Changes In Community Structure Research Articles

Effects of different soil and water conservation measures on plant diversity and productivity in Loess Plateau

Many soil and water conservation measures (SWCM) have been implemented in the Loess Plateau of China, and they have an impact on ecosystems all levels and involve complicated mechanisms. Previously, studies typically focused on a single factor's effect on diversity or productivity. With this background, the current investigation embarked on an extensive study, with vegetation survey conducted in the no measure plots (NM), vegetation measure plots (VM) and engineering measure plots (EM) in the Loess Plateau of China. We used structural equation models (SEM) to explain the mechanism by which SWCM affects plant productivity and diversity. VM have direct effects on plant diversity, and EM have direct effects on soil properties and community structure. The two measures also had indirect effects on plant functional traits and community structure. The results show that the changes in plant functional traits and community structure by SWCM decreased plant diversity, whereas the increase of productivity was primarily dominated by improvements in community structure, and we conclude that variability in plant diversity and productivity across different measures on the Loess Plateau was primarily due to the responses of different plants to variable soil properties and the community responses. It was also emphasized that vegetation measures were beneficial to the increase of biomass per plant, while engineering measures were more beneficial to the growth of dominant species. These findings provide a theoretical foundation for vegetation management and restoration after the application of different SWCM.

Effects of polyethylene microplastics with different particle sizes and concentrations on the community structure and function of periphytic biofilms

The widespread use of microplastics (MPs) inevitably lead to their release into aquatic environment, where they are likely to encounter the periphytic biofilms, leading to changes in microbial community structure and function. However studies on the toxicity of MPs with different particle sizes and concentrations to biofilms are still lacking. Here, the effects of polyethylene (PE) MPs with three sizes (10, 40 and 120 µm) and two concentrations (2 and 20 mg/L) on biofilm communities were investigated in microcosms over a 28-day incubation period. High-throughput sequencing showed that the alpha and beta diversity of biofilm community were significantly altered by MPs, depending on their size and concentration. Typically, larger particle sizes and higher concentrations resulted in more significant changes in biofilm community structure, indicating a stronger shading effect of larger particles. Compared to the controls, 120 µm MPs treatments significantly reduced the Chao1 and Shannon index of biofilm community regardless of the concentration, while 40 µm MPs reduced the Shannon index only at high concentrations. Moreover, MPs resulted in the changes in the abundances of bacterial communities, with the abundance of Cyanobacteria increasing significantly while that of Proteobacteria and Bacteroidetes decreasing in all treatments. Interestingly, functional analysis by FAPROTAX suggested that a decrease in the abundance of chemoheterotrophy genes and an increase in photoautotrophic- and nitrification-associated genes were observed after exposure to MPs, leading to potential changes of the carbon and nitrogen metabolism of biofilms. These results highlighted that MPs exposure had negative impacts on microbial community structure and function, which in turn affects microbial-mediated processes.

Invasion by Cenchrus spinifex changes the soil microbial community structure in a sandy grassland ecosystem

Continuous nitrogen deposition increases the nitrogen content of terrestrial ecosystems and alters the soil nitrogen cycling process. Invasive plants have strong environmental adaptability, which can not only affect the composition and diversity of soil microbial community but also significantly affect the transformation process of soil nitrogen, leading to successful invasion. Currently, research on invasive plant soil ecosystems mainly focused on changes in soil nutrients and soil microorganisms. As an invasive annual grass weed with strong ecological adaptability, the impact of Cenchrus spinifex at different growth periods on soil environment and soil microbial structure composition and diversity in sandy grassland ecosystems is still unclear. In this study, soil samples were collected from four habitats with different degrees of invasion in situ during the vegetation and reproductive growth periods of Cenchrus spinifex. High-throughput sequencing and qPCR technology were used to analyze the changes in the composition, structure and diversity characteristics of the soil microbial communities during Cenchrus spinifex invasion. The results indicated that Cenchrus spinifex invasion had different effects on the soil environment at different growth periods, and Cenchrus spinifex had a preference for the utilization of ammonium nitrogen during vegetation growth period. Moreover, Cenchrus spinifex invasion significantly changed the composition and structure of soil bacterial communities, and the response of soil bacterial and fungal communities to the invasion was inconsistent. Additionally, the bacterial network was more stable than the fungal network. At different growth periods, Cenchrus spinifex had a significant impact on the key microbial communities of soil nitrogen cycling. The invasion increased the abundance of nifH and AOA-amoA, while decreased the abundance of AOA-amoB. Alkaline hydrolyzed nitrogen, total nitrogen and total phosphorus content were key factors that affect vegetation growth period and change the key microbial communities of nitrogen cycling. Alkaline hydrolyzed nitrogen, total phosphorus and organic carbon were key factors in reproductive growth period that alter the nitrogen cycling of key microbial communities.

Drip irrigation shapes the soil bacterial communities and enhances jujube yield by regulating the soil moisture content and nutrient levels

In the agricultural zones of the arid Xinjiang region of China, reducing irrigation is mandatory. However, irrigation affects the composition and diversity of the soil bacterial community which is vital to crop yield. To the best of our knowledge, very little research has been conducted on the relationships among the soil bacterial community, irrigation method, and yield as well as their underlying in jujube agroecosystems. Here, we investigated the soil physicochemistry and bacterial communities in jujube fields subjected to drip irrigation (DI) and traditional flood irrigation (FI), and their associations with yield at the flowering and fruit set (FFS) and end-of-growth (EG) stages. Under DI, the jujube yield was 8712.00 ± 24.54 kg/hm2, which was 7.64% higher than that obtained under FI (8094.33 ± 43.67 kg/hm2). DI increased the relative soil bacteria community diversity by decreasing the moisture content and increasing the nutrient levels in the soil. DI also transformed the soil bacterial community so that Bacteroidota predominated at the FFS stage and the probiotics Chloroflexi and Firmicutes predominated at the EG stage. A co-occurrence network analysis showed that DI created stable complex Soil bacteria communities in jujube fields, Though Dependentiae and Deferriberota had low relative abundance, they were nonetheless key nodes in the soil bacterial community network. A neutral community model (NCM) revealed that stochastic processes drove the soil bacterial community assembly whereas DI promoted deterministic processes by regulating the soil moisture content and nutrient levels. Partial least squares path modeling (PLS-PM) disclosed that DI affected the soil bacterial community structure by decreasing the moisture content (−0.342 **) and increasing the nutrient levels (0.557 **) in the soil. The PLS-PM also demonstrated that the observed change in the soil bacterial community structure was the main reason for the increase in jujube yield (1.098 **). The present work provides insights into the mechanisms underlying the correlations between the soil bacterial community and crop yield in response to changes in the irrigation method.

Linking seasonal plankton succession and cellular trace metal dynamics in marine assemblages

Factors affecting trace metal dynamics in marine plankton still need to be fully understood. Underlying mechanisms affecting cellular metal distribution, seasonal changes, and the influence of plankton community structure are poorly explored. This study comprehensively analyzed the seasonal changes in environmental factors, plankton community structure, and their impact on plankton cellular metal dynamics. Plankton samples were isolated, and trace metals (Cr, Mn, Fe, Co, Ni, Cu, As, Cd, Hg, and Pb) were analyzed with an inductively coupled plasma mass spectrometer (ICP-MS). Plankton community structure significantly changed with seasons (p < 0.05), which were mainly driven by temperature (seasonal change) and nutrients (eutrophication). Mean plankton cellular trace metals did not significantly change (p > 0.05) in the study area but were higher along estuaries likely due to differences in metal influx from rivers. However, their distribution patterns significantly differ between the wet and dry seasons, likely influenced by the changes in community structure and anthropogenic influx. Cellular trace metals, particularly in phytoplankton, strongly correlated with selected species suggesting the impacts of community structure in trace metal distribution. Hence, the influence of environmental factors in driving plankton succession may have caused a ripple effect on cellular trace metal distribution, especially in phytoplankton. However, both blooming species Skeletonema and Chaetoceros (diatoms) showed a contrasting relationship with cellular metals, suggesting the cooccurrence of bioaccumulation or biodilution mechanisms. This study shows the potential influence of community structure in cellular trace metal dynamics for marine plankton assemblages. However, more than plankton abundance and functional diversity, i.e., species diversity, might be needed to assess the community-level impacts on cellular metals.

Water table level controls methanogenic and methanotrophic communities and methane emissions in a Sphagnum-dominated peatland.

Peatlands are important sources of the greenhouse gas methane emissions equipoised by methanogens and methanotrophs. However, knowledge about how microbial functional groups associated with methane production and oxidation respond to water table fluctuations has been limited to date. Here, methane-related microbial communities and the potentials of methane production and oxidation were determined along sectioned peat layers in a subalpine peatland across four Sphagnum-dominated sites with different water table levels. Methane fluxes were also monitored at these sites. The results showed that mcrA gene copies for methanogens were the highest in the 10- to 15-cm peat layer, which was also characterized by the maximum potential methane production (24.53 ± 1.83 nmol/g/h). Copy numbers of the pmoA gene for type Ia and Ib methanotrophs were enriched in the 0-5 cm peat layer with the highest potential methane oxidation (43.09 ± 3.44 nmol/g/h). For the type II methanotrophs, the pmoA gene copies were higher in the 10- to 15-cm peat layer. Hydrogenotrophic methanogens and type II methanotrophs dominated the methane functional groups. Deterministic process contributed more to methanogenic and methanotrophic community assemblages in comparison with stochastic process. The level of water table significantly shaped methanogenic and methanotrophic community structures and regulated methane fluxes. Compared with vascular plants, Sphagnum mosses significantly reduced the methane emissions in peatlands. Collectively, these findings enhance a comprehensive understanding of the effect of the water table level on methane functional groups, with consequential implications for reducing methane emissions within peatland ecosystems.IMPORTANCEThe water table level is recognized as a critical factor in regulating methane emissions, which are largely dependent on the balance of methanogens and methanotrophs. Previous studies on peat methane emissions have been mostly focused on spatial-temporal variations and the relationship with meteorological conditions. However, the role of the water table level in methane emissions remains unknown. In this work, four representative microhabitats along a water table gradient in a Sphagnum-dominated peatland were sampled to gain an insight into methane functional communities and methane emissions as affected by the water table level. The changes in methane-related microbial community structure and assembly were used to characterize the response to the water table level. This study improves the understanding of the changes in methane-related microbial communities and methane emissions with water table levels in peatlands.

Community structure and niche differentiation of endosphere bacterial microbiome in Camellia oleifera.

Understanding the changes in bacterial community structure in different microenvironments of Camellia oleifera is essential to better explore the benign interaction between beneficial microorganisms and plants. Using Camellia oleifera trees, a Chinese wooden oil plant as a model ecosystem, we characterized the archaeal and bacterial microbiome across five different tissue-level niches using 16S rRNA gene analyses. Our research indicates that the diversity of Camellia oleifera endophytic bacterial communities is highly dependent on the plant compartment. The species replacement process (69.90%) is the dominant factor in the differences in bacterial community structure. The dominant bacteria phyla (Proteobacteria, Acidobacteria, Actinobacteria, Bacteroidetes, Firmicutes, Chloroflexi, and Verrucomicrobia) of Camellia oleifera show a significant plant compartment (roots, stems, leaves, fruits) enrichment effects. A variety of bacteria (Hymenobacter, Allorhizobium-Neorhizobium-Pararhizobium-Rhizobium, Mesorhizobium, Bradyrhizobium, Bacillus, Ochrobactrum, Pantoea, Pseudomonas, etc.) with nitrogen-fixed potentials are enriched in Camellia oleifera tissue. In addition, the hub bacterial groups of Camellia oleifera are Nitrospira, Haemophilus, Staphylococcus, Ruminiclostridium, and Ochrobactrum. They are widespread colonization in various tissues with a low relative abundance and may play an important role in the nitrogen cycle, host life promotion, and plant defense. This study provides a holistic understanding of the endosphere bacterial community structure, which is one of the most complete ecological niche-level analyses of Camellia oleifera. These results provide a scientific theoretical basis for an in-depth discussion of plant-endosphere microbial interaction and better exploration of benign interaction of beneficial microorganisms and plants.IMPORTANCEMicroorganisms inhabited various tissues of plants and play a key role in promoting plant growth, nutritional absorption, and resistance. Our research indicates that the diversity of Camellia oleifera endophytic bacterial communities is highly dependent on the plant compartment. Proteobacteria, Acidobacteria, Actinobacteria, Bacteroidetes, Firmicutes, Chloroflexi, and Verrucomicrobia are dominant bacteria phyla. The tissues of Camellia oleifera contain various bacteria with nitrogen fixation potential, host life promotion, and plant defense. This study provides a scientific theoretical basis for an in-depth discussion of plant-endosphere microbial interaction and better exploration of benign interaction of beneficial microorganisms and plants.

A change in substance and microbial community structure during the co-composting of kitchen waste anaerobic digestion effluent, sewage sludge and Chinese medicine residue

Anaerobic digestion is a resource recovery method for organic waste, gaining attention due to carbon reduction. Disposing of anaerobic digestion effluent (ADE) is crucial for developing anaerobic digestion, but conventional wastewater treatment fails to effectively recover nutrients contained in the ADE. In the present study, the ADE without solid-liquid separation was mixed with sewage sludge and Chinese medicine residue for the composting, where the ADE could be recovered at high temperature through humification. Besides, the nitrogen balance, humification process, and microbial dynamics during the composting process were studied. The results showed that the group supplemented with ADE could increase the nitrogen retention efficiency by 2.21 % compared to the control group. High ammonia nitrogen content and salinity did not negatively affect the maturity and phytotoxicity of compost products and even increase the humification degree of compost products. Moreover, additional ADE may not alter microbial community structure, which could contribute to microbial succession. This is the first time to investigate the substance transformation and shift in microbial community structure while applying composting process for ADE treatment, in which the anaerobic-aerobic collaborative disposal process provides an alternative solution for the recovery of ADE.

Composition of fungal communities upon multiple passaging of rhizosphere microbiome for salinity stress mitigation in Vigna radiata.

The top-down approach of microbiome-mediated rhizosphere engineering has emerged as an eco-friendly approach for mitigating stress and enhancing crop productivity. It has been established to mitigate salinity stress in Vigna radiata using multi-passaging approach. During the process of acclimatization under increasing levels of salinity stress, the structure of rhizospheric microbial community undergoes dynamic changes, while facilitating stress mitigation in plants. In this study, using ITS-based amplicon sequencing, the dynamics of rhizosphere fungal community was unravelled over successive passages under salt stress in Vigna radiata. Clear shifts were evident among the fungal community members under stress and non-stress conditions, upon application of acclimatized rhizosphere microbiome in Vigna radiata across successive passages. These shifts correlated with enhanced plant biometrics and reduced stress marker levels in plant. Significant changes in the fungal community structure were witnessed in rhizosphere across passaging cycles under salinity stress, which possibly facilitated stress mitigation in Vigna radiata.

Contrasting mechanisms of nutrient mobilization in rhizosphere hotspots driven by straw and biochar amendment

Straw return strategies are widely used green management practices that can alter soil organic matter transformation and dynamics through changes in microbial community structure and functions. How the exogenous input of organic materials of contrasting qualities affects the composition of dominant taxa, growth, and microbial functional properties related to nutrient acquisition in space remains unclear. In this study, we investigated the hotsopts and kinetics of C- and N-acquiring hydrolases, microbial growth, and bacterial community structure in maize rhizosphere hotspots after the addition of straw and straw-derived biochar using soil zymography, substrate-induced respiration and high-throughput sequencing. Compared with no amendment and maize straw-derived biochar, straw addition increased the growing biomass and microbial specific growth rate by 1.2–1.6 and 1.7–2.0-fold, respectively, indicating the relative dominance of fast-growing r-strategists. This corresponds to an increased relative abundance of the keystone taxa Firmicutes and their gene copies encoding β-1,4-glucosidase (BG) and β-N-acetylglucosaminidase (NAG). The potential activity and affinity (Vmax and Km) of BG increased 2.2 and 1.8 times, respectively, and those of NAG increased 4.0 and 2.0 times, respectively. In contrast, the relative abundance of Actinobacteria belonging to K-strategists increased in the biochar-amended soil. This resulted in slower growth and retarded enzymatic activity than the straw return treatment. Biochar enhanced the root biomass by 31% and increased the rhizosphere hotspot extents of BG and NAG by 26% and 47%, respectively. The highest robustness and modularity of the co-occurrence network indicated a more stable network with biochar input. In summary, the addition of straw accelerated rhizosphere nutrient cycling by triggering microbial growth, especially fast-growth r-strategists (Firmicutes), and synthesizing a large number of enzymes. In contrast, the addition of biochar increased rhizosphere nutrient mobilization by expanding the extent of rhizosphere hotspots to mobilize nutrients from a larger soil volume. This suggests that there are different strategies for nutrient mobilization in the rhizosphere with contrasting exogenous C addition.

Monitoring of multiple fish species by quantitative environmental DNA metabarcoding surveys over two summer seasons.

Periodic monitoring can provide important information for the protection of endangered fish, sustainable use of fishery resources and management of alien species. Previous studies have attempted to monitor fish using non-invasive environmental DNA (eDNA) technology, generally employing quantitative PCR to quantify the eDNA concentration. However, the throughput was limited. High-throughput metabarcoding technology can detect the DNA of multiple species simultaneously in a single experiment but does not provide sufficient quantification. In this study, we applied a quantitative metabarcoding approach to simultaneously quantify the eDNA concentration of an entire fish assemblage in a small reservoir over two summer seasons. Traditional surveys were also conducted to investigate the individuals of fish. The eDNA concentrations were quantified using quantitative metabarcoding, and the fish species detected using this approach were highly consistent with the results of traditional fish monitoring. A significant positive relationship was observed between the eDNA concentration and fish species abundance. Seasonal changes in fish community structure were estimated using eDNA concentrations, which may reveal the activity seasons of different fish. The eDNA concentrations of different fish species peaked at different water temperatures, reflecting the differential responses of fish species to this environmental factor. Finally, by detecting outlier eDNA concentrations, the spawning activities of 13 fish species were estimated, 12 of which were roughly consistent with the current knowledge of fish spawning periods. These results indicate that quantitative eDNA metabarcoding with dozens of sampling times is useful for the simultaneous ecological monitoring of multiple fish species.

Effects of nutrient injection on the Xinjiang oil field microbial community studied in a long core flooding simulation device.

Microbial Enhanced Oil Recovery (MEOR) is an option for recovering oil from depleted reservoirs. Numerous field trials of MEOR have confirmed distinct microbial community structure in diverse production wells within the same block. The variance in the reservoir microbial communities, however, remains ambiguously documented. In this study, an 8 m long core microbial flooding simulation device was built on a laboratory scale to study the dynamic changes of the indigenous microbial community structure in the Qizhong Block, Xinjiang oil field. During the MEOR, there was an approximate 34% upswing in oil extraction. Based on the 16S rRNA gene high-throughput sequencing, our results indicated that nutrition was one of the factors affecting the microbial communities in oil reservoirs. After the introduction of nutrients, hydrocarbon oxidizing bacteria became active, followed by the sequential activation of facultative anaerobes and anaerobic fermenting bacteria. This was consistent with the hypothesized succession of a microbial ecological "food chain" in the reservoir, which preliminarily supported the two-step activation theory for reservoir microbes transitioning from aerobic to anaerobic states. Furthermore, metagenomic results indicated that reservoir microorganisms had potential functions of hydrocarbon degradation, gas production and surfactant production. Understanding reservoir microbial communities and improving oil recovery are both aided by this work.

Effects of distinct manure amendments on microbial diversity and activity in Chernozem and Retisol

The application of manure has the potential to enhance soil health by increasing organic matter content and stimulating dormant soil-borne microorganisms. However, this treatment also carries the risk of side effects, including the invasion and spread of manure-borne pathogens. To assess the survival of manure-borne microbes in soil and their introduction into the soil microbiome, a laboratory experiment was conducted. Fresh cattle, swine, and poultry manures were applied at a rate of 50 t/ha to two different soil types: Chernozem and Retisol. The soil samples, including both control and manure-amended soils, were incubated in microcosms for a period of 6 months. Analysis of the samples was performed prior to fertilization, as well as at 1- and 6-months intervals following manure application. The analysis involved determining the gene numbers of archaea, bacteria, and fungi, as well as examining the taxonomic and physiological profiles of the microbial communities. The response of the microbial communities in the two soils to the manure application varied. In Chernozem, there was an increase in microbial abundance, activation of archaea and bacteria, and a moderate shift in the structure of prokaryotic community. On the other hand, the microbial community in Retisol did not show significant activation due to the manure amendments, but notable changes in both community structure and functioning were observed during the experiment. It was found that more manure-borne genera survived after 6 months in Retisol compared to Chernozem. Consequently, manure amendments could pose a greater risk of microbial contamination in soils characterized by low microbial activity and abundance.

Temporal and spatial dynamic changes of planktonic bacteria community structure in Li River, China: a seasonal survey.

A combined temporal and spatial research approach helps us to evaluate the ecological status of a river scientifically and comprehensively. To understand the response mechanisms of bacteria in the Li River to different environments, we conducted a 1-year study (2020-2021) and collected water samples from 18 sections of the river in October, January, April, and August. 16S sequencing was used to study the composition and structure of bacterial communities in Li River at different temporal and spatial scales. The results showed that NO3--N, TP, T, pH, and DO were significantly different on spatial and temporal scales. Alpha diversity of planktonic bacteria in Li River fluctuated significantly with the season, reaching its highest in summer. Proteobacteria remained the most dominant phylum in all seasons, but the differential microorganisms varied between seasons. Although the abundance of metabolic functions of planktonic bacteria did not show significant differences between seasons, we found that DO, TP, T, and COD were the key environmental factors affecting bacterial metabolism. In addition, the co-occurrence network analysis showed that the autumn network had a higher number of nodes and edges and exhibited a high degree of complexity, while the summer network had the highest degree of modularity and exhibited greater stability. These results deepen our knowledge of the response mechanisms of river microorganisms to temporal and spatial changes and provide a scientific reference for the study of river ecosystems.

Spatio-temporal dynamics of phytoplankton in a diversion reservoir and the major influencing factors: taxonomic versus functional groups classification.

Identifying factors affecting phytoplankton dynamics is crucial to the management of aquatic ecosystems. A lot of scholars have conducted intensive studies on phytoplankton in lake or reservoirs, but not many studies have been conducted on diversion reservoirs. To explore the seasonal and spatial variation of phytoplankton communities and their relationship with environmental factors in the context of water diversion, a case study was carried out at XiKeng (XK) reservoir in South China. In this study, month-by-month water samples and phytoplankton were collected from this reservoir from December, 2021, to July, 2022. The results showed that the phytoplankton community was characterized by significant spatial and temporal variations. There were significant differences in phytoplankton abundance and structure in the reservoirs in terms of time. The abundance of phytoplankton cells and the proportion of Cyanobacteria in the reservoir showed a trend of increasing from autumn to spring and then decreasing from spring to summer, while the functional group evolved from S1 in autumn to SN in spring and summer. The abundance of phytoplankton was influenced by the dynamic water division and the characteristics of the reservoir itself, resulting in a spatial distribution characteristic of AIII > AII > AI. Water temperature (WT) and nutrients were the key factors driving the changes in phytoplankton abundance and community structure in the reservoir. These findings will deepen our understanding of the spatial and temporal dynamics of phytoplankton community structure in diversion reservoirs and provide a basis for freshwater water ecological management strategies.

Differences in Fungal Communities in Different Material Cellar Sediments and Their Correlation with Environmental Factors

There are rich and diverse fungal communities in rainfall-cellar sediments. Fungi play a key role in the rainfall-cellar ecosystem as a bridge and link for material exchange between the rainfall-cellar ecosystem and the sediments. The changes in fungal community structure are usually closely related to the changes in environmental factors. The 16S rRNA gene Illumina MiSeq high-throughput sequencing technology was used to study the diversity and difference of fungal communities in the cellar sediments under two different catchment environments. The results revealed that the cellar sediments under the concrete catchment environment had higher diversity and richness of fungal communities than those under the loess land catchment environment. The dominant bacteria of the fungal communities under the two catchment environments were the same, namely Ascomycota, Basidiomycota, and Zygomycota, which constituted more than 90% of the abundance of the bacteria; however, the former had better homogeneity and stability. The indicator species based on LEfSe analysis demonstrated that Basidiobolales had the largest contribution to the diversity in the catchment environment of the loess land, and Mycosphaerella had the smallest contribution; Saccharomycetales contributed the most to the diversity in the concrete concentration environment, whereas Periconia contributed the least. The results of the co-occurrence network of the microbial community and environmental factors demonstrated that the positive relationship between fungi and environmental factors was stronger than the negative relationship. The research results have enhanced the understanding of the diversity of fungal communities in the cellar sediments and provided a reference for ensuring the drinking safety of rainwater harvesting cellar water for humans and livestock and improving the quality of cellar water.

Increase on environmental seasonality through the European Early Pleistocene inferred from dental enamel hypoplasia

An in-depth study of the Early Pleistocene European remains of Hippopotamus has allowed the first detailed description of the incidence and types of dental alterations related to palaeopathologies and potentially linked to climatic and environmental factors. The results of a long-term qualitative and quantitative assessment highlight the importance of nutrient deficiencies on the development of dental enamel hypoplasia in Hippopotamus. Glacial cyclicity and the resulting changes in humidity and plant community structure conditioned the local environments critical for the survival of this taxon. Two main intervals of putative constrained nutritionally restrictions were detected at ca. 1.8 Ma and ca. 0.86 Ma (i.e., MIS63 and MIS21, respectively). Statistical comparisons show an increase in the frequency of dental hypoplasia between these two chronological periods, thus reinforcing the idea of increased seasonality in the circum-Mediterranean environments during the Early Pleistocene.

Identification of rare microbial colonizers of plastic materials incubated in a coral reef environment.

Plastic waste accumulation in marine environments has complex, unintended impacts on ecology that cross levels of community organization. To measure succession in polyolefin-colonizing marine bacterial communities, an in situ time-series experiment was conducted in the oligotrophic coastal waters of the Bermuda Platform. Our goals were to identify polyolefin colonizing taxa and isolate bacterial cultures for future studies of the biochemistry of microbe-plastic interactions. HDPE, LDPE, PP, and glass coupons were incubated in surface seawater for 11 weeks and sampled at two-week intervals. 16S rDNA sequencing and ATR-FTIR/HIM were used to assess biofilm community structure and chemical changes in polymer surfaces. The dominant colonizing taxa were previously reported cosmopolitan colonizers of surfaces in marine environments, which were highly similar among the different plastic types. However, significant differences in rare community composition were observed between plastic types, potentially indicating specific interactions based on surface chemistry. Unexpectedly, a major transition in community composition occurred in all material treatments between days 42 and 56 (p < 0.01). Before the transition, Alteromonadaceae, Marinomonadaceae, Saccharospirillaceae, Vibrionaceae, Thalassospiraceae, and Flavobacteriaceae were the dominant colonizers. Following the transition, the relative abundance of these taxa declined, while Hyphomonadaceae, Rhodobacteraceae and Saprospiraceae increased. Over the course of the incubation, 8,641 colonizing taxa were observed, of which 25 were significantly enriched on specific polyolefins. Seven enriched taxa from families known to include hydrocarbon degraders (Hyphomonadaceae, Parvularculaceae and Rhodobacteraceae) and one n-alkane degrader (Ketobacter sp.). The ASVs that exhibited associations with specific polyolefins are targets of ongoing investigations aimed at retrieving plastic-degrading microbes in culture.

Spatial and temporal distribution of fish egg communities in the adjacent waters of Daya Bay nuclear power plant and their relationship with environmental factors

The thermal discharge of Daya Bay Nuclear Power Plant has a certain impact on the ecological environment of the adjacent waters. In order to understand and evaluate changes in the fish egg community structure in the adjacent waters of Daya Bay Nuclear Power Plant and their relationship with environmental factors, four surveys were conducted to investigate fish eggs in January (winter), March (spring), August (summer) and November (autumn) of 2020. A total of 100,985 fish eggs were collected and 17 taxa were identified, belonging to five orders, 14 families and 17 genera. Among them, Perciformes and Clupeiformes were the main contributing taxa to fish egg species and abundance in the waters adjacent to Daya Bay Nuclear Power Plant. The number of fish egg species ranged from high to low was summer, spring, autumn and winter; the average abundance ranged from high to low was spring, summer, winter and autumn. The results showed that except in winter, the average abundance of fish eggs was greater in northeast area than in southwest area. The Shannon-Weiner species diversity index (H’), Pielou evenness index (J’) and Margalef richness index (d) were significantly different between seasons, but none were significantly different between areas. The results of NMDS analysis showed that there were significant differences in fish egg communities between seasons. Surface seawater temperature the average abundance of fish eggs was positively correlated in the results of all four seasons. Although the entrainment effect of nuclear power plant water intake and thermal pollution of partial waters owing to thermal discharge can cause some loss of fish eggs, fish resources can still be effectively maintained.

Response of soil nitrogen components and its vertical distribution to rainfall redistribution during Robinia pseudoacacia forest restoration on the Loess Plateau

The effects of vegetation restoration on soil moisture dynamics and nutrient content have been widely studied; however, the knowledge on variation in rainfall redistribution and soil nitrogen component characteristics remain limited, particularly with respect to their relationship in restored ecosystems. Therefore, the characteristics of plant community structure, rainfall redistribution, and soil nitrogen components from farmland and Robinia pseudoacacia (RP) plantations of four restoration ages (12, 20, 30, and 45 a) were investigated and measured in the Wuliwan watershed in the Loess Plateau, China. The results showed that changes in plant community structure affected the rainfall redistribution processes. The throughfall and moisture entering the soil (MES) had the largest proportions (79.50 % and 60.25 %) in the initial and second distributions of atmospheric rainfall, respectively. With the increase in restoration age, the content of soil total nitrogen (STN), soil nitrate nitrogen (SNN), soil soluble total nitrogen (SSTN), soil soluble organic nitrogen (SSON), and soil soluble inorganic nitrogen (SSIN) all increased with restoration age in the upper soil (0–40 cm), fluctuated in the middle soil (40–100 cm), and increased and then decreased in the deeper soil (100–200 cm). In addition, the vegetation restoration process can indirectly affect soil nitrogen content and distribution patterns by affecting the rainfall redistribution process. In the upper soil, litter interception (LI) had a significant effect on STN by affecting SSIN and SSON. In the middle soil, both LI and MES had significant effects on STN through SSIN and SSON, respectively. In the deeper soil, LI had no significant effect on any nitrogen component, whereas MES had a significant effect on STN by affecting SSIN. Overall, this study indicates that RP plantation restoration has the potential to transform rainfall redistribution and soil nitrogen distribution, providing an important reference for the reciprocal feedback relationship between water and nitrogen.