Chlorothalonil is an important broad-spectrum fungicide with an annual application rate of above ten thousands of tons of its active ingredient on agricultural crops world-wide. The effect of procyanidolic oligomers on photo degradation of chlorothalonil was investigated under sunlight and artificial lights. Procyanidolic oligomers enhanced photodegradation of chlorothalonil in paddy, reservoir, pond and distilled waters for 1.8, 4.6, 2.7 and 22.8 fold, respectively, relative to the procyanidolic oligomers free control. The mechanism was evidenced as a radical reduction reaction by electron paramagnetic resonance spectroscopy. Upon exposure to high-pressure mercury light, chlorothalonil produced 2,4,5-trichloro-1,3-dicyanobenzene, 2,5-dichloro-1,3-dicyanobenzene and 5-chloro-1,3-dicyanobenzene that were isolated, identified and characterized. Chlorothalonil underwent primarily step-wide photo reductive dechlorination in the presence of procyanidolic oligomers, which avoided the production of the highly toxic 4-hydroxy chlorothalonil. Procyanidolic oligomers possessed strong reductive property to photo reductive dechlorination. The results contributed to understanding of chlorothalonil phototransformation and high potential of using natural product procyanidolic oligomers as an additive to minimize aquatic toxicity and pollution of chlorothalonil.