Let $\tilde f\colon(S^2,\tilde A)\to(S^2,\tilde A)$ be a Thurston map and let $M(\tilde f)$ be its mapping class biset: isotopy classes rel $\tilde A$ of maps obtained by pre- and post-composing $\tilde f$ by the mapping class group of $(S^2,\tilde A)$. Let $A\subseteq\tilde A$ be an $\tilde f$-invariant subset, and let $f\colon(S^2,A)\to(S^2,A)$ be the induced map. We give an analogue of the Birman short exact sequence: just as the mapping class group $\mathrm{Mod}(S^2,\tilde A)$ is an iterated extension of $\mathrm{Mod}(S^2,A)$ by fundamental groups of punctured spheres, $M(\tilde f)$ is an iterated extension of $M(f)$ by the dynamical biset of $f$. Thurston equivalence of Thurston maps classically reduces to a conjugacy problem in mapping class bisets. Our short exact sequence of mapping class allows us to reduce in polynomial time the conjugacy problem in $M(\tilde f)$ to that in $M(f)$. In case $\tilde f$ is geometric (either expanding or doubly covered by a hyperbolic torus endomorphism) we show that the dynamical biset $B(f)$ together with a portrait of bisets induced by $\tilde A$ is a complete conjugacy invariant of $\tilde f$. Along the way, we give a complete description of of $(2,2,2,2)$-maps as a crossed product of of torus endomorphisms by the cyclic group of order $2$, and we show that non-cyclic orbisphere have no automorphism. We finally give explicit, efficient algorithms that solve the conjugacy and centralizer problems for of expanding or torus maps.