This paper investigates the long-time behavior of fractional-order complex memristive neural networks in order to analyze the synchronization of both anatomical and functional brain networks, for predicting therapy response, and ensuring safe diagnostic and treatments of neurological disorder (such as epilepsy, Alzheimer’s disease, or Parkinson’s disease). A new mathematical brain connectivity model, taking into account the memory characteristics of neurons and their past history, the heterogeneity of brain tissue, and the local anisotropy of cell diffusion, is proposed. This developed model, which depends on topology, interactions, and local dynamics, is a set of coupled nonlinear Caputo fractional reaction–diffusion equations, in the shape of a fractional-order ODE coupled with a set of time fractional-order PDEs, interacting via an asymmetric complex network. In order to introduce into the model the connection structure between neurons (or brain regions), the graph theory, in which the discrete Laplacian matrix of the communication graph plays a fundamental role, is considered. The existence of an absorbing set in state spaces for system is discussed, and then the dissipative dynamics result, with absorbing sets, is proved. Finally, some Mittag–Leffler synchronization results are established for this complex memristive neural network under certain threshold values of coupling forces, memristive weight coefficients, and diffusion coefficients.