Identifying which factors among the planetary boundary layer (PBL) scheme, grid resolution, and source or sink terms dominantly influence the sea salt aerosol (SSA) spatial distribution is necessary. The dependence of SSA transport on PBL processes was investigated using a numerical weather prediction (NWP) model with a grid scale of ∼143 m. Size-segregated SSA transport during Typhoon Hagibis, which made landfall in Japan in 2019, was simulated using the Weather Research and Forecasting (WRF) model. The PBL schemes of Yonsei University (YSU), scale-aware YSU (Shin and Hong, 2015's scheme, SH) and Mellor-Yamada Nakanishi-Niino (MYNN), and large-eddy simulation (LES) subjected to turbulence transition enhancement via a cell perturbation method were tested to evaluate the reproducibility of observed values of wind speed, surface pressure, relative humidity, and temperature at meteorology masts. The results showed that wind speed was most influenced by the selection of the PBL scheme and LES. The distance from the coastline, as determined by the wind direction during the most intense typhoon stage, was correlated with a decrease in the time averaged SSA concentration when the storm moved inland. Despite the simulated SSA emission scheme's high sensitivity to wind speed (nearly 3rd power), the near-surface average concentration was less sensitive to the PBL schemes and LES selection than wind speed. However, the maximum arrival of the SSA differed by ∼20 % during the most vigorous stage of the typhoon. Budget analysis of the SSA transport equation highlighted that the advection term and gravity settling were most dependent on the PBL schemes and LES. The impacts of both factors on SSA transport were not limited to near-surface tendencies but were in a broader range over the atmosphere, up to 1–2 km. These results indicated that the vertical structure of the SSA field over the boundary layer depended on the PBL schemes and LES, thereby modulating the inland arrival of the SSA.