One of the biggest environmental problems that has affected the planet is global warming, due to high concentrations of carbon (CO2), which has led to crops such as coffee being affected by climate change caused by greenhouse gases (GHG), especially by the increase in the incidence of pests and diseases. However, carbon sequestration contributes to the mitigation of GHG emissions. The objective of this work was to evaluate the carbon stored in above and below ground biomass in four six-year-old castle coffee production systems. In a trial established under a Randomized Complete Block Design (RCBD) with the treatments Coffee at free exposure (T1), Coffee-Lemon (T2), Coffee-Guamo (T3) and Coffee-Carbonero (T4), at three altitudes: below 1,550 masl, between 1,550 and 2,000 masl and above 2,000 masl. Data were collected corresponding to the stem diameters of coffee seedlings and shade trees with which allometric equations were applied to obtain the carbon variables in the aerial biomass and root and the carbon variables in leaf litter and soil obtained from their dry matter. Highly significant differences were obtained in the four treatments evaluated, with T4 being the one that obtained the highest carbon concentration both in soil biomass with 100.14 t ha-1 and in aerial biomass with 190.42 t ha-1.