Broad Geographic Range Research Articles

Ulva blooms in the southwestern Gulf of California: Reproduction and biomass

Ulvacean blooms are generally characterized by one or more Ulva species, some of which are common to blooms across a broad geographic range. In tropical environments the identified stimuli that induce reproductive development of Ulva are restricted to temperature, salinity, dehydration and fragmentation. Culture studies have been prolific in describing the reproduction of Ulva species, but its reproductive changes in natural environment have not been described yet. Hence, seasonal changes were described in reproductive stages and their relationship with biomass and environmental factors of Ulva species at four macroalgal blooms in a subtropical bay. Eight Ulva species were found: U. acanthophora, U. clathrata, U. flexuosa, U. intestinalis, U. lactuca, U. lobata, U. nematoidea and U. rigida. Reproductive stage and biomass varied according to site and season. Five species showed four reproductive stages (vegetative, thallus with fully differentiated zooids in formation and empty cells after zooids release); for the remaining species only vegetative thalli were found. Ulva rigida showed the highest biomass values, followed by U. acanthophora, following a seasonal pattern.

Contrasting phylogeography of two Western Palaearctic fish parasites despite similar life cycles

AbstractAimWe used comparative phylogeography of two intestinal parasites of freshwater fish to test whether similarity in life cycle translates into concordant phylogeographical history. The thorny‐headed worms Pomphorhynchus laevis and P. tereticollis (Acanthocephala) were formerly considered as a single species with a broad geographical and host range within the Western Palaearctic.LocationCentral and eastern parts of Northern Mediterranean area, Western and Central Europe, Ponto‐Caspian Europe.MethodsA mitochondrial marker (COI) was sequenced for 111 P. laevis and 50 P. tereticollis individuals and nuclear ITS1 and ITS2 sequences were obtained for 37 P. laevis and 21 P. tereticollis. Genetic divergence, phylogenetic relationships and divergence time were estimated for various lineages within each species, and their phylogeographical patterns were compared to known palaeogeographical events in Western Palaearctic. Biogeographical histories of each species were inferred.ResultsThe two species show very different phylogeographical patterns. Five lineages were identified in P. laevis, partially matching several major biogeographical regions defined in the European riverine fish fauna. The early stages of P. laevis diversification occurred in the peri‐Mediterranean area, during the Late Miocene. Subsequent expansion across Western Europe and Russia was shaped by dispersal and vicariant events, from Middle Pliocene to Middle Pleistocene. By contrast, P. tereticollis has differentiated more recently within the Western and Central parts of Europe, and shows weak geographical and genetic structuring.ConclusionOur study highlights weak to moderate similarity in the phylogeographical pattern of these acanthocephalan parasites compared to their amphipod and fish hosts. The observed differences in the timing of dispersion and migration routes taken may reflect the use of a range of final hosts with different ecologies and dispersal capabilities. By using a group underrepresented in phylogeographical studies, our study is a valuable contribution to revealing the biogeography of host–parasite interactions in continental freshwaters.

Hospital-visiting pregnant women signal an increased spread of hepatitis C infection in Khyber Pakhtunkhwa region of Pakistan

BackgroundSeroprevalence of hepatitis C in Khyber Pakhtunkhwa province of Pakistan was determined by screening blood samples of expectant mothers seeking antenatal care in gynecological units of district hospitals. The rationale behind this cohort study was that the availability of free-of-cost antenatal care in district hospitals brings expectant mothers from a broader geographical range in each district and thus provides a large sample-size of healthy pregnant women of known medical history for Hepatitis C Virus (HCV) surveillance. The study was carried out along a south west to north east transact of five districts, Kohat-Peshawar-Nowshera-Charsadda-Mardan, with the central district Peshawar and outer districts Kohat and Mardan bordering northern mountainous ranges of the Khyber Pakhtunkhwa province. This distribution of districts along the transact allowed the study to gauge the impact of proximity to remote highland communities on the HCV burden of visiting pregnant women tested for HCV infection.MethodsThe cohort study randomly selected 150 pregnant women visiting each hospital for serological screening for Anti-HCV carried out by ELISA assay. The feasibility of ICT and RT-PCR assays for HCV prevalence was also examined in the present study.ResultsWith a total of 750 blood specimen screened, the results of ELISA tests revealed a staggering 5.9% frequency of Anti-HCV in the five districts with the frequency of ELISA positive cases ranging from 3.3% in Nowshera, 4.7% in Charsadda, 6.0% in Peshawar, 6.7% in Kohat, and 8.7% in Mardan. The relatively higher frequencies of Anti-HCV cases among hospital visiting pregnant women in Peshawar, Kohat and Mardan were consistent with the proximity of these hospitals to the highland communities in the bordering mountain ranges. Compared to 44 Anti-HCV positive serologic specimens detected by ELISA, only 26 and 10 blood specimens were tested positive by ICT and PCR methods, respectively. Our study validates ELISA as a reliable diagnostic technique for both acute and chronic HCV infection.ConclusionThe HCV infection rate of 5.9% in Khyber Pakhtunkhwa province clearly exceeds the HCV prevalence rates reported for other regions in Pakistan, making this province a hotspot of HCV infection in the country.

Pattern of ovulation in an ancient, solitary mole-rat lineage:Heliophobius argenteocinereus eminifrom Tanzania

The genus Heliophobius Peters, 1846 is an ancient subterranean rodent lineage within the family Bathyergidae that displays seasonal breeding over a broad geographical range. In East Africa, reproduction in these solitary mole-rats has been shown to coincide with the long rains, but it is not clear whether the silvery mole-rat subspecies Heliophobius argenteocinereus emini Noack, 1894 from Tanzania is an induced or spontaneous ovulator. To address this, urinary progesterone was measured every second day over a period of 132 days in six wild-caught females subjected to three sequential experimental treatments. In the first, control (C) treatment, females were housed singly for a period of 44 days, following which nonphysical contact (NPC) with a vasectomised male and then physical contact (PC) with the same vasectomised male occurred in each of the subsequent 44-day treatments. Noninvasive monitoring of ovarian cyclicity confirmed that mean urinary progesterone concentration was higher during PC than during either NPC or C, despite the fact that the males were vasectomised and incapable of fertilising the females. Examination of penile morphology revealed that males possess epidermal projections on the glans penis, which probably bring about cervical stimulation during coitus. These findings together with the female progesterone profiles imply the species is an induced ovulator stimulated by penile intromission.

Variation in the ecstatic display call of the Gentoo Penguin (Pygoscelis papua) across regional geographic scales

ABSTRACT Geographic variation in bird vocalizations is common and has been associated with genetic differences and speciation, as well as with short-term changes in response to anthropogenic noise. Because vocalizations are used for individual recognition in many species, geographic variation in these traits may affect mate choice, pair bonding, and territory defense. Anecdotal evidence suggests the existence of geographic variation in vocalizations between isolated populations of Gentoo Penguins (Pygoscelis papua), but there have been no comprehensive studies of Gentoo Penguin vocalizations across a broad geographic range. We used acoustic recordings of ambient colony sound at 22 breeding colonies in the Antarctic Peninsula and South Shetland Islands, South Georgia, the Falkland Islands, and Argentina to address 2 main questions regarding Gentoo Penguin vocalizations: (1) How do ecstatic display calls vary both within and between individuals, colonies, and regions? (2) Can ecstatic display calls be used ...

Population Genetics ofOligonychus perseae(Acari: Tetranychidae) Collected from Avocados in Mexico and California

Oligonychus perseae Tuttle, Baker & Abbatiello (Acari: Tetranychidae) is an economically important foliar pest of avocados from Mexico. Invasive O. perseae populations became established throughout the commercial avocado system in California (USA) during the early 1990s, but the putative geographic origin(s) of the California O. perseae populations has not been investigated. To address this shortcoming, a series of population genetic analyses for O. perseae populations representative of a broad geographic sample range was conducted. This study identified a single mitochondrial cytochrome c oxidase subunit I (COI) haplotype match between O. perseae populations collected in California with those from 4 municipalities in Michoacan, Mexico, part of the presumptive native range of this pest. Interestingly, this haplotype also was collected from avocados at 2 locations in Baja California, Mexico, and it was identified from a representative sample from Israel where O. perseae is an invasive avocado pest. Molecular data confirm the likely Mexican origin of invasive O. perseae populations in California, and may help delimit the geographic area to be searched for coevolved natural enemies of O. perseae that could be introduced into California as part of a future classical biological control program targeting this pest. Moreover, molecular results uncovered significant and concordant genetic divergence in both mitochondrial (COI) and ribosomal DNA markers, i.e.,internal transcribed spacer 2 (ITS2) and a section of the 28S gene region, pointing to the potential occurrence of a cryptic species complex within O. perseae. The implications of these findings on future taxonomic and molecular work for O. perseae are discussed.

Proteomic response of bacteria during the interaction with a host cell in a model of Mycoplasma gallisepticum

Parasitism, which is a way of the coexistence of bacteria with a host, is a very interesting phenomenon. Although the pathogenicity of many microorganisms has been studied in detail, many aspects of this phenomenon remain poorly understood for most bacteria. Among interesting objects for studying pathogen–host interactions are the members of the Mycoplasma genus. Despite a very broad geographical range of habitat of these bacteria, their pathogenicity has been poorly studied. Almost all living beings are the hosts of mycoplasmas, and the reduced genome of these microorganisms makes them a convenient object for model studies. Here, we have described for the first time an experimental label-free method for the analysis of the protein profile of a bacterium immediately during its interaction with a host cell, which made it possible to understand what changes the pathogen undergoes at this stage of infection. The method involves the sampling of eukaryotic cells at different times of cultivation with the pathogen, the sedimentation of infected cells, the preparation of a cell lysate, the hydrolytic cleavage of cell proteins, and their identification by mass spectrometry (HPLC–MS). Changes in the protein abundance were analyzed by the method of multiple reaction monitoring (MRM). In the present work, a model of the interaction of the bacterium Mycoplasma gallisepticum with chicken erythroblasts (HD3 cells) at the stage of acute infection was studied. A panel of 100 proteins was taken for the analysis, which were chosen based on their functions and literature data. To obtain the greatest number of identified proteins, several methods of their hydrolytic cleavage with subsequent preparation of the peptide extract were used: digestion in solution using the RapiGest SF surfactant, digestion using sodium deoxycholate and urea, and the digestion of proteins in gel. As a result, proteins were identified that, probably, are involved in the interaction of M. gallisepticum with the host cell at early infection stages; most of them were the proteins of adhesion, glycolysis, and ribosomal proteins.

Coaction of individual and environmental factors: a review of intensive therapy paradigms for children with unilateral spastic cerebral palsy

Considerable variability exists in how children with unilateral spastic cerebral palsy respond to intensive upper extremity therapies. Individual and environmental factors interact to shape responsiveness.

Pre-nesting Movements of Leatherback Sea Turtles, Dermochelys coriacea, in the Western Atlantic

Understanding high-use areas for highly migratory species and their movements within these areas may provide insight into behaviours such as foraging and mating. In the Western Atlantic, the leatherback sea turtle, Demochelys coriacea, has a broad geographic range extending from nesting beaches at low latitudes to foraging areas off the coast of Eastern Canada. Biotelemetry has revealed much about the movements and habitats of leatherbacks. However, the timing and location of leatherback mating behaviour remains unclear. We conducted spatial analyses of the movements of reproductive female leatherbacks prior to their first seasonal nesting events. Using kernel density estimates, high-use areas for seven female turtles originally tagged in Canadian waters were revealed from 50% volume contours depicting pre-nesting movements (120 days prior to confirmed nesting events) and inferred mating behaviour (45 days prior to confirmed nesting events). All individuals initially remained offshore within a relatively small range of latitude (10-15o N) before transiting and residing in coastal waters adjacent to nesting beaches in Colombia (n=2), Trinidad (n=3), Guyana (n=1) and French Guiana (n=1). Comparison of these movement patterns to those of mature male leatherbacks (n=12) revealed similarities. Male and female residency within this offshore high-use area may be indicative of prey exploitation prior to the energetically costly nesting season. While the offshore residency period of three males and one female extended into the interval in which mating is expected to occur, most males and females transited to coastal waters where they resided throughout this period. High-use areas determined through kernel density analysis support and corroborate previous telemetry work indicating that mature male leatherbacks exhibit seasonal residency adjacent nesting beaches for the early portion of the nesting season, presumably to exploit mating opportunities. Fine-scale analyses of fisheries interactions in both coastal and offshore waters and estimation of accompanying mortality rates is required to evaluate fishery threats on this population during the pre-nesting interval.

Latitudinal Clines in Temperature and Salinity Tolerance in Tidepool Copepods

Local adaptation has been understudied in marine systems, but might be expected to be pronounced in the tidepool copepod Tigriopus californicus, which has a broad geographic range and extremely restricted dispersal. Tolerance to temperature and salinity was assessed in 14 populations over a 20° latitudinal range. Adaptive differentiation to temperature and salinity was found at scales as low as 5.6 km. Latitudinal clines were significant, with northern populations being more tolerant of low salinity and less tolerant of high temperature and high salinity. Both temperature and salinity tolerance were more closely associated with long-term thermal maxima than with long-term precipitation data. Hyperthermal and hyposmotic tolerance were inversely correlated, a pattern that could potentially slow adaptation to future conditions. Together, these studies of intraspecific geographic patterns in resistance to multiple stressors are important in predicting how environmental change may effect range shifts and local extinctions.

Interseasonal variation of Chrysodeixis includens (Walker, [1858]) (Lepidoptera: Noctuidae) populations in the Brazilian Savanna

Chrysodeixis includens (Walker, [1858]) is currently the main plusiine pest in the Americas, not only because of the damage caused to soybean, but also with several crop species in a broad geographical range. However, its population dynamics is still poorly understood, despite outbreak records that are common across different locations in the Americas. The current study aimed at identifying phenological patterns of C. includens emphasizing its differences among the three years of sampling effort in an intercropping area of the Brazilian Savanna. Thereafter, we tested whether the El Niño size effect, meteorological factors, or soybean, corn and wheat cycles, are better predictors of its monthly abundance. The insects were collected with a light trap during five consecutive nights (repetitions) during 35 new moons. In total, 2026 specimens were collected in all months of the year although not consecutively. Across each year, monthly abundance of C. includens was non-uniform, characterized by sharp population peaks concentrated in the rainy season. These peaks varied from January until March, depending on the year sampled. We found that the local soybean cycle and El Niño effect to significantly influence the species abundance across the entire period of study. These results aid in understanding the species population dynamics and its status as a pest, providing evidence of factors that determine its phenological patterns. Although it presents a very defined phenology, the population dynamics of C. includens varies significantly between years and locations, which demonstrates the importance and need to monitor local populations of larvae and adults for its management.

Locomotor performance of cane toads differs between native-range and invasive populations

Invasive species provide a robust opportunity to evaluate how animals deal with novel environmental challenges. Shifts in locomotor performance—and thus the ability to disperse—(and especially, the degree to which it is constrained by thermal and hydric extremes) are of special importance, because they might affect the rate that an invader can spread. We studied cane toads (Rhinella marina) across a broad geographical range: two populations within the species' native range in Brazil, two invasive populations on the island of Hawai'i and eight invasive populations encompassing the eastern, western and southern limits of the toad invasion in Australia. A toad's locomotor performance on a circular raceway was strongly affected by both its temperature and its hydration state, but the nature and magnitude of those constraints differed across populations. In their native range, cane toads exhibited relatively low performance (even under optimal test conditions) and a rapid decrease in performance at lower temperatures and hydration levels. At the other extreme, performance was high in toads from southern Australia, and virtually unaffected by desiccation. Hawai'ian toads broadly resembled their Brazilian conspecifics, plausibly reflecting similar climatic conditions. The invasion of Australia has been accompanied by a dramatic enhancement in the toads' locomotor abilities, and (in some populations) by an ability to maintain locomotor performance even when the animal is cold and/or dehydrated. The geographical divergences in performance among cane toad populations graphically attest to the adaptability of invasive species in the face of novel abiotic challenges.

Signatures of adaptive molecular evolution in American pikas (Ochotona princeps)

The American pika (Ochotona princeps) is a small, winter-active mammal inhabiting alpine environments. For alpine mammals, metabolic heat production and cellular mechanisms to cope with hypoxia are critical for survival and reproduction. Thus, because of the pikas' long association with alpine environments, they may have genetically adapted to alpine conditions. Here, we present evidence for positive selection acting at 2 loci within the Ochotona genome. These loci were identified by first assembling a list of 50 candidate genes and collecting sequence data from 2 O. princeps draft genomes available from public databases. We then tested the possibility that positive selection acted on the Ochotona lineage, relative to other mammalian species, using the CODEML program in the PAML package. These analyses indicated positive selection at 4 loci—insulin-like growth factor 1 gene (IGF-1), enoyl-CoA hydratase/3-hydroxyacyl CoA dehydrogenase (EHHADH), inducible nitric oxide synthase 2 (NOS2), and transforming growth factor beta 1 gene (TGF-β1). To test this assumption further, we collected DNA sequence data from the 4 genes of interest from multiple O. princeps individuals across a broad geographic range, as well as individuals from the congeneric collared pika (O. collaris). We used multiple interspecific and intraspecific polymorphism-based tests to test the resulting sequence data for patterns of non-neutral evolution. These tests provide additional support for positive selection acting on the IGF-1 and EHHADH loci.

Studies on Amyloodinium Infestation in European Seabass ( Dicentrarchus labrax. ) Fishes with Special Reference for Treatment

Amyloodinium ocellatum, adinoflagellate which causes one of the most serious diseases of warm water marine aquaculture. The parasite produces a powdery or velvety appearance on infected fish, and the resulting disease is commonly referred to as “marine velvet,” velvet disease, or Amyloodiniosis . The organism is a dinoflagellate ectoparasite and has been reported in a wide range of marine and estuarine fish. It is one of a very few organisms that can infect both teleosts and elasmobranchs (Alvarez-Pellitero, 2008) . This makes it a concern for public aquaria. This ectoparasite can be found on gills and skin (body and fins) of host fish. It can cause devastating disease and mortality because the organism is able to reproduce quickly when fish are crowded, especially in closed systems. This parasite has a broad host and geographic range, causing fish mortalities in tropical and temperate environments. Rapid spread of the parasite and high mortality are common in cultured fish if the organism is not recognized and treated early in the course of an outbreak. One of the most important of the ectoparasitic protozoaisIn this respect, the present study was aimed to investigate the occurrence of Amyloodiniosis among cultured European seabass ( Dicentrarchus labrax L.; Moronidae; Perciformes ) fishes. This work was carried out on 1065 European seabass fishes of diffrerent life stages (546 fry-222 fingerling and 78 adults) which were collected in different seasons of the year. Cultured fish were collected from different marine farms in Egypt during the period from April 2015 to April 2016 and subjected to full clinical parasitological and histopathological examination studying the environmental stressors surrounding examined fish and their association with A.ocellatum i nfestation Study the ecological factors affects Amyloodiniosis. As well as examining the antiseptic activity of hydrogen peroxide against the ectoparasitic protozoan A.ocellatum as a trial for treatment.

Loop‐mediated isothermal amplification (LAMP) assays for rapid detection of Pyrenopeziza brassicae (light leaf spot of brassicas)

Pyrenopeziza brassicae (anamorph Cylindrosporium concentricum) is an ascomycete fungus that causes light leaf spot (LLS) disease of brassicas. It has recently become the most important pathogen of winter oilseed rape (Brassica napus) crops in the UK. The pathogen is spread by both asexual splash‐dispersed conidia and sexual wind‐dispersed ascospores. Such inoculum can be detected with existing qualitative and quantitative PCR diagnostics, but these require time‐consuming laboratory‐based processing. This study describes two loop‐mediated isothermal amplification (LAMP) assays, targeting internal transcribed spacer (ITS) or β‐tubulin DNA sequences, for fast and specific detection of P. brassicae isolates from a broad geographical range (throughout Europe and Oceania) and multiple brassica host species (B. napus, B. oleracea and B. rapa). Neither assay detected closely related Oculimacula or Rhynchosporium isolates, or other commonly occurring oilseed rape fungal pathogens. Both LAMP assays could consistently detect DNA amounts equivalent to 100 P. brassicae conidia per sample within 30 minutes, although the β‐tubulin assay was more rapid. Reproducible standard curves were obtained using a P. brassicae DNA dilution series (100 ng–10 pg), enabling quantitative estimation of amounts of pathogen DNA in environmental samples. In planta application of the β‐tubulin sequence‐based LAMP assay to individual oilseed rape leaves collected from the field found no statistically significant difference in the amount of pathogen DNA present in parts of leaves either with or without visible LLS symptoms. The P. brassicae LAMP assays described here could have multiple applications, including detection of symptomless host infection and automated real‐time monitoring of pathogen inoculum.

Fast diffusion of domesticated maize to temperate zones

Adaptation to a temperate climate was a prerequisite for the spread of maize across a broad geographical range. To explicitly explore the demographic process underlying maize adaptation, we used a diffusion-based method to model the differentiation between temperate and tropical populations using the Non-Stiff Stalk group as a proxy for temperate maize. Based on multiple sequential Markovian coalescent approaches, we estimate that tropical and temperate maize diverged approximately 3‚000 to 5‚000 years ago and the population size shrank after the split. Using composite likelihood approaches, we identified a distinct tropical-temperate divergence event initiated 4‚958 years ago (95% confidence interval (CI): 4‚877–5‚039) from an ancestral population whose effective size was 24,162 (95% CI: 23,914–24,409). We found that continuous gene flow between tropical and temperate maize accompanied the differentiation of temperate maize. Long identical-by-descent tracts shared by tropical and temperate inbred lines have been identified, which might be the result of gene flow between tropical and temperate maize or artificial selection during domestication and crop improvement. Understanding the demographic history of maize diffusion not only provides evidence for population dynamics of maize, but will also assist the identification of regions under selection and the genetic basis of complex traits of agronomic importance.

Frequent heteroplasmy and recombination in the mitochondrial genomes of the basidiomycete mushroom Thelephora ganbajun

In the majority of sexual eukaryotes, the mitochondrial genomes are inherited uniparentally. As a result, individual organisms are homoplasmic, containing mitochondrial DNA (mtDNA) from a single parent. Here we analyzed the mitochondrial genotypes in Clade I of the gourmet mushroom Thelephora ganbajun from its broad geographic distribution range. A total of 299 isolates from 28 geographic locations were sequenced at three mitochondrial loci: the mitochondrial small ribosomal RNA gene, and the cytochrome c oxidase subunits I (COX1) and III (COX3) genes. Quantitative PCR analyses showed that the strains had about 60–160 copies of mitochondrial genomes per cell. Interestingly, while no evidence of heteroplasmy was found at the 12S rRNA gene, 262 of the 299 isolates had clear evidence of heterogeneity at either the COX1 (261 isolates) or COX3 (12 isolates) gene fragments. The COX1 heteroplasmy was characterized by two types of introns residing at different sites of the same region and at different frequencies among the isolates. Allelic association analyses of the observed mitochondrial polymorphic nucleotide sites suggest that mtDNA recombination is common in natural populations of this fungus. Our results contrast the prevailing view that heteroplasmy, if exists, is only transient in basidiomycete fungi.

Characteristics of Golden-winged Warbler territories in plant communities associated with regenerating forest and abandoned agricultural fields

In the Appalachian portion of their breeding range, Golden-winged Warblers (Vermivora chrysoptera) nest in shrubland and regenerating forest communities created and maintained by disturbance. Because populations of Golden-winged Warblers have exhibited precipitous declines in population throughout their Appalachian breeding range, management activities that create or maintain early successional habitat are a priority for many natural resource agencies and their conservation partners. Within these early successional habitats, however, additional information is still needed concerning the relative importance of different vegetation features in selection of breeding territories by Golden-winged Warblers. Our objective, therefore, was to use logistic regression to estimate the probability of territory-level occupancy by Golden-winged Warblers in north-central Pennsylvania at two sites, each with its own early successional community, based on vegetation characteristics. Our communities were composed of shrublands and regenerating forest sites resulting from two disturbances: agriculture and forest fire. Despite differences in vegetation structure, portions of both study areas (regenerating forest and old field) supported territorial Golden-winged Warblers. Probability of territory occupancy by Golden-winged Warblers increased with percent blackberry (Rubus) cover in the regenerating forest community, and decreased as basal area and distance to microedge increased (i.e., as vegetation patchiness decreased) in both communities. These habitat features have also been found to influence other aspects of Golden-winged Warbler breeding ecology such as nest-site selection, pairing success, and territory abundance. Vegetation features influencing Golden-winged Warbler territory establishment can differ among shrubland and regenerating forest communities, and management decisions and outcomes may be affected by these differences. Our study provides a starting point for a more comprehensive hypothesis-driven occupancy survey to investigate features of the territories of Golden-winged Warblers across a broader geographic range and in different vegetation communities.

Strong population structure in a species manipulated by humans since the Neolithic: the European fallow deer (Dama dama dama)

Species that have been translocated and otherwise manipulated by humans may show patterns of population structure that reflect those interactions. At the same time, natural processes shape populations, including behavioural characteristics like dispersal potential and breeding system. In Europe, a key factor is the geography and history of climate change through the Pleistocene. During glacial maxima throughout that period, species in Europe with temperate distributions were forced south, becoming distributed among the isolated peninsulas represented by Anatolia, Italy and Iberia. Understanding modern patterns of diversity depends on understanding these historical population dynamics. Traditionally, European fallow deer (Dama dama dama) are thought to have been restricted to refugia in Anatolia and possibly Sicily and the Balkans. However, the distribution of this species was also greatly influenced by human-mediated translocations. We focus on fallow deer to better understand the relative influence of these natural and anthropogenic processes. We compared modern fallow deer putative populations across a broad geographic range using microsatellite and mitochondrial DNA loci. The results revealed highly insular populations, depauperate of genetic variation and significantly differentiated from each other. This is consistent with the expectations of drift acting on populations founded by small numbers of individuals, and reflects known founder populations in the north. However, there was also evidence for differentiation among (but not within) physically isolated regions in the south, including Iberia. In those regions we find evidence for a stronger influence from natural processes than may be expected for a species with such strong, known anthropogenic influence.

Nesting habits influence population genetic structure of a bee living in anthropogenic disturbance.

While most organisms are negatively affected by anthropogenic disturbance, a few species thrive in landscapes altered by humans. Typically, native bees are negatively impacted by anthropogenic environmental change, including habitat alteration and climate change. Here, we investigate the population structure of the eastern carpenter bee Xylocopa virginica, a generalist pollinator with a broad geographic range spanning eastern North America. Eastern carpenter bees now nest almost exclusively in artificial wooden structures, linking their geographic distribution and population structure to human activities and disturbance. To investigate the population structure of these bees, we sampled females from 16 different populations from across their range. Nine species-specific microsatellite loci showed that almost all populations are genetically distinct, but with high levels of genetic diversity and low levels of inbreeding overall. Broadly speaking, populations clustered into three distinct genetic groups: a northern group, a western group and a core group. The northern group had low effective population sizes, decreased genetic variability and the highest levels of inbreeding in the data set, suggesting that carpenter bees may be expanding their range northward. The western group was genetically distinct, but lacked signals of a recent range expansion. Climatic data showed that summer and winter temperatures explained a significant amount of the genetic differentiation seen among populations, while precipitation did not. Our results indicate that X.virginica may be one of the rare 'anthrophilic' species that thrive in the face of anthropogenic disturbance.