Coastal Samples Research Articles

Multielement electrochemical vapor generation system coupled with atomic fluorescence spectrometer for simultaneous measurement of trace levels of As and Hg in coastal seawater samples

BackgroundToxic elements As and Hg in coastal waters affect human health through the food chain even at trace levels. The simultaneous determination of As and Hg in seawater using electrochemical vapor generation (ECVG) with atomic fluorescence spectrometer (AFS) currently has technical bottlenecks. One is the need for a simple and efficient chemical reaction cell and corresponding parameters to generate both AsH3 and Hg vapors, and the other is a suitable preservation method of the mixed standard solutions. ResultsA novel, efficient, online ECVG device was developed and interfaced with a laboratory-built multichannel AFS. The electrolytic cell adopted Sn–Pb alloy as the cathode material to generate both AsH3 and Hg vapors by electrolysis, replacing the unstable reagent tetrahydroborate (THB) usually used in most traditional vapor generation methods. The AFS was equipped with a built-in H2 generator for fuel supply, instead of the conventional acid-THB system. A mixed standard solution of As and Hg was prepared and preserved using thiourea-ascorbic acid as a fixing agent for Hg and a prereduction agent for As(V). The method detection limits (LOD, 3σ) were 0.005 and 0.003 μg/L for As and Hg, respectively. The relative standard deviations (RSD, n = 8) of the spiked samples were 2.8 % (0.50 μg/L As) and 3.1 % (0.05 μg/L Hg), respectively. The recoveries of standard spiked seawater samples with different salinities ranged from 86.1 % to 115.3 %. SignificanceThe system has been successfully applied to the simultaneous analysis of As and Hg in the seawater samples collected from the Xiamen coastal area. The study results provide a sensitive, accurate, and efficient method to promote the development and utilization of simultaneous analysis of multielement in seawaters.

Seascape Genetics and Distinct Intraspecific Diversification of the Decapod Nephrops norvegicus in the Adriatic Sea.

Norway lobster Nephrops norvegicus, a prized decapod crustacean species, is found at different depths across the East Atlantic Ocean and Mediterranean Sea. Despite management efforts, the stocks are globally characterised as overexploited. In the present study, the impact of biogeographical boundaries on the phylogeographical and demographic population status was investigated within the Adriatic Sea, addressing important genetic indices for decapod functional conservation management. Central Mediterranean, Adriatic Sea A total of 482 individuals of Nephrops divided into the 12 samples were collected across biogeographical range of the Adriatic Sea. Using the mtDNA D-loop and microsatellite markers, methods of phylogeography and seascape genetics were applied to infer offshore versus coastal population divergence, demography and structure. Significant findings include genetic differentiation between offshore and coastal samples, with higher diversity indices in open waters. The limited gene flow observed between these two areas emphasises the self-sustained nature of coastal populations. Recent demographic changes in coastal populations reflect geographical constraints, fishing pressures and fluctuations in self-recruitment success. Additionally, the study reveals historical biogeographic events shaping the Adriatic populations, with evidence suggesting lineage divergence during the upper Pleistocene and postglacial recolonisation from southern Adriatic refugia. The role of biogeographical conditions in shaping genetic structure and limited gene flow between inshore and offshore areas underscore the need for improved management strategies, emphasising the importance of marine protected areas in conserving coastal populations and maintaining overall genetic diversity of the Norway lobster in the Adriatic Sea. Genomic monitoring within current management practices is recommended.

Rapid transformation of nanobodies affinity based on AlphaFold2's high-accuracy predictions and interaction analysis for enrofloxacin detection in coastal fish

High-affinity antibodies are crucial in biosensors, disease diagnostics, therapeutic drug development, and immunological analysis, making the enhancement of antibody affinity a key research focus within the field. Computer-aided design is recognized as a time-saving and labor-efficient method for nanobodies in vitro affinity maturation. Compared to experimental mutagenesis techniques, it is advantageous due to the elimination of the need for laborious library construction and screening processes. However, these approaches are constrained by structural prediction since inaccuracy in structure could readily result in maturation failures. Herein, a novel nanobodies modification method for in vitro affinity maturation, utilizing the high accuracy prediction of AlphaFold2, was employed to rapidly transform a low affinity nanobody against enrofloxacin (ENR) into one with high affinity. The molecular docking results revealed a 1.5- to 2.5-fold increase in the number of noncovalent interactions of modified nanobodies, accompanied by a reduction in binding free energy ranging from 14.1 to 62.6%. The evaluation results from ELISA and BLI indicated that the affinity of the modified nanobodies had been enhanced by 6.2–91.6 times compared to the template nanobody. Furthermore, the modified nanobodies were employed for the detection of ENR-spiked coastal fish samples. In summary, this research proposed a nanobodies modification method from a new perspective, endowing its great application potential in biosensors, food safety, and environmental monitoring.

Congregibacter variabilis sp. nov. and Congregibacter brevis sp. nov. Within the OM60/NOR5 Clade, Isolated from Seawater, and Emended Description of the Genus Congregibacter.

Two Gram-stain-negative, aerobic, motile by means of flagella, short rod-shaped bacterial strains, designated IMCC43200T and IMCC45268T, were isolated from coastal seawater samples collected from the South Sea of Korea. Strains IMCC43200T and IMCC45268T shared 98.6% 16S rRNA gene sequence similarity and were closely related to Congregibacter litoralis KT71T (98.8% and 98.7%, respectively). Complete whole-genome sequences of IMCC43200T and IMCC45268T were 3.93 and 3.86 Mb in size with DNA G + C contents of 54.8% and 54.2%, respectively. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between the two strains were 74.5% and 23.4%, respectively, revealing that they are independent species. The two strains showed ANI values of ≤ 75.8% and dDDH values of ≤ 23.0% to the type and only species of the genus Congregibacter (C. litoralis), indicating that each strain represents a novel species. Both strains contained summed feature 3 (comprising C16:1 ω6c and/or C16:1 ω7c) and summed feature 8 (comprising C18:1 ω6c and/or C18:1 ω7c) as major fatty acid constituents. The predominant isoprenoid quinone detected in both strains was ubiquinone-8 (Q-8). The major polar lipids of the two strains were phosphatidylethanolamine, phosphatidylglycerol, phospholipids, and aminolipids. Based on the phylogenetic, genomic, and phenotypic characterization, strains IMCC43200T and IMCC45268T were considered to represent two novel species within the genus Congregibacter, for which the names Congregibacter variabilis sp. nov. and Congregibacter brevis sp. nov. are proposed with IMCC43200T (= KCTC 8133T = NBRC 116295T = CCTCC AB 2023139T) and IMCC45268T (= KCTC 92921T = NBRC 116135T) as the type strains, respectively.

Plutonium in the coastal seawater around Chinese nuclear power plants: Sources, distribution, and environmental implications

Coastal surface seawater samples within 30 km around ten Chinese nuclear power plants (NPPs) were systematically investigated. The 239+240Pu activity concentration in the samples varied from 0.226 mBq/m3 to 3.098 mBq/m3, meanwhile the 240Pu/239Pu atom ratios ranged from 0.151 to 0.353. Besides, the Pacific Proving Ground (PPG) close-in fallout and the global fallout were recognized as two primary sources of Pu in these samples. The 239+240Pu activity concentration as well as the PPG contribution showed similar trends as the Kuroshio intrusion path and the coastal currents in the China Seas, illustrating long-range transport and consuming of PPG derived Pu in the coastal China Seas. Moreover, accumulation of PPG sourced Pu in the Beibu Gulf were observed and was attributed to the continuous invasion of the high isotopic Pu that remobilized from the South China Sea (SCS).

Novel brominated flame retardants relevant for European aquatic environments: ranking of analytes to monitor and focus on the French Eastern Mediterranean coastline.

Around a hundred of novel brominated flame retardants are currently being used to replace those regulated in the 2000s. However, data about their production, usage, and toxicity is still scarce, as well as their levels of contamination in the Mediterranean Sea and the subsequent risk. Our goal was to select the relevant novel brominated flame retardants to monitor and to apply it along the northeastern Mediterranean Sea. We proposed a ranking for novel brominated flame retardants based on their production or import, occurrence, and ecotoxicology, yielding to a selection of 21 priority molecules. From this list, 16 compounds were analyzed in ten coastal suspended matter samples, together with six related chemicals. To assess their occurrence in comparison to better documented flame retardants, eight legacy polybromodiphenyl ethers, seven polychlorobiphenyls, and short- and medium-chain chlorinated paraffins were also targeted. Novel brominated flame retardants and polychlorobiphenyls were detected in all the samples. Polybromodiphenyl ethers and chlorinated paraffins were detected in nine and seven samples, respectively. Out of the 22 novel brominated flame retardants analyzed, nine were detected, with total concentrations ranging from 0.4 to 18.5ng.g-1 d.w., which was often higher than that of polybromodiphenyl ethers. A high risk for 2,4,6‑tribromophenol and PCB118 was assessed in two and six samples, respectively. To our knowledge, this is the first priority ranking and screening of most of the novel brominated flame retardants selected in the French Mediterranean Sea.

Diversity of the dinoflagellate genus <i>Tripos</i> Bory 1823 (Dinophyceae) in the Western coastal waters of Tonkin Gulf, Vietnam

Tripos is a genus of marine dinoflagellates in the family Ceratiaceae, the order Gonyaulacales (Dinophyceae). The genus Tripos has been studied in the western coastal waters of Tonkin Gulf, including 6 coastal sampling stations (Tra Co, Cua Luc, Do Son, Ba Lat, Sam Son, Cua Lo) and 2 offshore stations (Co To, Bach Long Vi) in four surveys conducted in March, June, August and November 2022. A total of 21 species belonging to the genus Tripos were initially identified in the study area. The number of species of this genus is lower in the estuarine area and higher in the offshore. The species occurred at all sampling stations, including Tripos furca, T. fusus, T. muelleri, T. trichoceros and T. breve, in which T. furca and T. fusus were the most common species. Species were common including Tripos candelabrus, T. ehrenbergii, T. gravidus, T. minutus, T. extensus and T. longipes. The species diversity in the dry season (March and November) was higher than in the rainy season (June and August). Cell density of the Tripos species varies spatially and temporally in the study area. The variation in Tripos density was related to the sampling stations, tide, sampling time, and water environment factors such as temperature, salinity, DO and pH.

Status of the transfer state of 137Cs in zooplankton and surface water fish off Fukushima during 2018–2021

Radiocaesium introduced to coastal waters by the accident at the Fukushima Dai-ichi Nuclear Power Station (F1NPS) elevated the radioactivity level in biota. The radionuclide level in zooplankton, concentration of 137Cs radioactivity in surface water fish decreased rapidly, which was the primary food source for planktivorous fish, was recognized as not to be depurated at the same level prior to the accident. To evaluate the possible cause of this phenomenon, zooplankton and surface water fish were collected off Fukushima during 2018–2021, and the presence of radioactive particles was also examined. The concentrations of stable Cs and 137Cs radioactivity were analysed along with aluminium which was an indicator element of Cs that originated from suspended particles which were attached to or ingested by zooplankton. As a result, radioactive particles were often found in coastal zooplankton samples, and stable Cs and 137Cs of this inorganic fraction were identified. After removal of this excess radioactivity, the 137Cs radioactivity in whole-body tissue of zooplankton was derived. However, the level in the soft part of zooplankton during 2018–2020 was still greater than the levels which existed before 2010. Since habitat seawater was understood to not be a substantial source of 137Cs, then 137Cs transfer along the food chain, possibly from phytoplankton or detritus of enhanced radioactivity were suggested as important sources of 137Cs. In addition, enhanced 137Cs radioactivity in zooplankton was considered consequently elevate radioactivity levels in surface-dwelling water fish off Fukushima. Although the radioactivity level was not radiologically significant in relation to seafood safety limit, enhanced 137Cs radioactivity levels in biota was demonstrated in southern waters off Fukushima. In contrast, derived 137Cs/133Cs atom ratios of fish and seawater south of 37°E and west from 142°E indicated that radiocaesium transfer between fish and the environment was in an equilibrium state, showing the environment beyond these geographical coordinates had returned to the pre-accident state.

Distribution, sources, ecological and human health risks of organic ultraviolet filters in coastal waters and beach deposits in Hainan, China

Organic ultraviolet filters (OUVFs) are extensively incorporated into both cosmetic items and industrial products and have been commonly found in water ecosystems. This study aims to examine the environmental levels, sources, ecological and human health risks of 14 commonly used OUVFs both in coastal water and beach deposit samples collected from the nearshore regions of Hainan Island and the South China Sea. This is first study highlighting the contamination of OUVFs in Hainan Island and utilizing economic and tourism data to confirm the potential source of OUVF pollution in costal aquatic and coastal ecosystem. Along the coastal tourist regions of Hainan Island, the median concentrations in coastal waters and beach deposits of these OUVFs fall within the range from 1.2 to 53.2 ng/L and 0.2–17.0 ng/g dw, respectively. In coastal water and beach deposit, the concentration of BP-3 was the highest, with median concentrations of 53.2 ng/L and 17.0 ng/g dw, respectively. Regarding human health risks, the daily intake of all 14 OUVFs through swimming was found to be 40–48 ng/kg/day. Ecological risk assessment indicates that BP-3 presents a medium risk for marine microalgae with a concurrent low risk for corals. The correlation analysis underscores a substantial interrelation of OUVFs in both coastal waters and beach deposits with various economic indicators, including annual rainfall, overnight tourists, total hotel rooms (unit), room occupancy rate, and sewage treatment capacity.

Geomorphological controls on estuary hydrodynamics with implications for diatom blooms in deglaciated coastal areas

Understanding local hydraulic conditions is imperative to coastal harmful algal bloom (HAB) monitoring. The research summarized herein describes how the locations and tidal phases selected for coastal hazard sampling can influence measurement results used to guide management decisions for HABs. Our study was conducted in Frenchman Bay, Maine, known for its complex deglaciated coastline, strong tidal influence, and shellfishing activities that are susceptible to problematic HABs such as those produced by some species (spp.) of the diatom genus Pseudo-nitzschia. In-situ measurements of current velocity, density, and turbulence collected over a semidiurnal tidal cycle and a companion numerical model simulation of the study area provide concurrent evidence of two adjacent counter-rotating sub-mesoscale eddies (2–4 km diameter) that persist in the depth-averaged residual circulation. The eddies are generated in the wake of several islands in an area with abrupt bathymetric gradients, both legacy conditions partly derived from deglaciation ∼15 kya. Increased concentrations of Pseudo-nitzschia spp. measured during the semidiurnal survey follow a trend of elevated turbulent dissipation rates near the water surface, indicating that surface sampling alone might not adequately indicate species abundance. Additional measurements of Pseudo-nitzschia spp. from two years of weekly sampling in the region show that algal cell abundance is highest where residual eddies form. These findings provide incentive to examine current practices of HAB monitoring and management by linking coastal geomorphology to hydraulic conditions influencing HAB sampling outcomes, coastal morphometric features to material accumulation hotspots, and millennial time scales to modern hydraulic conditions.

Occurrence of pharmaceuticals in Latin America: case study on hazard assessment and prioritization in Costa Rica.

Pharmaceuticals are considered as contaminants of emerging concern, and their occurrence in diverse environmental matrices has been described during the last 25years. Nonetheless, pharmaceutical occurrence has not been evenly described worldwide, and reports from some geographical areas such as most parts of Latin America are scarce. This work aims to address the situation of water pollution due to pharmaceuticals in Latin America by means of two main goals: i. First, reviewing the monitoring studies performed in Latin America on this topic (period 2009-2024), which were conducted in Brazil, Mexico, Colombia, Ecuador, Peru and Argentina, to highlight the most frequently detected compounds from each therapeutic group in the region. ii. Second, analyzing the case of Costa Rica through the hazard assessment and prioritization of pharmaceuticals based on the monitoring performed in this country (years 2011; 2018-2019). The monitoring in Costa Rica comprised a total of 163 sampling points: wastewater treatment plants (WWTPs) (14 urban WWTPs plus two landfill WWTPs; total samples n = 44 influents and n = 34 effluents), nine hospital effluents (n = 32), wastewater from livestock farms (six swine farms and seven dairy farms; n = 23 influents and n = 37 effluents), 64 continental surface water sampling points (n = 137), and 61 coastal seawater sampling points (n = 61). Risk assessment of detected concentrations by the hazard quotient (HQ) approach (period 2018-2019) revealed a total of 25 mediumorhigh-hazard compounds (out of 37 detected compounds). The prioritization approach (which included the Frequency of Appearance (FoA), the Frequency of PNEC exceedance (FoE), and the Extent of predicted no-effect concentration (PNEC) exceedance (EoE)), showed a critical list of nine pharmaceuticals: caffeine, diphenhydramine, acetaminophen, lovastatin, gemfibrozil, ciprofloxacin, ibuprofen, doxycycline and norfloxacin. These compounds should be taken into account as a first concern during the implementation of environmental policies related to pharmaceutical products in the region.

Seasonal and anthropogenic influences on bacterioplankton communities: ecological impacts in the coastal waters of Qinhuangdao, Northern China.

Marine bacterioplankton play a crucial role in the cycling of carbon, nitrogen, and phosphorus in coastal waters. And the impact of environmental factors on bacterial community structure and ecological functions is a dynamic ongoing process. To systematically assess the relationship between environmental changes and bacterioplankton communities, this study delved into the spatiotemporal distribution and predicted metabolic characteristics of bacterioplankton communities at two estuarine beaches in Northern China. Coastal water samples were collected regularly in spring, summer, and autumn, and were analyzed in combination with environmental parameters and bacterioplankton community. Results indicated significant seasonal variations in bacterioplankton communities as Bacteroidetes and Actinobacteria were enriched in spring, Cyanobacteria proliferated in summer. While Pseudomonadota and microorganisms associated with organic matter decomposition prevailed in autumn, closely linked to seasonal variation of temperature, light and nutrients such as nitrogen and phosphorus. Particularly in summer, increased tourism activities and riverine inputs significantly raised nutrient levels, promoting the proliferation of specific photosynthetic microorganisms, potentially linked to the occurrence of phytoplankton blooms. Spearman correlation analysis further revealed significant correlations between bacterioplankton communities and environmental factors such as salinity, chlorophyll a, and total dissolved phosphorus (TDP). Additionally, the metabolic features of the spring bacterioplankton community were primarily characterized by enhanced activities in the prokaryotic carbon fixation pathways, reflecting rapid adaptation to increased light and temperature, as well as significant contributions to primary productivity. In summer, the bacterial communities were involved in enhanced glycolysis and biosynthetic pathways, reflecting high energy metabolism and responses to increased light and biomass. In autumn, microorganisms adapted to the accelerated decomposition of organic matter and the seasonal changes in environmental conditions through enhanced amino acid metabolism and material cycling pathways. These findings demonstrate that seasonal changes and human activities significantly influence the structure and function of bacterioplankton communities by altering nutrient dynamics and physical environmental conditions. This study provides important scientific insights into the marine biological responses under global change.

Characterization of Microplastics and Adsorbed/Dissolved Polycyclic Aromatic Hydrocarbons in the Biggest River System in Saitama and Tokyo, Japan.

This study presents a comprehensive characterization of microplastics (MPs) and adsorbed/dissolved polycyclic aromatic hydrocarbons (PAHs) in the Arakawa River, the largest river system in Saitama and Tokyo, Japan. The MPs were sampled at various points along the river, revealing an average number density of 2.21 ± 1.48 pieces/m3, with a predominant size range of 0.5-1 mm. Polymer analysis indicated that polyethylene (PE) comprised the highest proportion of MPs (55.9%), followed by polypropylene (PP) (22.4%) and polystyrene (PS) (21.7%). Seasonal fluctuations in MPs concentration were observed, with the highest values in winter and the lowest in summer. An analysis of adsorbed PAHs revealed a median partition coefficient (Kd) value of 3.58 × 104 L/kg for MPs, indicating their affinity for PAHs. Further PAHs analysis revealed that the PAHs with the highest mean values were bicyclic naphthalene, pyrene, and fluoranthene. A comparison with coastal MPs showed differences in PAH composition, with higher proportions of high-ring PAHs observed in coastal samples. The study also investigated the distribution of PAHs in the dissolved and suspended states in the river, finding that similar PAHs were distributed in both states, with the PAHs present in MPs being about 1/10,000 of those in the dissolved and suspended states. The study underscores the importance of the continued monitoring and management of MPs and associated pollutants in river ecosystems.

The Antibacterial Efficacy of a Compound Extracted from Marine Sediment Bacterium Enterococcus Lactis (S-2): A Comparative Analysis Through In-Vitro and In-Silico Assessments.

Marine sediment bacteria have been generating considerable attention lately due to their potential as valuable reservoirs of novel antimicrobial agents. In vitro and in silico antibacterial activities of antibacterial compounds isolated from the marine sediment bacterium Enterococcus Lactis (S-2). Coastal sediment samples were collected from Rameswaram, Ramnathapuram District, Tamil Nadu, India. Bacteria were isolated using the crowded plate method, and their phenotypic and genotypic characteristics were studied. Purified bacteria were cultured in large volumes, secondary metabolites were extracted, and novel antibacterial agents were isolated from the aqueous extract. Novel compound antibacterial activity was studied through in-silico and invitro. The mechanism activity of antibacterial activity was confirmed by a high-resolution transmission electron microscope. Genotypic analysis confirmed that the isolated S-2 bacteria were Enterococcus lactis, and the aqueous extract showed antibacterial activity against Staphylococcus aureus (17 mm zone of inhibition) and Proteus mirabilis (12 mm zone of inhibition). A bioactive molecule, 13- hydroxy-9-(1-hydroxyethyl)-11-methoxy-2,4dioxapentacyclo[10.7.1.0³,⁴.0⁵,²¹.0¹³,¹⁶]icosa- 1(20),5,7,12,14(19), 16-hexane-18-one, was isolated from aqueous extracts of the S-2 bacterium. Chromatography and spectroscopic analysis confirmed the identity of the isolated compound. Novel compound potential antibacterial activity showing against S. aureus (18 mm zone of inhibition) and MIC 250 μg/mL, which was confirmed by tetrazolium staining. The antibacterial activity mechanism was confirmed by transmission electron microscopy. Molecular docking studies show good binding (-9.9 kcal/mol) of the compound with 3U2D, while molecular dynamic simulation studies confirm the conformationally stable structure of the complex between 3U2D and 13-hydroxy-9-(1-hydroxyethyl)-11-methoxy-2,4-dioxapentacyclo [10.7.1.0³,⁴.0⁵,²¹.0¹³,¹⁶]icosa-1(20),5,7,12,14(19), 16-hexane-18-one. It has been observed from the docking study of 3U2D with standard drug ciprofloxacin that the lower affinity is compared to the test ligand, which has a docking score of 7.3 kcal/mol. Out of interacting residues of protein 3U2D residue, Thr173 and Ile86 formed conventional hydrogen bonds. Marine bacterium E. lactis produces a novel antibacterial compound (13-hydroxy- 9-(1-hydroxyethyl)-11-methoxy-2,4-dioxapentacyclo[10.7.1.0³,⁴.0⁵,²¹.0¹³,¹⁶]icosa- 1(20),5,7,12,14(19),16-hexane-18-one), which shows antibacterial activity against clinical S. aureus, confirmed by in vitro and in silico analysis. This molecule can used as a lead molecule for antibacterial activity.

Microplastic concentration, characterization, and size distribution in the Delaware Bay estuary

Microplastic (MP) pollution has been widely reported across water matrices including in estuaries, which are important for the understanding of oceanic MPs. Estuaries can greatly alter the fate, transport, size distribution, and abundance of plastic pollution. The aim of this study was to quantify and characterize MP pollution in the Delaware Bay estuary USA, including the size distribution. Samples (N = 31) were collected from the mouth of the Delaware River to the coastal ocean including multiple frontal zones across two sampling campaigns (2019 and 2022). MP were extracted from the collected particles using wet peroxide oxidation and density separation with saturated sodium chloride. Particles collected on 500 μm mesh sieves were analyzed via Fourier transform infrared (FTIR) spectroscopy. Across all samples, 324 of the 1015 particles analyzed were MP, and 11 macroplastics were observed. MP concentrations ranged from below detection to 4.12 MP/m3 (mean 0.34 ± 0.80 MP/m3). No significant differences were observed between sampling sites; nonetheless, the two highest MP concentrations were observed when sampling along frontal zones with visible debris including macroplastics. Polyethylene (53%) and polypropylene (43%) were the most abundant polymers observed. The majority of the non-plastic particles were classified as particulate natural organic matter (82% of non-plastics). Particles from samples collected during 2022 (N = 864) also had color, morphology, and two size dimensions recorded. MP particle size was significantly associated with sampling site, with the coastal ocean sampling site generally having the smallest MPs. A correlation between total post-extraction particles and total plastic particles was observed. Aspect ratios for the plastics ranged from one to 40.7, with larger ratios for fibers, with a mean (±standard deviation) of 3.39 ± 4.72 (unitless). These aspect ratios can be used to select shape factors used to estimate the total volume of MP in the studied size range. Overall, these results can help inform fate, transport, and risk assessments related to estuarine plastic pollution.

Comparison of dissolved iodine measurements in seawater between inductively coupled plasma mass spectrometry and voltammetry.

Two analytical methods, inductively coupled plasma mass spectrometry (ICP-MS) combined with high-performance liquid chromatography (HPLC) and voltammetry (VM), for three chemical species of dissolved iodine (iodide, iodate, and total dissolved iodine: TDI) were compared for dozens of coastal seawater samples owing to the compatibility of data between both methods. The median differences in the measured concentrations of TDI, total inorganic dissolved iodine (TII, the sum of iodide and iodate), and iodate between ICP-MS and VM were equivalent to 9.2, 13, and 14%, respectively. These differences were within the ranges that could be explained by the repeated-measurement precision of each measurement method for TDI, TII, and iodate. The difference for iodide was 19%, which was larger than the value based on the repeated-measurement precision for both methods. This is considered to be caused by the chemical instability and lower concentrations of iodide compared to other iodine species in seawater, in addition to the heterogeneity of natural samples. Finally, both methods provided reasonable measurement values for the iodine concentration in natural seawater samples.

Endotoxin, a novel biomarker for the rapid risk assessment of faecal contamination of coastal and transitional waters

ABSTRACT Contaminated water has been responsible for the spread of disease for centuries. Current methods for testing water for faecal contamination rely on the culture of faecal indicator bacteria (FIB; Escherichia coli and Enterococci) that take 24–48 h, which leads to delays in taking proactive measures and poses a risk to public health. More rapid methods are therefore required. Here, we have tested a rapid, portable assay (Bacterisk) that detects the bacterial biomarker endotoxin in 30 min to quantify the bacterial biomass present, to evaluate 159 coastal water samples and to compare the results with the traditional culture of FIB. There was a significant correlation between the Bacterisk data given in endotoxin risk (ER) units and FIB culture that could accurately distinguish between poor and sufficient or good quality bathing water using the EU bathing directive values. Receiver operating characteristic analysis was used to determine the optimal ER threshold for coastal water samples, and the area under the curve was 0.9176 with a p-value of <0.0001. The optimal threshold was 7,300 ER units with a sensitivity of 95.45% and a specificity of 83.48%. In conclusion, we have shown that the Bacterisk assay provides a rapid and easy-to-use in situ method to assess bathing water quality.

Interannual Variation in the Zooplankton Community of the North Adriatic Sea under Short-Term Climatic Anomalies

Zooplankton are a pivotal component of the pelagic community, and their abundance and distribution are often strongly dependent on environmental conditions at sea. However, climate change can pose significant challenges to planktonic organisms. Therefore, in this study, we tried to address the possible effect of short-term climatic anomalies on the zooplankton community in the North Adriatic Sea, comparing mesozooplankton composition in June between two years with very different temperature and rainfall levels, i.e., 2019 and 2022. Environmental conditions at sea were significantly different, since 2022 faced rising temperatures in the northern part of the area and higher salinity and lower chlorophyll values in coastal samples. Our data unveiled a community shift, from a Noctiluca-dominated community to a crustacean-dominated one, and revealed that even offshore areas can be subject to changes, despite having quite stable environmental parameters. Our findings confirmed the influence of river inputs and temperature on the Adriatic community’s distribution and composition, highlighting how climate-driven changes could have unpredictable effects on the whole Adriatic ecosystem. Indeed, each species has its own role in ecosystem functioning and climatic anomalies could uncouple the fine-scale connections that make up the pelagic trophic web.

Lutimonas zeaxanthinifaciens sp. nov., a zeaxanthin-producing marine bacterium isolated from coastal sediment.

A Gram-stain-negative, yellow-pigmented, strictly aerobic, non-flagellated, motile by gliding, rod-shaped bacterium, designated strain YSD2104T, was isolated from a coastal sediment sample collected from the southeastern part of the Yellow Sea. Phylogenetic analysis based on the 16S rRNA gene sequences revealed that strain YSD2104T was closely related to three type strains, Lutimonas vermicola IMCC1616T (97.4 %), Lutimonas saemankumensis SMK-142T (96.9 %), and Lutimonas halocynthiae RSS3-C1T (96.8 %). Strain YSD2104T has a single circular chromosome of 3.54 Mbp with a DNA G+C content of 38.3 mol%. The average nucleotide identity and digital DNA-DNA hybridization values between strain YSD2104T and the three type strains (L. vermicola IMCC1616 T, L. saemankumensis SMK-142T, and L. halocynthiae RSS3-C1T) were 74.0, 86.2 and 73.6 %, and 17.9, 30.3 and 17.8 %, respectively. Growth was observed at 20-30 °C (optimum, 30 °C), at pH 6.5-8.5 (optimum, pH 7.0), and with NaCl concentrations of 1.5-3.5 % (optimum, 2.5 %). The major carotenoid was zeaxanthin, and flexirubin-type pigment was not produced. The major respiratory quinone was menaquinone-6. The major fatty acids (>10 %) were iso-C15 : 0, iso-C15 : 1 G, iso-C17 : 0 3-OH, summed feature 3 (C16 : 1 ω6c and/or C16 : 1 ω7c), and summed feature 9 (iso-C17 : 1 ω9c and/or 10-methyl C16 : 0). The major polar lipids were phosphatidylethanolamine, one unidentified aminophospholipid, two unidentified aminolipids, and eight unidentified lipids. Conclusively, based on this polyphasic approach, we classified strain YSD2104T (=KCTC 102008T=JCM 36287T) as representing a novel species of the genus Lutimonas and proposed the name Lutimonas zeaxanthinifaciens sp. nov.

Interpreting an Archaean paleoenvironment through 3D imagery of microbialites.

While stromatolites, and to a lesser extent thrombolites, have been extensively studied in order to unravel Precambrian (>539 Ma) biological evolution, studies of clastic-dominated microbially induced sedimentary structures (MISS) are relatively scarce. The lack of a consolidated record of clastic microbialites creates questions about how much (and what) information on depositional and taphonomic settings can be gleaned from these fossils. We used μCT scanning, a non-destructive X-ray-based 3D imaging method, to reconstruct morphologies of ancient MISS and mat textures in two previously described coastal Archaean samples from the ~3.48 Ga Dresser Formation, Pilbara, Western Australia. The aim of this study was to test the ability of μCT scanning to visualize and make 3D measurements that can be used to interpret the biotic-environmental interactions. Fossil MISS including mat laminae with carpet-like textures in one sample and mat rip-up chips in the second sample were investigated. Compiled δ13C and δ34S analyses of specimens from the Dresser Fm. are consistent with a taxonomically diverse community that could be capable of forming such MISS. 3D measurements of fossil microbial mat chips indicate significant biostabilization and suggest formation in flow velocities >25 cm s-1. Given the stratigraphic location of these chips in a low-flow lagoonal layer, we conclude that these chips formed due to tidal influence, as these assumed velocities are consistent with recent modeling of Archaean tides. The success of μCT scanning in documenting these microbialite features validates this technique both as a first step analysis for rare samples prior to the use of more destructive techniques and as a valuable tool for gaining insight into microbialite taphonomy.