Agrochemicals Research Articles

Lambda-Cyhalothrin induced behavioural, neurotoxic and oxidative stress on vertebrate model Danio rerio (Hamilton-Buchanan 1822).

λ-cyhalothrin, a synthetic type II pyrethroid, has become increasingly popular for control of aphids, butterfly larvae, and beetles, replacing other agricultural chemicals. As a result of which, residues of this synthetic pesticide are being reported across the globe in natural water, which poses a serious threat to aquatic life. Therefore, the present study was designed to understand the toxicity effects of λ-cyhalothrin on behaviour, oxidative stress and neurotoxicity in a vertebrate aquatic model, zebrafish (Danio rerio). The fish were exposed to 0.129, 0.194 and 0.388 µg/L corresponding to 5%, 10% and 20% of 96hLC50 (1.94 µg/L) for 28 days. Upon exposure to the highest concentration (0.388 µg/L), the test animal exhibited significant alterations in behavioural patterns like number of entries to the top zone (n), decrease in average speed (m/s) and decrease in time spent in top zone (s). Moreover, the shoaling test demonstrated a significant decrease (p < 0.05) in the relative time spent by the tested fish (%) near the stimulus fish. The change in behavioural alterations might be linked to a significant decrease (p < 0.05) in the brain acetylcholine esterase activity. Furthermore, the present study also illustrates oxidative stress exerted by λ-cyhalothrin through an increase in the production of reactive oxygen species, which is again clearly depicted by a significant increase (p < 0.05) in Superoxide dismutase, Catalase and Glutathione peroxidase activities. Overall, the present study systematically demonstrates the chronic effects of λ-cyhalothrin on adult fish behaviour and physiology, which will contribute to assessing the risks of λ-cyhalothrin to organismal health.

In vitro antifungal activities of dose-dependent bioactive compound from potato peels to combat powdery mildew disease in cucumber

The search for biopolymer-based materials to replace dangerous chemicals in agriculture has become increasingly important in recent years for sustainable crop development. In our study enzymatic synthesis of isomaltose was done using potato peels. Isomaltose solvent extracts were tested for their ability to inhibit fungal pathogens like Erysiphe cichoracearum and Fusarium oxysporum. Among those tested, a dosedependent isomaltose extract exhibited significant inhibition on E. cichoracearum and F. oxysporum pathogen conidial sporulation, number of conidia and their motility. Under the in vitro studies, with isomaltose extract at (2.5 mg mL ) recorded a maximum conidial inhibition of 86.2, ?1 E. cichoracearum average number of conidia 4-27 and 5 per cent motility. While, sterile distilled water and DMSO showed maximum growth of the both the pathogens and also their motility was 92-97 per cent, respectively. Similarly, F. oxysporum maximum conidial inhibition of 88.3 and average conidia of 9-30 with motility of 7 per cent was observed after treating with 2.5 mg mL isomaltose. Moreover, isomaltose a biopolymer ?1 derived from potato peel was used in different concentrations as priming agent to cucumber seeds and were evaluated for its effectiveness to enhance plant growth parameters. Among the treatments, seeds-primed with 2.5 mg mL of isomaltose extracts in water exhibited early seedling germination of 96.8 per cent and ?1 vigor of 2210.3 and also cucumber seeds treated with 2.5 mg mL of isomaltose extracts in DMSO showed ?1 significant germination rate of 95.5 per cent and vigor index of 1987.7. Overall, these results determine that the antifungal property of water dissolved isomaltose is highly significant in exhibiting remarkable inhibitory action against Fusarium and powdery mildew phytopathogens, further the dose-dependent concentration of water dissolved isomaltose showed fair to good enhancement of seed germination which will lead to establishing a novel bio-waste agricultural formulation for the management of plant pathogens and in particular Fusarium and powdery mildew disease of cucumber and other cucurbitaceous crops.. KEYWORDS :Bio-polymer, optimize, pathogen inhibition, plant growth, seed treatment

Synthesis, crystal and molecular structure, DFT and antifungal activity studies of (E)-2-(3-methoxy-4-((6-(trifluoromethyl)pyrimidin-4-yl)oxy)styryl)-5-((2-(trifluoromethyl)benzyl)thio)-1,3,4-oxadiazole

Ferulic acid derivatives containing the 1,3,4-oxadiazole thioether and trifluoromethyl pyrimidine have displayed a wide array of pharmacological properties of interest to both medicinal and agricultural chemistry. This study focused on the synthesis of a new compound, (E)-2-(3‑methoxy-4-((6-(trifluoromethyl)pyrimidin-4-yl)oxy)styryl)-5-((2-(trifluoromethyl)benzyl)thio)-1,3,4-oxadiazole, with a ferulic acid skeleton, was synthesized via acetylation, condensation, cyclization, etherification, and thioetherification reactions. The title compound underwent comprehensive characterization using a variety of analytical techniques to gain a thorough insight into its molecular structure and properties. The structural arrangement of the compound was validated through X-ray diffraction and density functional theory calculations, while further analysis uncovered important physical and chemical attributes like molecular electrostatic potential and vibrational absorption bands. Moreover, the antifungal efficacy of the synthesized compounds was assessed, indicating their possible application in agriculture. This research lays the groundwork for the creation of novel compounds with antifungal properties.

Causes and Impacts of Water Pollution on Various water bodies in the State of Rajasthan, India: A Review

Water quality and water resources make an impression on the social, economic and political advancement of society. With the rapid growth of urbanization and industrialization linked with economic and social needs, the pollution of water has reached a level of no return. Water is defined as harmful for human and aquatic lives when it is become contaminated by unexpected substances such as heavy metals, agricultural and industrial chemicals, hydrocarbon fuels, radioactive materials, sewage, pharmaceutical drugs, and biologic agents such as bacteria, parasites, and viruses. This water is considered polluted or contaminated (Bagul et al. 2015), The problem of water pollution becomes more hazardous in a region where availability of water is critically less like the state of Rajasthan (Coyte et al. 2019). The situation of surface water pollution in arid and semi-arid areas of state is alarming. We know that every living being needs water for their survival. All living being intake water directly or indirectly from various water resources. Intake of polluted water would be harmful for them. Transport of bio-accumulative pollutants to food chain makes the situation more grievous. So, it is the need of the hour to examine the magnitude and range of water pollution in the water bodies, especially in the state like Rajasthan. In the present scenario we can’t prevent water to being polluted totally but the scaling down of pollution is imperative. It is high time to take some steps to educate and spread awareness to the people regarding this alarming issue.

Knowledge and practices related to plague persistence in plague-endemic foci, Mbulu District, Tanzania.

Plague continues to be a major public health concern in African countries. Several social practices and environmental conditions have been associated with the reoccurrence of bubonic plague, especially in places where the disease is prevalent. Therefore, it remains important to understand people knowledge, behavior and practices related to disease risks in order to identify factors that may hinder prevention and control strategies in the foci. A study survey of 100 households was conducted in Mbulu district to assess plague knowledge, factors that influence flea bite and measures used for rodent and flea control. Majority of participants (86%) were familiar with the plague disease and about (50%) mentioned swelling lymph nodes as a common symptom. Most of the participants (62%) claimed to observe human plague cases during the long rain season. The majority of participants (97%) reported to experience flea bite in their domestic settings, with most stating that they experienced more flea bites during the dry season. Houses with livestock had a greater likelihood of flea bite (OR = 2.7; 95% CI: 0.36-18.80, p = 0.267) compared to houses with no livestock. Furthermore, residents reported using both local and chemical methods to control rodents and flea inside houses. Most respondents preferred using local methods in flea control. Respondents stated that the efficacy of flea control methods being applied ranged from few days to several months. There was limited knowledge of the residual effects of the agricultural chemicals being used to control fleas among the surveyed community. Our study highlights the importance of raising awareness and adopting effective control methods for controlling fleas and lower the risk of plague transmission and other flea borne diseases in the local communities. Sensitization of the local community on the use of appropriate chemicals for flea control is urgent to avoid any potential long-term impacts of the residual effects on the health of the local communities.

First Detection of Food-Derived Agricultural Chemicals Residues in Waste Wool Fibers by Ultrasound-Assisted Extraction-QuEChERS Cleanup-UPLC-MS/MS.

Food-derived agricultural chemical residues (FACRs) accumulate gradually in organisms and can damage their nervous system, endocrine system and reproductive system, posing significant harm. Currently, there is little literature on the detection of FACRs in waste wool fibers. In this paper, an ultrasound-assisted extraction-QuEChERS (Quick, Easy, Cheap, Effective, Rugged, Safe) cleanup-UPLC-Ms/Ms method was applied for the qualitative analysis and quantitative determination of trace FACRs in waste wool fibers with 0.2% formic acid-methanol as extraction solvent and multi-selective ion scanning. Using the external standard method, it was shown that the 13 target FACRs showed good linearity in the mass concentration range of 0.1-50μg/kg. The limits of detection were 1.0-10.0μg/kg and the limits of quantification were 4.0-40.0μg/kg. The recoveries of the 13 target FACRs ranged from 78 to 112.6% at the 5-, 10- and 20-fold detection limit spiked levels, and the intra- or inter-day relative standard deviations were 2.05-6.98% or 1.98-6.99%, respectively. This method satisfied the detection requirements and can be used in applications.

Recent Advances and Outlook of Benzopyran Derivatives in the Discovery of Agricultural Chemicals.

Scaffold structures, new mechanisms of action, and targets present enormous challenges in the discovery of novel pesticides. The discovery of new scaffolds is the basis for the continuous development of modern agrochemicals. Identification of a good scaffold such as triazole, carbamate, methoxy acrylate, pyrazolamide, pyrido-pyrimidinone mesoionic, and bisamide often leads to the development of a new series of pesticides. In addition, pesticides with the same target, including the inhibitors of succinate dehydrogenase (SDH), oxysterol-binding-protein, and p-hydroxyphenyl pyruvate dioxygenase (HPPD), may have the same or similar scaffold structure. Recent years have witnessed significant progress in the discovery of new pesticides using natural products as scaffolds or bridges. In recent years, there have been increasing reports on the application of natural benzopyran compounds in the discovery of new pesticides, especially osthole and coumarin. A systematic and comprehensive review of benzopyran active compounds in the discovery of new agricultural chemicals is helpful to promote the discussion and development of benzopyran active compounds. Therefore, this work systematically reviewed the research and application of benzopyran derivatives in the discovery of agricultural chemicals, summarized the antiviral, herbicidal, antibacterial, fungicidal, insecticidal, nematicidal and acaricidal activities of benzopyran active compounds, and discussed the structural-activity relationship and mechanism of action. In addition, some active fragments were recommended to further optimize the chemical structure of benzopyran active compounds based on reference information.

Design, synthesis and bactericidal activity of novel coumarin derivatives containing pyridinium salts

Coumarin is a natural product known for its diverse biological activities. While its antifungal properties in agricultural chemistry have been extensively studied, there is limited research on its antibacterial potential. In this study, we developed several novel coumarin derivatives by combining coumarin with pyridinium salt through molecular hybridization and chemical synthesis. Our findings reveal that most of these derivatives exhibit promising antibacterial activity. Among them, derivative A25 has been identified as the most effective compound based on three-dimensional quantitative structure-activity relationships. It demonstrates significant in vitro and in vivo activity against Xanthomonas oryzae pv. oryzae (Xoo), Xanthomonas oryzae pv. oryzicola (Xoc), and Xanthomonas campestris pv. citri (Xac), outperforming the commercially available thiediazole copper. Initial investigations into its mechanism of action suggest that A25 disrupts the cell membranes of Xoc and Xoo, thereby inhibiting bacterial growth. Additionally, A25 enhances the activity of defense enzymes in rice and modulates the expression of proteins related to the pyruvate metabolism pathway. This dual action contributes to rice's resistance against bacterial infestation. We anticipate that this study will serve as a foundation for the development of coumarin-based bactericides.

Herbicide changes the role of body condition in mating interactions of a wolf spider but courtship is primarily affected by female immunity

AbstractAnimals that live in human‐impacted landscapes experience an onslaught of novel stimuli that may interfere with natural communication pathways. During mating, this interference may alter the criteria deployed to assess potential mates as males and females find they must shift their focus and emphasize alternative sensory modalities. The wolf spider, Tigrosa helluo (Araneae, Lycosidae) is common in agricultural fields where commercial formulations of herbicides with glyphosate as the active ingredient are regularly applied. With the development of genetically resistant crops, glyphosate‐based herbicides have become among the most widely used and heavily applied agricultural chemicals in the world. In a laboratory experiment, we explored the effects of this herbicide on male—female interactions during courtship, mating, and sexual cannibalism. We expected that it might impact assessment such that there was a shift in the features that were important to the outcome of mating interactions. When herbicide was present, female body condition, an indication of recent feeding success, became important to mating success. This result was, in part, due to higher rates of sexual cannibalism in parings of males and females with low body condition values. The leg raises and pedipalp waves that males perform in courtship were not affected by herbicide nor were they related to mating success but, across all treatments, they were negatively correlated with lytic activity of females as measured just prior to pairing. This result indicates that males detected this aspect of the female's physiology and that a strong immune response made the female less attractive, possibly because it indicated a current or recent infection. Taken together, these results verify that a common herbicide shifts mating criteria used by an agribiont spider and, separate from the herbicide, the immune status of females affects the reactions of courting males.

Phytobial remediation advances and application of omics and artificial intelligence: a review.

Industrialization and urbanization increased the use of chemicals in agriculture, vehicular emissions, etc., and spoiled all environmental sectors. It causes various problems among living beings at multiple levels and concentrations. Phytoremediation and microbial association are emerging as a potential method for removing heavy metals and other contaminants from soil. The treatment uses plant physiology and metabolism to remove or clean up various soil contaminants efficiently. In recent years, omics and artificial intelligence have been seen as powerful techniques for phytobial remediation. Recently, AI and modeling are used to analyze large data generated by omics technologies. Machine learning algorithms can be used to develop predictive models that can help guide the selection of the most appropriate plant and plant growth-promoting rhizobacteria combination that is most effective at remediation. In this review, emphasis is given to the phytoremediation techniques being explored worldwide in soil contamination.

Extraction and characterization of anthocyanin pigments from Iris flowers and metal complex formation

Exploring the chemical processes and factors influencing the stability of the blue color derived from anthocyanins is a crucial objective in agricultural and food chemistry research. The ability of these compounds to bind with metals could potentially stabilize anthocyanins extracted from plant-based foods or enable modifying their hues for application as natural food colorants. This study had two core objectives - first, to extract and identify the major anthocyanin pigments responsible for iris flower coloration. Second, to selectively complex purified iris anthocyanins with aluminum (Al3+) and copper (Cu2+) ions, probing the coordination chemistry underlying synthetic metalloanthocyanin formation. Fresh iris flowers were collected and anthocyanins extracted using an optimized acidic solution. After separation, anthocyanins were complexed with metals Al3+ and Cu2+ at pH 5–6 to understand better the evolution of blue and green colors in anthocyanin-metal chelates. Characterization of anthocyanins and their metal complexes utilized UV–visible spectrometry, colorimetry (L\\* a\\*b\\* values), FTIR spectroscopy, and LC-MS. Metal complexation of anthocyanins exhibited bathochromic shifts of visible absorption maxima from 538 to 584 nm for Al-complex and 538–700 nm for Cu-complex. Color changes were accompanied by decreased lightness (L\\*, from 87 to 81) and color coefficients a\\* (+5.4 to −6.8) and b\\* (−12.2 to −4.8). LC-MS analysis identified five major anthocyanin aglycones: cyanidin (Cyd, m/z 289), delphinidin (Dpd, m/z 305), petunidin (Ptd, m/z 229), malvidin (Mv, m/z 329) and pelargonidin (m/z 273), along with various glycosylated derivatives. This work successfully isolated key iris anthocyanin pigments and elucidated their metal chelation interactions underlying expanded floral color production, bridging knowledge gaps about this underexplored genus.

Examining the impact of agricultural drainage ditch management on in-stream bacterial communities involved in nitrogen cycling: insights from the Environmental Change One Health Observatory (ECO2)

IntroductionAgricultural drainage ditches are essential for maintaining flow efficiency and are often managed by brushing (i.e., vegetation clearing along ditch banks) and dredging. These maintenance practices not only impact flow but also the ditches’ capacity to process and assimilate agricultural chemicals. However, the influence of ditch management on microbial activities, essential in processing and transforming these contaminants, remains underexplored.MethodsWe conducted a four-year surface water sampling campaign in two long-established (over 40 years) agricultural drainage ditches situated in eastern Ontario, Canada. One drainage ditch underwent intensive bank brushing and channel dredging, while the other remained unmanaged. We assessed the impact of these contrasting ditch management practices on the diversity and compositional structure of surface water microbiome communities, with a particular focus on the distribution of genes associated with nitrogen (N) cycling, using shotgun metagenomics sequencing and an assembly-based metagenome approach.Results and discussionFrom 117 surface water samples, we reconstructed 157 metagenome-assembled genomes (MAGs), predominantly from the Patescibacteria superphylum. Brushing alone, conducted about 10 months prior to dredging, had an insignificant impact on the aquatic microbial community. However, dredging led to a significant reduction in community diversity and abundance of genes affiliated with denitrification, dissimilatory nitrate reduction to ammonia, and complete nitrification through comammox. Ditch management resulted in noticeable shifts in the microbial community, evidenced by the enrichment of taxa in Polaromonas, Emticicia, Flectobacillus, and Patescibacteria in the water of the managed ditch sites. The metagenomes of these taxa harbor genes involved in various nitrogen biotransformation pathways. Interestingly, following dredging, the levels of ammonia and ammonium, nitrite, and total Kjeldahl N in the managed ditch did not increase, but significantly decreased; likely due to ditch substrate removal and potentially increased flow efficiency and dilution. Being one of the few studies conducted to date, this study provided unique insights into the consequences of drainage ditch management on freshwater microbiomes involved in N cycling.

To Study the Physico Chemical Characteristics and Mineral Contant of Pomegranate Arils Juice

Background: Pomegranate arils juice is renowned for its nutritional qualities, which are influenced by various storage conditions and varietal characteristics. This study explores the physico-chemical properties and mineral content of three distinct pomegranate varieties—Ghandhri, Bedana, and Tarnab Gulabi—under different storage conditions. Objective: The primary goal of the research was to examine the impact of storage on the TSS, pH, acidity, and mineral content (iron, zinc, and calcium) of pomegranate arils juice from three regional varieties. Methods: The study was conducted at the Human Nutrition and Agriculture Chemistry laboratory at the University of Agriculture, Peshawar, and the Food Science division of the Agriculture Research Institute Tarnab. Fresh and stored juices from the three varieties were analyzed to assess changes in physico-chemical properties and mineral content. Results: Storage led to an increase in the levels of zinc and iron, with recorded increases in zinc to 0.568±0.04 ppm in Ghandhri and iron peaking at 0.19±0.2 ppm in Tarnab Gulabi. However, calcium content decreased during storage, with a notable reduction to 3.13±2.93 ppm in stored juices. TSS was highest in Ghandhri and Tarnab Gulabi at 15.6±1.02, while acidity was highest in Ghandhri at 2.139±0.19. Conclusion: The study confirms that storage significantly alters the physico-chemical properties and mineral content of pomegranate arils juice, with detrimental effects on calcium levels but beneficial impacts on zinc and iron content. Notable varietal differences were observed, with Tarnab Gulabi displaying the highest phenolic content.

Effect of Micronutrient Seed Treatments on Nutrient Uptake by Bt Cotton in Vertisol

The present investigation was carried out during the year June 2017 to January 2018 at Department of Soil Science and Agricultural Chemistry, College of Agriculture, Vasantrao Naik Marathwada Krishi Vidyapeeth, Parbhani, Maharashtra, India to study the effect of nutrient seed treatments on nutrient uptake, quality of Bt cotton and soil nutrient dynamics in vertisol. The field experiment was undertaken in a Randomized Block Design with nine treatments and three replications. The nutrient seed dressing treatments are absolute control, 100% NPK+Zinc Sulphate (ZnSo4), 100% NPK+Zn EDTA, 100% NPK+Borax (B), 100% NPK+Manganese Sulphate (MnSo4), 100% NPK+Sodium Molybdate (NaMo), 100% NPK+Copper Nitrate (CuNo3), 100% NPK+Ferrous Sulphate (FeSo4), 100% NPK+Fe EDTA seed application to Bt cotton. The maximum N, P, K, Fe, Mn, Zn, Cu, B and Mo uptake was recorded in the treatment 100 % NPK+Zn EDTA followed by 100% NPK+Fe EDTA treatment. In case of Mo uptake, the treatment 100 % NPK+Zn EDTA was significantly superior overall treatments except treatment 100% NPK+Fe EDTA and 100% NPK+Sodium Molybdate (NaMo). The minimum N, P, K, Fe, Mn, Zn, Cu, B and Mo uptake was recorded in the treatment Absolute control+100% NPK.

Impingement of NPK and Rhizobium on Physico-chemical Properties of Soil under Cluster Bean (Cyamopsis tetragonoloba L.)

The study pertaining to the present topic under field investigation entitled “effect of different levels of NPK and Rhizobium on Physico-chemical properties of soil, growth and yield attributes of cluster bean” beginning from kharif seasons of the years 2023 at Research Farm, Department of Soil Science and Agricultural Chemistry. The excavated soil sample from experimental site before conducting research operation, mentioned that, the land topography range was nearly levelled with 1-3% slope, soil is of sandy loam texture with neutral to alkaline in reaction (7.140), electrical conductivity was non-saline (0.346 dS m-1) in nature, low organic carbon content (0.38%), low to medium available N (261.39 kg ha-1), available P (14.60 kg ha- 1) and available K (193.99 kg ha-1). Among nine treatments, during field experimentation, the conjunctive use of NPK and different Rhizobium levels, together come with best results significantly. However, the physical and chemical soil parameters, cumulative mean value for Bulk density (1.42 Mg m-3 and 1.45 Mg m-3),Particle density (2.64 Mg m-3 and 2.66 Mg m-3) and Soil pH (7.140 and 7.370) was found optimum in T1 (Absolute control) at 0-15 cm depth and 15-30 cm depth, respectively. Percentage porespace (45.17% and 43.17%), Water holding capacity (42.32% and 39.70%), Electrical conductivity (0.323 dS m-1 and 0.300 dS m-1), Percentage organic carbon (0.49% and 0.46%), Available N (284.41 kg ha-1 and 281.48 kg ha- 1 ), Available P (22.54 kg ha-1 and 21.29 kg ha-1 ), Available K (210.52 kg ha-1 and 203.98 kg ha-1 ) were found optimum in T9 consisting of (@ 100% NPK + @ 100% Rhizobium) in comparison to other NPK and Rhizobium levels application.

Impact of Various Levels of Nitrogen, Potassium, Phosphorus and Biochar on Soil Physico-chemical Properties and Yield of Black gram (Vigna mungo L.) Var: Shekhar-2

At the “Central Research Farm, Soil Science and Agricultural Chemistry Department, SHUATS, Prayagraj”, an experiment titled "Impact of various levels of Nitrogen, Potassium, Phosphorus and Biochar on Soil Physico-chemical Properties and Yield of Black gram(Vigna mungo L.)Var: Shekhar-2" was carried out during the Zaid season of 2023–2024. A randomized block design was used, consisting of three variables and three levels of NPK (at 0, 50, and 100% ha-1) and biochar (at 0, 50, and 100% ha-1). An excavated soil specimen from the experimental site prior to the start of study activities showed that the soil had a sandy loam texture, a neutral to alkaline reaction, and significantly higher treatment levels.

Introduction of the difluoromethyl group at the meta- or para-position of pyridines through regioselectivity switch

Difluoromethyl pyridines have gained significant attention in medicinal and agricultural chemistry. The direct C−H-difluoromethylation of pyridines represents a highly efficient economic way to access these azines. However, the direct meta-difluoromethylation of pyridines has remained elusive and methods for site-switchable regioselective meta- and para-difluoromethylation are unknown. Here, we demonstrate the meta-C−H-difluoromethylation of pyridines through a radical process by using oxazino pyridine intermediates, which are easily accessed from pyridines. The selectivity can be readily switched to para by in situ transformation of the oxazino pyridines to pyridinium salts upon acid treatment. The preparation of various meta- and para-difluoromethylated pyridines through this approach is presented. The mild conditions used also allow for the late-stage meta- or para-difluoromethylation of pyridine containing drugs. Sequential double functionalization of pyridines is presented, which further underlines the value of this work.

Characterization of Mulberry Stalk Biochar and its Impact on Soil Nutrients Release

An incubation study was conducted with graded levels of biochar to know the soil nutrients release till 120 days after incubation at Department of Soil Science and Agricultural chemistry, University of Agricultural Sciences, GKVK, Bengaluru during 2021. The experiment consisted of 4 treatments replicated five times and was laid out in a completely randomized design. The mulberry stalk biochar was characterized and recorded a pH of 8.53 and Electrical conductivity of 0.39 dS m-1. The physical properties like bulk density (0.32 Mg m-3) and maximum water holding capacity (93.14 %) were measured. Mulberry stalk biochar had 69.37 per cent of total carbon, 0.89 per cent Nitrogen, 0.22 per cent Phosphorus, 0.65 per cent Potassium and secondary nutrients like Calcium of 0.96 per cent, 0.48 per cent Magnesium and 0.18 per cent sulphur and micronutrients like Iron (493 mg kg-1), Zinc (34.59 mg kg-1), Manganese (94.1 mg kg-1), copper (20.55 mg kg-1) and boron (33.5 mg kg-1) were recorded. It was observed that with increased levels of biochar application to soil from 5 to 10 t ha-1 positively influenced the nutrient release pattern in the soil. Higher primary, secondary and micronutrients were recorded with application of biochar @ 10 t ha-1 (T3) at 60, 90 and 120 days after incubation and lower values were recorded in control treatment (T4).

Transcriptomic point of departure determination: a comparison of distribution-based and gene set-based approaches.

A key step in assessing the potential human and environmental health risks of industrial and agricultural chemicals is to determine the toxicity point of departure (POD), which is the highest dose level that causes no adverse effect. Transcriptomic POD (tPOD) values have been suggested to accurately estimate toxicity POD values. One step in the most common approach for tPOD determination involves mapping genes to annotated gene sets, a process that might lead to substantial information loss particularly in species with poor gene annotation. Alternatively, methods that calculate tPOD values directly from the distribution of individual gene POD values omit this mapping step. Using rat transcriptome data for 79 molecules obtained from Open TG-GATEs (Toxicogenomics Project Genomics Assisted Toxicity Evaluation System), the hypothesis was tested that methods based on the distribution of all individual gene POD values will give a similar tPOD value to that obtained via the gene set-based method. Gene set-based tPOD values using four different gene set structures were compared to tPOD values from five different individual gene distribution methods. Results revealed a high tPOD concordance for all methods tested, especially for molecules with at least 300 dose-responsive probesets: for 90% of those molecules, the tPOD values from all methods were within 4-fold of each other. In addition, random gene sets based upon the structure of biological knowledge-derived gene sets produced tPOD values with a median absolute fold change of 1.3-1.4 when compared to the original biological knowledge-derived gene set counterparts, suggesting that little biological information is used in the gene set-based tPOD generation approach. These findings indicate using individual gene distributions to calculate a tPOD is a viable and parsimonious alternative to using gene sets. Importantly, individual gene distribution-based tPOD methods do not require knowledge of biological organization and can be applied to any species including those with poorly annotated gene sets.

A Novel Approach to Integrate Human Biomonitoring Data with Model Predicted Dietary Exposures: A Crop Protection Chemical Case Study Using Lambda-Cyhalothrin.

The appropriate use of human biomonitoring data to model population chemical exposures is challenging, especially for rapidly metabolized chemicals, such as agricultural chemicals. The objective of this study is to demonstrate a novel approach integrating model predicted dietary exposures and biomonitoring data to potentially inform regulatory risk assessments. We use lambda-cyhalothrin as a case study, and for the same representative U.S. population in the National Health and Nutrition Examination Survey (NHANES), an integrated exposure and pharmacokinetic model predicted exposures are calibrated to measurements of the urinary metabolite 3-phenoxybenzoic acid (3PBA), using an approximate Bayesian computing (ABC) methodology. We demonstrate that the correlation between modeled urinary 3PBA and the NHANES 3PBA measurements more than doubled as ABC thresholding narrowed the acceptable tolerance range for predicted versus observed urinary measurements. The median predicted urinary concentrations were closer to the median measured value using ABC than using current regulatory Monte Carlo methods.