Abstract The incremental construction of plutons characterises magmatic activity in arc settings, where new continental crust is produced. This polyphasic growth entails interactions with one or more crustal components, which modulate the geochemical and isotopic compositions of the newly formed crust. However, the early stages of magmatism are not always preserved due to obliteration by later magmatic pulses. Spatial migration of magmatism during the construction of the Adamello batholith (Northern Italy) enables the examination of the early pulses of pluton formation, thus allowing a time-integrated study of the relative importance of crystallisation-differentiation and contamination in a continental arc setting. We conducted a detailed textural, major and trace element and Sr isotopic study of plagioclase from the first intrusive pulses of the Adamello batholith, combined with new major, trace element and Sr–Nd isotopic analyses of bulk rock samples across the entire Adamello batholith. We selected well-characterised samples with published CA-ID-TIMS 206Pb-238U ages and Hf isotopic composition for zircons. Strontium isotopes in plagioclase from the same samples were determined by laser ablation multi-collector ICP-MS. The tonalitic samples in the early magmatic stages show elevated but constant Sr isotopic compositions despite large variations in anorthite contents (An90 to An13), indicating that crustal contamination occurred before significant differentiation. Invariant bulk-rock 87Sr/86Sr with variable SiO2 in all superunits of the Adamello batholith further supports contamination preceding significant melt differentiation. Contamination by lower crustal basement lithologies is due to the increasing thermal anomaly triggered by consecutive magmatic injections coupled with the heterogeneous and less restitic nature of the basement in the early stage of the magmatic system (i.e., before consumption of fusible components). In addition, we observe significant variability in crustal contamination proxies (e.g., 87Sr/86Srplag, 87Sr/86Srbulk, εNdbulk, εHfzircon) during the initial phases of magmatism. This variability likely reflects the uneven distribution of positive thermal anomalies in the lower crust during early magmatic stages as well as the diverse lithological and isotopic makeup of the lower crust. The processes identified in our case study are pertinent to continental arc magmatism, particularly where magmas interact with a metapelitic lower crust.