sheep based on whole-genome resequencing data. The PCA, N-J tree and ADMIXTURE results showed significant genetic difference between Chinese indigenous sheep and introduced sheep. The nucleotide diversity (π) and linkage disequilibrium (LD) decay results indicated that the genomic diversity of introduced breeds were lower. Then, Fst & π ratio, XP-EHH, and de-correlated composite of multiple signals (DCMS) methods were used to detect the selection signals. The results showed that we identified important candidate genes related to growth rate and body size in the introduced breeds. Selected genes with stronger selection signatures are associated with growth rate (CRADD), embryonic development (BVES, LIN28B, and WNT11), body size (HMGA2, MSRB3, and PTCH1), muscle development and fat metabolism (MSTN, PDE3A, LGALS12, GGPS1, and SAR1B), wool color (ASIP), and hair development (KRT71, KRT74, and IRF2BP2). Thus, these genes have the potential to serve as candidate genes for enhancing the growth traits of Chinese indigenous sheep. We also identified tail-length trait-related candidate genes (HOXB13, LIN28A, PAX3, and VEGFA) in Chinese long-tailed breeds. Among these genes, HOXB13 is the main candidate gene for sheep tail length phenotype. LIN28A, PAX3, and VEGFA are related to embryonic development and angiogenesis, so these genes may be candidate genes for sheep tail type traits. This study will serve as a foundation for further genetic improvement of Chinese indigenous sheep and as a reference for studies related to growth and development of sheep.

Color components determination and full-length comparative transcriptomic analyses reveal the potential mechanism of carotenoid synthesis during Paphiopedilum armeniacum flowering.

Paphiopedilum armeniacum (P. armeniacum), an ornamental plant native to China, is known for its distinctive yellow blossoms. However, the mechanisms underlying P. armeniacum flower coloration remain unclear. We selected P. armeniacum samples from different flowering stages and conducted rigorous physicochemical analyses. The specimens were differentiated based on their chemical properties, specifically their solubilities in polar solvents. This key step enabled us to identify the main metabolite of flower color development of P. armeniacum, and to complete the identification by High-performance liquid chromatography (HPLC) based on the results. Additionally, we employed a combined approach, integrating both third-generation full-length transcriptome sequencing and second-generation high-throughput transcriptome sequencing, to comprehensively explore the molecular components involved. We combined physical and chemical analysis with transcriptome sequencing to reveal that carotenoid is the main pigment of P. armeniacum flower color. Extraction colorimetric method and HPLC were used to explore the characteristics of carotenoid accumulation during flowering. We identified 28 differentially expressed carotenoid biosynthesis genes throughout the flowering process, validated their expression through fluorescence quantification, and discovered 19 potential positive regulators involved in carotenoid synthesis. Among these candidates, three RCP2 genes showed a strong potential for governing the PDS and ZDS gene families. In summary, our study elucidates the fundamental mechanisms governing carotenoid synthesis during P. armeniacum flowering, enhancing our understanding of this process and providing a foundation for future research on the molecular mechanisms driving P. armeniacum flowering.

Integrated transcriptome and metabolome analysis revealed that HaMYB1 modulates anthocyanin accumulation to deepen sunflower flower color

Key messageHanMYB1 was found to play positive roles in the modulation of anthocyanins metabolism based on the integrative analysis of different color cultivars and the related molecular genetic analyses.As a high value ornamental and edible crop with various colors, sunflowers (Helianthus annuus L.) provide an ideal system to understand the formation of flower color. Anthocyanins are major pigments in higher plants, which is associated with development of flower colors and ability of oxidation resistance. Here, we performed an integrative analysis of the transcriptome and flavonoid metabolome in five sunflower cultivars with different flower colors. According to differentially expressed genes and differentially accumulated flavonoids, these cultivars could be grouped into yellow and red. The results showed that more anthocyanins were accumulated in the red group flowers, especially the chrysanthemin. Some anthocyanins biosynthesis-related genes like UFGT (UDP-glycose flavonoid glycosyltransferase) also expressed more in the red group flowers. A MYB transcriptional factor, HanMYB1, was found to play vital positive roles in the modulation of anthocyanins metabolism by the integrative analysis. Overexpressed HanMYB1 in tobacco could deepen the flower color, increase the accumulation of anthocyanins and directly active the express of UFGT genes. Our findings indicated that the MYB transcriptional factors provide new insight into the dynamic regulation of the anthocyanin biosynthesis in facilitating sunflower color formation and anthocyanin accumulation.

"Iron Ion Relative Weathering Index": A New Index for Identifying the Weathering Degree in Red Sandstone.

The red bed region in west central and southern China is affected by hot and humid climate, where sandstone is intensely weathered. The weathered hazardous rocks seriously threaten the road and slope, making it challenging to protect the Danxia red bed. After considering the red sandstone's material composition and the local area's main weathering effects. We noticed that iron ions in red sandstone are susceptible to weathering, which leads to changes in the valence and content of iron ions. This study attempts to establish a new chemical weathering index called the "iron ion relative weathering index" (IRWI) to classify the weathering degree of red sandstone. This paper mainly explores the changes of physical characteristics (mineral composition, physical indicator, microstructure, and pore structure) from the surface to the interior of red sandstone in the actual environment and their correlation with IRWI. The study on the correlation between the physical indicators such as longitudinal wave velocity, resistivity, density, water absorption, and IRWI reveals that they have the same trends and are closely related to the weathering degree. The shallow weathering zone of Chishui red sandstone is divided into strong, medium, and slight weathering zones. Microscopically, the cementation and pore distribution of the red sandstone are consistent with the characteristics of the weathering zone. Therefore, IRWI not only is a reliable chemical quantitative method in indicating the weathering of red sandstone but also takes into account the controlling role of iron in the color development of red beds, which provides a new research idea for the quantitative identification of weathering degree and color mechanism of red sandstone.