Facets Of Biodiversity Research Articles

Chronic anthropogenic disturbance mediates the biodiversity‐productivity relationship across stand ages in a large temperate forest region

Abstract Temperate forests, especially those in the densely populated regions of the world, are experiencing increasing levels of habitat degradation and biological impoverishment due to subtle but pervasive chronic anthropogenic disturbances including frequent and continuous grazing and extraction of non‐timber forest products. However, the effects of these subtle, chronic disturbances on the biodiversity‐productivity relationship have rarely been examined especially in forests at different development stages. Accordingly, this study explores how chronic anthropogenic disturbance affects the relationship between tree species diversity and forest productivity at different stand development stages in a large temperate forest region. We used the human footprint index as a proxy for chronic human disturbance. Hierarchical Bayesian models were employed to assess the effects of chronic human disturbance on the relationship between tree diversity and forest productivity across different stand age. Several measures of diversity were employed, including taxonomic, functional and phylogenetic diversity. Forest productivity consistently increased with taxonomic, functional and phylogenetic biodiversity; these biodiversity facets were the main drivers of forest productivity compared to stand age, chronic human disturbance and climate. However, the magnitude at which productivity increases with the increments of taxonomic and functional diversity diminishes with the increasing chronic disturbance, especially in younger stands. The effects of phylogenetic diversity on productivity did not vary with chronic disturbance, regardless of stand age. Synthesis and applications: Chronic human disturbance in a large temperate forest region reduces the increase in community productivity due to different facets of biodiversity, especially in young forests. The evidence suggests that the mitigation of chronic human disturbance and the conservation of biodiversity will be effective in sustaining essential ecosystem functions.

Altered litter stoichiometry drives energy dynamics of food webs through changing multiple facets of soil biodiversity

Global change in organismal stoichiometry and biodiversity is often correlated with energy dynamics in ecological networks that underpin the functioning of terrestrial ecosystems and services. However, we know little about which facets of biodiversity, such as taxonomic, functional, and phylogenetic diversity, account for most of the variation in the energy dynamics of ecological networks along litter stoichiometry gradients. Here, we quantified how multiple facets of biodiversity impact energy fluxes of soil food webs through time in agricultural fields incorporating litter from six plant species of varying C:N stoichiometry. We found that community biomass and energy flux in soil food webs decreased while community maintenance cost (i.e. energy flux to biomass ratio) increased with increasing litter C:N ratio. Taxonomic, functional, and phylogenetic diversity of soil nematodes declined along increasing litter C:N stoichiometry, and together explained 73 % and 51.3 % of variation in community biomass, 71.6 % and 49.2 % of variation in energy flux, and 59.8 % and 37.4 % of variation in community maintenance cost in early and later decomposition stages, respectively. Functional and taxonomic diversity were highly associated with energy dynamics in early decomposition stages, while phylogenetic diversity emerged as the central predictor in later decomposition stages. By identifying the crucial role of multi-faceted biodiversity conservation facilitated by low C:N litter in driving the energy dynamics of food webs, these findings shed new light on the applicability of energy dynamics for linking biodiversity and ecosystem functioning under global change scenarios.

Scales matter: regional environment factors affect α diversity but local factors affect β diversity of macroinvertebrates in Thousand Islands Lake catchment area

A more profound comprehension of various facets of biodiversity is essential for advancing sustainable governance of biodiversity and its associated ecosystem services. In this study, we delved into the composition of beta diversity within macroinvertebrates communities in the Thousand Islands Lake catchment area. Subsequently, we investigated the factors influencing the diverse facets of macroinvertebrates alpha and beta diversity, and ultimately employed structural equation modeling to analyze the pathways through which both regional environmental factors, like climate and land use, and local environmental variables collectively impact distinct facets of alpha and beta diversity within the ecosystem. Our results showed that (i) taxonomic and phylogenetic beta diversities were primarily determined by turnover, while functional beta diversity is predominantly determined by nestedness; (ii) alpha and beta diversity are primarily influenced by spatial variables, with local environment and climate ranking the second, and land use explaining the lowest proportion according to the results of variance partitioning; (iii) alpha diversity is mainly affected by regional variables, especially climatic factors (precipitation) while beta diversity is more affected by local variables, especially hydrological factors (depth) revealed by the structural equation modeling. These results offer compelling evidence that biodiversity composition, ecological drivers, and the specific pathways of influence vary across different scales. Future studies of macroinvertebrates could focus on different facets of alpha and beta diversity as well as consider the effects of environment variables at different scales, which would provide new insights into potential patterns of community associations.

Multifaceted patterns of diversity and co-occurrence along an extensive survey of shrubland communities across China

Interpreting biodiversity patterns and the underlying processes is crucial for evaluating the mechanisms of community assembly, but the view of multifaceted diversity patterns spanning broad spatial extents is less strengthened. We implemented an inventory of 1260 vegetation plots from shrublands across China with standardized methods and analyzed patterns of taxonomic and phylogenetic diversity with differential weighting of common and rare species, as well as phylogenetic co-occurrence structures. Taxonomic and phylogenetic diversity were linearly correlated when common and rare species were weighted equally, but had a logarithmic correlation when species were weighted with their relative abundances. While most shrubland communities were phylogenetically unstructured, the correlation between taxonomic and phylogenetic diversity covaried with phylogenetic relatedness when incorporating relative abundance, but only weakly so in phylogenetically over-dispersed communities. When we correlated patterns of taxonomic and phylogenetic diversity with different weightings for common versus rare species, we found an important role for geographic (e.g., longitude, altitude), climatic (temperature, precipitation) and soil factors. The importance of underlying variables varied between facets of diversity. We found a strong role for altitude in taxonomic, but less so for phylogenetic diversity. Furthermore, the importance of several environmental drivers varied depending on whether diversity metrics were strongly influenced by rare species or put more weight on common and/or dominant species. Overall, our assessment highlights the importance of synthetic analyses of patterns and processes of different facets of biodiversity to capture the full complexity of diversity in conservation studies.

Detecting benefits of protection level on diversity facets in a sea of temporal scarcity

Abstract The establishment of protected areas to face global diversity declines has mainly prioritized taxonomic diversity, leaving aside phylogenetic and functional diversities, which determine ecosystem functioning and resilience. Furthermore, the assessment of protected areas' effectiveness is mainly done using short‐duration surveys (<2 h), which may undermine the detection of rare species. Through a long‐duration video approach, reef fish taxonomic, phylogenetic and functional facets of diversity were assessed for 3 days within a fully protected area and a nearby poorly protected area in Mayotte Island (Western Indian Ocean). We found that temporally rare species contributed to more than 60% of the taxonomic facet and 85% of the functional facet of biodiversity found on each site. Those rare species, which harbour the most distinct trait values, also make reef fish diversity particularly vulnerable to their loss. Taxonomic, phylogenetic and functional richness were similar between the fully protected area and the poorly protected area, while the species, lineage and trait compositions were markedly different. These results pinpoint the importance of considering taxonomic, functional and phylogenetic dissimilarities while assessing protected areas' effectiveness, instead of using only richness. In addition, benefits of the fully protected area were detected only using more than 15 h of video survey, which emphasizes the importance of long‐duration remote approaches to capture the within‐ and between‐day temporal variations.

Intraspecific variability and species turnover drive variations in Collembola body size along a temperate-boreal elevation gradient

Investigating functional facets of biodiversity across elevation gradients provides the perspective to deepen understanding of the response of communities to global changes. Functional ecology approaches typically assume that filtering of traits across broad environmental gradients is largely due to species turnover rather than intraspecific trait variability. However, few studies quantified the relative importance of species turnover versus intraspecific variability for the composition of soil animal communities across environmental gradients. Here, for the first time, we investigated the relative contribution of species turnover, intraspecific trait variability and their covariation to changes in Collembola body size based on measurements at the individual level along a temperate-boreal elevation gradient in northeastern China. The results indicated that community weighted mean (CWM) body size of Collembola varied significantly with elevation as well as with life form, with the variations in CWM body size in total, epedaphic and hemiedaphic species being similar and more pronounced than in euedaphic Collembola. These variations in body size were driven to a similar extent by intraspecific trait variability and species turnover, with the former being somewhat higher in total, epedaphic and euedaphic but not in hemiedaphic Collembola. Further, variations in body size were better explained by local habitat-related soil factors than by temperature, but the relative importance of these factors differed among ecological groups of Collembola. Overall, these findings show that intraspecific variations in traits may be of similar importance than the turnover of species and needs closer consideration when using trait approaches to understand biodiversity – ecosystem functioning relationships in face of global change.

Evaluating the overlap of surface protected areas with different facets of groundwater biodiversity: Glass half empty or half full?

Biodiversity conservation across countries and ecosystems is traditionally based on a single species- or area-level attributes, such as endemicity or taxonomic diversity. Although alternative criteria integrating multiple biodiversity aspects on both species- and area-level have been proposed, they are only rarely considered in conservation planning, especially in data-deficient ecosystems. Among them are also groundwater ecosystems, which are almost exclusively protected only indirectly through protected areas (PAs) targeted at surface ecosystems. Due to their interdependency, surface PAs can be beneficial for groundwaters, but it is unclear whether and to what extent they capture different aspects of groundwater diversity. We addressed these questions at the subterranean biodiversity hotspot, the Western Balkans (Europe), using amphipod family Niphargidae as a model system. We integrated distributional, phylogenetic, and functional trait data for over 200 molecular operational taxonomic units (MOTU). We explored the patterns of different biodiversity facets and identified MOTUs and areas of highest conservation importance. We evaluated how well do PAs overlap with high-priority MOTUs and areas, and how much regional diversity PAs capture with their extent. Over a third of high-priority MOTUs were distributed outside PAs, while <30 % of high-priority areas had over half of the area overlapping with PAs. Additionally, we found that over 30 % high-priority MOTUs were formally undescribed species. Although existing PAs only poorly covered the high-priority MOTUs and areas, they still captured over 50 % of each diversity facet in the region. Finally, we list the next steps to improve the conservation strategies of groundwater ecosystems in Europe.

Influence of Ecological Multiparameters on Facets of β-Diversity of Freshwater Plankton Ciliates.

Understanding the relative importance of the factors that drive global patterns of biodiversity is among the major topics of ecological and biogeographic research. In freshwater bodies, spatial, temporal, abiotic, and biotic factors are important structurers of these ecosystems and can trigger distinct responses according to the facet of biodiversity considered. The objective was to evaluate how different facets of β-diversity (taxonomic, functional, and phylogenetic) based on data from the planktonic ciliate community of a Neotropical floodplain, are influenced by temporal, spatial, abiotic, and biotic factors. The research was conducted in the upper Paraná River floodplain between the years 2010 and 2020 in different water bodies. All predictors showed significant importance on the facets of β-diversity, except the abiotic predictors on species composition data, for the taxonomic facet. The functional and phylogenetic facets were mostly influenced by abiotic, biotic, and spatial factors. For temporal predictors, results showed influence on taxonomic (structure and composition data) and functional (structure data) facets. Also, a fraction of shared explanation between the temporal and abiotic components was observed for the distinct facets. Significant declines in β-diversity in continental ecosystems have been evidenced, especially those with drastic implications for ecosystemic services. Therefore, the preservation of a high level of diversity in water bodies, also involving phylogenetic and functional facets, should be a priority in conservation plans and goals, to ensure the maintenance of important ecological processes involving ciliates.

Functional diversity of sharks and rays is highly vulnerable and supported by unique species and locations worldwide

Elasmobranchs (sharks, rays and skates) are among the most threatened marine vertebrates, yet their global functional diversity remains largely unknown. Here, we use a trait dataset of >1000 species to assess elasmobranch functional diversity and compare it against other previously studied biodiversity facets (taxonomic and phylogenetic), to identify species- and spatial- conservation priorities. We show that threatened species encompass the full extent of functional space and disproportionately include functionally distinct species. Applying the conservation metric FUSE (Functionally Unique, Specialised, and Endangered) reveals that most top-ranking species differ from the top Evolutionarily Distinct and Globally Endangered (EDGE) list. Spatial analyses further show that elasmobranch functional richness is concentrated along continental shelves and around oceanic islands, with 18 distinguishable hotspots. These hotspots only marginally overlap with those of other biodiversity facets, reflecting a distinct spatial fingerprint of functional diversity. Elasmobranch biodiversity facets converge with fishing pressure along the coast of China, which emerges as a critical frontier in conservation. Meanwhile, several components of elasmobranch functional diversity fall in high seas and/or outside the global network of marine protected areas. Overall, our results highlight acute vulnerability of the world’s elasmobranchs’ functional diversity and reveal global priorities for elasmobranch functional biodiversity previously overlooked.

30×30 biodiversity gains rely on national coordination

Global commitments to protect 30% of land by 2030 present an opportunity to combat the biodiversity crisis, but reducing extinction risk will depend on where countries expand protection. Here, we explore a range of 30×30 conservation scenarios that vary what dimension of biodiversity is prioritized (taxonomic groups, species-at-risk, biodiversity facets) and how protection is coordinated (transnational, national, or regional approaches) to test which decisions influence our ability to capture biodiversity in spatial planning. Using Canada as a model nation, we evaluate how well each scenario captures biodiversity using scalable indicators while accounting for climate change, data bias, and uncertainty. We find that only 15% of all terrestrial vertebrates, plants, and butterflies (representing only 6.6% of species-at-risk) are adequately represented in existing protected land. However, a nationally coordinated approach to 30×30 could protect 65% of all species representing 40% of all species-at-risk. How protection is coordinated has the largest impact, with regional approaches protecting up to 38% fewer species and 65% fewer species-at-risk, while the choice of biodiversity incurs much smaller trade-offs. These results demonstrate the potential of 30×30 while highlighting the critical importance of biodiversity-informed national strategies.

Patterns of reef fish taxonomic and functional diversity in the Eastern Tropical Pacific

A core challenge in ecology is identifying the factors that determine species distribution and functional diversity of species assemblages. Reef fish are the most diverse group of vertebrates, form taxonomically rich and functionally diverse communities and represent a key source of food for humans. We examine regional distribution patterns of reef fish species richness and functional diversity and investigate how these are determined by historical, biogeographic, energetic, and anthropogenic factors. We compiled data from 3,312 underwater visual censuses performed at 122 locations comprising rocky and coral reefs along the Eastern Tropical Pacific (ETP). We used generalized linear mixed‐effects models (GLMMs) implemented in a Bayesian framework to investigate whether distance from quaternary refugia, distance from mainland, shelf area, primary productivity, sea surface temperature (SST), human population gravity, and conservation status influence reef fish species richness and functional diversity in the ETP. Species richness and functional richness (FRic) peaked towards the center of the ETP and our null model suggests that FRic followed a spatial pattern that would be predicted by species richness. Additionally, functional evenness (FEve) was highest at higher latitudes whereas functional dispersion (FDis) was homogeneous throughout the ETP. Species richness was negatively influenced by shelf area and distance from mainland, but positively influenced by SST and conservation status. FEve was influenced by human population gravity and FDis by shelf area. Reef fish species richness and functional diversity in the ETP exhibited a strong division within the region mainly mediated by SST and human population gravity. Our results also suggest that dominant species within small shelf areas share more common traits than dominant species in large areas. This study uncovers previously unknown regional patterns of reef fish functional diversity and provides new insights into how historical, biogeographic, energetic, and anthropogenic factors influence complementary biodiversity facets.

Alpha and beta diversity jointly drive the aboveground biomass in temperate and tropical forests.

Changes in biodiversity often affect ecosystem functioning. However, most previous biodiversity and ecosystem functioning (BEF) studies have generally been limited to very small spatial grains. Thus, knowledge regarding the biodiversity-ecosystem functioning relationships across spatial scales is lacking. Moreover, the multiscale nature of biodiversity, and specifically β diversity (i.e., spatial heterogeneity in species composition) was still largely missing in BEF studies. Here, using the vegetation and functional trait data collected from four 6-ha forest dynamics plots (FDPs) in temperate and tropical forests in China, we examine the scale-dependent relationships between tree diversity and the aboveground biomass (AGB), as well as the roles of species spatial heterogeneity in determining the AGB. In tropical forests, the effect of species richness on AGB decreased with spatial grains, while functional dominance played a stronger role at larger spatial grains. In temperate forests, positive relationship between diversity and AGB occurred at all spatial grains, especially on smaller scales. In both temperate and tropical forests, β diversity was positively correlated with AGB, but weaker than α diversity in determining AGB. Overall, complementarity and selection hypothesis play dominant role in determining AGB in temperate and tropical forests, respectively. The roles of these underlying mechanisms are more pronounced with increasing spatial scales. β diversity, a hitherto underexplored facet of biodiversity, is likely to increase ecosystem functions by species spatial turnover and should not be neglected in BEF explorations. Our findings have practical implications for forest management and demonstrate that biotic heterogeneity plays an important positive role in ecosystem functioning.

Beetle mania: Understanding pond aquatic beetles diversity patterns through a multiple-facet approach

Ecological studies searching for drivers of biodiversity variation have frequently focused on taxonomic richness. However, more aspects of biodiversity, namely diversity facets can be considered to properly assess biotic-environment relationships. Here, we explore the environmental factors that could control the four biodiversity facets of aquatic Coleoptera from 93 regionally sampled Patagonian ponds. We also explore which are the ponds with high diversity values of all facets to prioritize them with a high conservation value. We fitted generalized additive models (GAM) to test relationships among environment (i.e., local and climatic variables) and aquatic beetles diversity facets (i.e., richness (SD), functional diversity (FD), phylogenetic diversity (PD), and local contribution to local beta diversity (LCBD). Climatic drivers were the most important predictors of beetle diversity facets, which exhibited linear and nonlinear responses. Thus, ponds from warmer Patagonia exhibited the highest values of SD and PD, whereas LCBD also peaked on colder sites suggesting that ponds under extreme temperatures sustain unique beetle assemblages. Moreover, ponds located in areas with higher precipitation variability exhibit the highest values of LCBD (i.e., unique assemblages). This result in addition to arid conditions in Patagonia prevailing since 16 m.y.a made us think that Patagonian beetle pond-dwellers are basally adapted to aridity. We calculated an index that summarizes the four facets patterns, to assign high conservation value to those ponds with higher index values. The relative importance of each facet varies from pond to pond. Hence, this multifaceteded approach not only allows us to identify priority areas for biodiversity conservation but also focuses on the importance of including multiple facets to understand biodiversity spatial patterns.

On the relative importance of land use, landscape characteristics, bird and plant assemblages as drivers of Mediterranean ecosystem functioning

ContextMediterranean landscapes are undergoing severe transformations (land-use change and homogenization) that threatens biodiversity and the services these ecosystems provide. These effects can differ amongst biodiversity facets (plants vs. birds, taxonomic vs. functional) and ecosystem functions (e.g., seed dispersal, forest regeneration, pest control), although these are still poorly understood in Mediterranean landscapes.ObjectivesOur study aims at understanding how Mediterranean landscape characteristics and land use (tree croplands, shrublands and pine, oak and mixed forest) affect the diversity of birds and plants, and how these changes in biodiversity could affect ecosystem functioning.MethodsIn 2020–2021, we sampled 49 (5 × 5 m) plots in South-eastern Spain and from five different land uses: tree croplands, shrublands, and pine, oak and mixed forests. We measured land use, habitat diversity and size, together with birds and plant diversity. We assessed both direct and indirect (via bird and plant diversity) effects of landscape characteristics on 6 different ecosystem functions related to forest regeneration, predation, herbivory or aboveground biomass, which imply interactions between birds, plants and their environment.ResultsPlant communities responded mainly to local features (land use), whereas birds did so to habitat size and landscape diversity (within 500 m radius). Seed and caterpillar predation were more affected by bird’s diversity, whereas regeneration capacity of woody species was driven by both plants and birds. Land use was amongst the most important drivers of all measured functions, with generally higher functioning levels in oak and mixed forests than in the rest of land uses.ConclusionsOur results emphasize the complementary information obtained when considering multiple biodiversity facets in studying the consequences of landscape transformation. We also show that these multiple biodiversity changes can be as important as those of land-use or landscape characteristics for ecosystem functioning.

Local snow and fluvial conditions drive taxonomic, functional and phylogenetic plant diversity in tundra

To understand, how the diversity and hence functioning of tundra ecosystems might respond to altering environmental conditions, fine‐scale studies are needed as local conditions may buffer broad‐scale environmental changes. Furthermore, species functional traits and phylogeny may provide complementary insights to taxonomic diversity patterns as they link plant communities to ecosystem processes often more closely than species count. Here, we examined taxonomic, functional and phylogenetic plant diversity in relation to fundamental environmental factors, namely, growing degree days, snow persistence, soil moisture, pH and fluvial disturbance in northern Norway. The relationships between eight diversity metrics and environmental predictors were investigated using hierarchical generalised additive models. Our results indicated that taxonomic, functional and phylogenetic plant diversity in tundra are all strongly linked to local snow and fluvial conditions, with average variable importance of 0.19 and 0.14, respectively, whereas the importance of other predictors was low (average variable importance &lt; 0.06). The average explained deviance by the models was 0.23. Predicted hotspots of different diversity metrics overlapped notably and were mostly located along the streams. However, when the effect of taxonomic richness was removed from the phylogenetic and functional diversities their connections with environmental predictors were weaker but indicated strongest relationships with snow and soil pH showing distinct diversity hotspots in areas with low species richness. Our study demonstrates that investigating multiple facets of biodiversity enhances understanding on community patterns and their drivers. Furthermore, our results highlight the importance of addressing local hydrological conditions that represent both resources and disturbances for vegetation. As arctic and alpine areas are probably shifting from snow to rain dominated, incorporating snow and fluvial information into the models might be particularly important to better understand tundra ecosystems under global change.

Plant biodiversity offsets negative effects of metals and metalloids soil multi-contamination on ecosystem multifunctionality

Despite increasing metals and metalloids (MM) human-driven soil contamination, how it simultaneously alters biodiversity and ecosystem functioning remains unknown. We used a wide gradient of a 170-year-old MM soil multi-contamination in Mediterranean scrublands to assess the effects of soil multi-contamination on multiple plant biodiversity facets, microbial communities and ecosystem multifunctionality (EMF). We found an overall positive effect of plant biodiversity on EMF mediated by microbial communities, and allowing offsetting the negative impacts of MM soil multi-contamination, especially on soil water holding capacity and nitrogen content. The diversity of distant plant lineages was the key facet promoting EMF by enhancing microbial communities, whereas the subordinate species richness altered EMF. By developing a holistic approach of these complex relationships between soil multi-contamination, plant biodiversity, microbial communities and ecosystem functioning, our results reveal the potential of plant biodiversity, and especially the diversity of evolutionary distant species, to offset the alteration of ecosystem functioning by MM soil multi-contamination. In this worldwide decade of ecosystems restoration, our study helps to identify relevant facets of plant biodiversity promoting contaminated ecosystem functioning, which is crucial to guide and optimize management efforts aiming to restore ecosystems and preserve human health.

Threatened fish species in the Northeast Atlantic are functionally rare

AbstractAimThe criteria used to define the International Union for Conservation of Nature (IUCN) Red List categories are essentially based on demographic parameters at the species level, but they do not integrate species' traits or their roles in ecosystems. Consequently, current IUCN‐based protection measures may not be sufficient to conserve ecosystem functioning and services. Some species may have a singular combination of traits associated with unique functions. Such functionally distinct species are increasingly recognized as a key facet of biodiversity since they are, by definition, functionally irreplaceable. The aim of this study is to investigate whether threatened species are also functionally rare and to identify which traits determine extinction risk.LocationEuropean continental shelf seas.Time period1984–2020.Major taxa studiedMarine fish.MethodsUsing newly compiled trait information of 425 marine fish species in European waters, and more than 30 years of scientific bottom trawl surveys, we estimated the functional distinctiveness, restrictedness and scarcity of each species and cross‐referenced it with their IUCN conservation status.ResultsIn European continental shelf seas, 38% of the species threatened with extinction (9 out of 24 species) were identified as the most functionally distinct. By mapping extinction risk in the multidimensional species trait space, we showed that species with the greatest risk of extinction are long‐lived and of high trophic level. We also identified that the most functionally distinct species are sparsely distributed (4% of the total area on average) and have scarce abundances (&lt;1% of the relative mean abundance of common species).Main ConclusionsBecause a substantial proportion of threatened species are functionally distinct and thus may play unique roles in ecosystem functioning, we stress that species traits—especially functional rarity—should become an indispensable step in the development of conservation management plans.

Multiple facets of biodiversity are threatened by mining‐induced land‐use change in the Brazilian Amazon

AbstractAimMining is increasingly pressuring areas of critical importance for biodiversity conservation, such as the Brazilian Amazon. Biodiversity data are limited in the tropics, restricting the scope for risks to be appropriately estimated before mineral licensing decisions are made. As the distributions and range sizes of other taxa differ markedly from those of vertebrates—the common proxy for analysis of risk to biodiversity from mining—whether mining threatens lesser‐studied taxonomic groups differentially at a regional scale is unclear.LocationBrazilian Amazon.MethodsWe assess risks to several facets of biodiversity from industrial mining by comparing mining areas (within 70 km of an active mining lease) and areas unaffected by mining, employing species richness, species endemism, phylogenetic diversity and phylogenetic endemism metrics calculated for angiosperms, arthropods and vertebrates.ResultsMining areas contained higher densities of species occurrence records than the unaffected landscape, and we accounted for this sampling bias in our analyses. None of the four biodiversity metrics differed between mining and nonmining areas for vertebrates. For arthropods, species endemism was greater in mined areas. Mined areas also had greater angiosperm species richness, phylogenetic diversity and phylogenetic endemism, although less species endemism than unmined areas.Main ConclusionsUnlike for vertebrates, facets of angiosperm and arthropod diversity are relatively higher in areas of mining activity, underscoring the need to consider multiple taxonomic groups and biodiversity facets when assessing risk and evaluating management options for mining threats. Particularly concerning is the proximity of mining to areas supporting deep evolutionary history, which may be impossible to recover or replace. As pressures to expand mining in the Amazon grow, impact assessments with broader taxonomic reach and metric focus will be vital to conserving biodiversity in mining regions.

Stochastic and Deterministic Processes in the Establishment of Taxonomic, Functional and Phylogenetic Diversity of Ecological Communities: A Review of Modern Concepts

The assessment of biological diversity and the processes that govern it is important for ecological research and nature conservation. This review describes the main general theories and presents the modern concept of mechanisms for the assembly of ecological communities. Deterministic (abiotic filter and biotic interactions) and stochastic (ecological drift, dispersal and speciation) processes influencing taxonomic, functional and phylogenetic facets of diversity are discussed. Impact of certain processes (influence of individual environmental factors, biotic interactions, dispersal limitation) on the - and - levels of each facet of biodiversity are shown. In turn, estimation of them makes it possible to assess the contribution of certain processes on the biodiversity of the studied local communities.

Anthropogenic activities and environmental filtering have reshaped freshwater fish biodiversity patterns in China over the past 120 years

Over the past centuries, freshwater fish introductions and extinctions have been the major environmental and ecological crises in various water bodies in China. However, consequences of such crises on freshwater fish biodiversity in China remain only partially or locally studied. Furthermore, identifications of relatively sensitive areas along with stressors (i.e., environmental and anthropogenic drivers) influencing freshwater fish biodiversity patterns are still pending. Taxonomic, functional, and phylogenetic facets of biodiversity can well describe and evaluate the underlying processes affecting freshwater fish biodiversity patterns under different dimensionalities. Here we thus evaluated temporal changes in these facets of freshwater fish biodiversity as well as a new developed biodiversity index, multifaceted changes in fish biodiversity, for over a century at the basin level throughout China using both alpha and beta diversity approaches. We also identified the drivers influencing the changes in fish biodiversity patterns using random forest models. The results showed that fish assemblages in Northwest and Southwest China (e.g., Ili River basin, Tarim basin, and Erhai Lake basin) experienced extreme temporal and multifaceted changes in the facets of biodiversity compared with other regions, and environmental factors (e.g., net primary productivity, average annual precipitation, and unit area) largely drove these changes. Since fish faunas in over 80% of China's water bodies covering more than 80% of China's surface were currently undergoing taxonomic, functional, and phylogenetic homogenization, targeted conservation and management strategies should be proposed and implemented, especially for the areas with relatively high changes in biodiversity.