Manganese oxides are widely utilized in aqueous aluminum-ion batteries (AIBs) due to their high voltage and diverse crystal structures. However, the Jahn-Teller effect induced by Mn-O6 units results in irreversible structural damage. Here, we synthesized ZnMn1.75O4 (ZMO) cathodes loaded onto a carbon framework with manganese vacancies (VMn) for AIBs through ion substitution, manganese extraction, and carbonization on Mn-MIL. VMn stabilizes the ZMO structure by damping Mn-O bond vibrations and fosters Mn-O-C bonds between oxide particles and the carbon framework, effectively suppressing irreversible Mn2+ dissolution. Vacancy-modified cathodes provide more ion insertion sites, promoting ion diffusion. Ex-situ characterization revealed dominant H+ and Al3+ insertion behavior during different voltage regimes. Upon initial discharge, ion insertion into vacant lattice sites causes lattice distortions in adjacent unit cells, prompting ZMO to undergo a crystal structure transition and partial zinc deintercalation, resulting in a more stable cathode structure. Therefore, Al/ZMO batteries exhibit enhanced electrochemical performance.