Biodegradation In Environment Research Articles

Biodegradation and disintegration of expanded polystyrene by land snails Achatina fulica

Despite increasing evidence of widespread plastic pollution in soil, it remains largely unknown about the fate of plastic influenced by soil animals. In this study, ingestion and biodegradation capability of expanded polystyrene (PS) foam was investigated in a globally distributed soil invertebrate, Achatina fulica. After 4-week exposure, 18.5 ± 2.9 mg polystyrene was ingested per snail, and egested microplastics (1.343 ± 0.625 mm) in feces with significant mass loss of mean 30.7%. Gel permeation chromatography analysis indicated a significant increase in weight-average molecular weight (Mw) and number-average molecular weight (Mn) of feces-residual PS, indicating limited extent depolymerization. Fourier transform infrared spectroscopy and proton nuclear magnetic resonance confirmed the formation of functional groups of oxidized intermediates. Suppression of gut microbes with oxytetracycline did not affect the depolymerization, indicating the independence of gut microbes. High-throughput sequencing analysis revealed significant shifts in the gut microbiome after ingestion of PS, with an increase of family Enterobacteriaceae, Sphingobacteriaceae, and Aeromonadaceae, suggesting that gut microorganisms were associated with PS biodegradation. These findings suggest that plastic litter can be disintegrated into microplastics and partially biodegraded by A. fulica, which highlights the significance of soil animals for the fate of plastic and its biodegradation in soil environments.

Elastic and biodegradable chitosan/agarose film revealing slightly acidic pH for potential applications in regenerative medicine as artificial skin graft

The aim of this work was to develop new method for the production of chitosan/agarose (CHN/A) film that could serve as a potential artificial skin substitute for regenerative medicine applications. Within this new production method, the concentrations of biomaterial components (chitosan in CH3COOH and agarose in NaOH) were optimized to provide neutralization of the resultant mixture up to pH approx. 6.0 without uncontrolled precipitation (gelation) of chitosan constituent. Produced thin film was subjected to comprehensive evaluation of its biomedical potential by determination of mechanical, physicochemical, and biological properties. It was demonstrated that the developed CHN/A film reveals slightly acidic pH of 5.98 known to support skin regeneration, high exudate absorption capacity, and is prone to biodegradation in simulated enzymatic wound environment. Performed tensile test proved high elastic deformations of the film (Young's modulus = 0.02 MPa, elongation at break = 23%) in a wet state, which would allow suitable stretching after application at the wound site. Moreover, novel biomaterial is non-toxic and supports fibroblast growth on its surface. Based on the obtained results it may be concluded that the produced CHN/A film possesses all necessary features of the artificial skin substitute.

Study of the structural properties and degradation of coated wood with polydopamine/hydroxyapatite/chitosan hybrid nanocomposite in seawater

Increasing environmental concerns and increasing demands for reproducible natural resources have made wood a viable option for use in various industries, particularly the marine industry. In this study, the wood was treated with three coatings, and then its biodegradability in the marine environment was investigated. The first coating, inspired secreted substance from bivalve mollusks called dopamine was used, which has the ability to adhere to different surfaces. The second coating, hydroxyapatite crystals were formed by immersion of treated wood for 14 days in simulated body fluid (SBF) × 1.5 solutions. Extracted chitosan from shrimp waste was used for the third layer. The contact angle (CA) of the treated wood with polydopamine/hydroxyapatite/chitosan showed 130°. The results of FT-IR, XRD, and FE-SEM confirmed the layers on the surface of the wood. In the next step, control and treated woods were exposed to seawater for 6 months. The results showed that the control woods had more color variations than the treated woods with more swelling, more infestation of barnacles. The results of FT-IR and XRD showed that structures of lignin, cellulose, and hemicelluloses of the control wood were more demolished than those of treated wood after immersion in seawater.

Magnesium Alloys With Tunable Interfaces as Bone Implant Materials.

Magnesium (Mg) based biodegradable materials are a new generation orthopedic implant materials that are intended to possess same mechanical properties as that of bone. Mg alloys are considered as promising substitutes to permanent implants due to their biodegradability in the physiological environment. However, rapid corrosion rate is one of the major constraints of using Mg alloys in clinical applications in spite of their excellent biocompatibility. Approaches to overcome the limitations include the selection of adequate alloying elements, proper surface treatment, surface modification with coating to control the degradation rate. This review focuses on current advances on surface engineering of Mg based biomaterials for biomedical applications. The review begins with a description of corrosion mechanism of Mg alloy, the requirement for appropriate surface functionalization/coatings, their structure-property-performance relationship, and suitability for biomedical applications. The control of physico-chemical properties such as wettability, surface morphology, surface chemistry, and surface functional groups of the coating tailored by various approaches forms the pivotal part of the review. Chemical surface treatment offers initial protection from corrosion and inorganic coating like hydroxyapatite (HA) improves the biocompatibility of the substrate. Considering the demand of ideal implant materials, multilayer hybrid coatings on Mg alloy in combination with chemical pretreatment or inorganic HA coating, and protein-based polymer coating could be a promising technique to improve corrosion resistance and promote biocompatibility of Mg-based alloys.

Microbial eco-physiological strategies for salinity-mediated crude oil biodegradation

Salinity variability strongly affects the behaviors of oil degrading bacteria for spilled oil biodegradation in the marine environment. However, limited studies explored the strategies of microbes on salinity-mediated crude oil biodegradation. In this study, a halotolerant bio-emulsifier producer, Exiguobacterium sp. N41P, was examined as a model strain for Alaska North Slope (ANS) crude oil (0.5%, v/v) biodegradation. Results indicated that Exiguobacterium sp. N41P could tolerant a wide range of salinity (0–120 g/L NaCl) and achieve the highest degradation efficiency under the salinity of 15 g/L NaCl due to the highest biofilm formation ability. Moreover, increased salinity induced decreased cell surface hydrophobicity and a migration of microbial growth from oil phase to aqueous phase, leading to limited bio-emulsifier productivity and depressed degradation of insoluble long-chain n-alkanes while enhancing the degradation of relative soluble naphthalene. Research findings illustrated the microbial eco-physiological mechanism for spilled oil biodegradation under diverse salinities and advanced the understanding of sophisticated marine crude oil biodegradation process.

Aerobic biodegradation of bio-based plastics in the seawater/sediment interface (sublittoral) marine environment of the coastal zone – Test method under controlled laboratory conditions

Pollution of the seas due to plastic litter is a rapidly growing environmental problem. Among several actions, legal and technological, undertaken to alleviate this problem, included are the control of single use conventional plastics and the replacement of conventional non-biodegradable plastics with innovative biodegradable-in-the-sea polymers, both aiming at the mitigation of marine litter accumulation. Laboratory tests have been used to characterize plastics regarding their biodegradation in various environments. Biodegradation of plastics depends on the inherent characteristics of the polymer and the particular marine habitat conditions. In the present work, the international standard test method ISO 19679 (2016) for determining the aerobic biodegradation of non-floating plastic materials in a seawater-sediment interface of the coastal marine zone under laboratory simulated conditions is evaluated. Modifications are proposed to improve the reliability of this test method in some aspects. Agitation of the seawater surface in the bioreactor was found to enhance the continuous availability of oxygen at the seawater-sediment interface, thus assuring aerobic biodegradation conditions throughout the test simulating real sublittoral conditions. Additional recommended improvements include the use of larger samples and supplementary nutrients to optimise biodegradation conditions. The laboratory measurements were validated by field experiments. The proposed modifications and refinements optimise the robustness and reliability of the test method for determining aerobic biodegradation of plastic materials in a simulated seawater-sediment interface of the coastal zone.

A complete route for biodegradation of potentially carcinogenic cyanotoxin microcystin-LR in a novel indigenous bacterium

Microcystin-leucine-arginine (MC-LR), a cyclic potentially carcinogenic hepatotoxin, occurs frequently in aquatic habitats worldwide and seriously threatens ecosystem and public health. Limited effectiveness of physicochemical treatments to remove MC-LR from drinking water has led to a search for alternative cost-effective and environment friendly biodegradation strategies. Obtaining MC-degrading bacteria and understanding their MC-degrading mechanisms are outstanding challenges. Here, a novel indigenous bacterium named Sphingopyxis sp. YF1 with a high efficient capacity for MC-degradation was successfully isolated from eutrophic Lake Taihu. Through integrating mass spectrometer and multi-omics analyses accompanied by functional verification of certain genes and proteins, a complete MC-degradation pathway was firstly identified, in which MC-LR was sequentially degraded into linearized MC-LR, tetrapeptide, Adda, phenylacetic acid, and finally potential product CO2. Some specific proteins such as microcystinase, linearized-microcystinase, tetrapeptidease and PAAase responsible for this pathway were identified. This study pioneeringly demonstrated that MC-LR can be completely degraded through natural remediation processes and revealed a significant potential for MC-LR biodegradation in both natural environment and engineered systems.

Strategy to improve crude oil biodegradation in oligotrophic aquatic environments: W/O/W fertilized emulsions and hydrocarbonoclastic bacteria.

We studied petroleum biodegradation by biostimulation by using water in oil in water (W/O/W) double emulsions. These emulsions were developed using seawater, canola oil, surfactants, and mineral salts as sources of NPK. The emulsions were used in the simulation of hydrocarbon bioremediation in oligotrophic sea water. Hydrocarbon biodegradation was evaluated by CO2 emissions from microcosms. We also evaluated the release of inorganic nutrients and the stability of the emulsion's droplets. The double emulsions improved CO2 emission from the microcosms, suggesting the increase in the hydrocarbon biodegradation. Mineral nutrients were gradually released from the emulsions supporting the hydrocarbon biodegradation. This was attributed to the formation of different diameters of droplets and therefore, varying stabilities of the droplets. Addition of the selected hydrocarbonoclastic isolates simulating bioaugmentation improved the hydrocarbon biodegradation. We conclude that the nutrient-rich W/O/W emulsion developed in this study is an effective biostimulation agent for bioremediation in oligotrophic aquatic environments.

Tuning Crystal Structures of Iron-Based Metal-Organic Frameworks for Drug Delivery Applications.

Iron-based metal–organic frameworks (Fe-MOFs) have emerged as promising candidates for drug delivery applications due to their low toxicity, structural flexibility, and safe biodegradation in a physiological environment. Here, we studied two types of Fe-MOFs: MIL-53 and MIL-88B, for in vitro drug loading and releasing of ibuprofen as a model drug. Both Fe-MOFs are based on the same iron clusters and organic ligands but form different crystal structures as a result of two different nucleation pathways. The MIL-53 structure demonstrates one-dimensional channels, while MIL-88B exhibits a three-dimensional cage structure. Our studies show that MIL-53 adsorbs more ibuprofen (37.0 wt %) compared to MIL-88B (19.5 wt %). A controlled drug release was observed in both materials with a slower elution pattern in the case of the ibuprofen-encapsulated MIL-88B. This indicates that a complex cage structure of MIL-88 is beneficial to control the rate of drug release. A linear correlation was found between cumulative drug release and the degree of material degradation, suggesting the biodegradation of Fe-MILs as the main drug elution mechanism. The cytotoxicity of MIL-88B was evaluated in vitro with NIH-3T3 Swiss mouse fibroblasts, and it shows that MIL-88B has no adverse effects on cell viability up to 0.1 mg/mL. This low toxicity was attributed to the morphology of MIL-88B nanocrystals. The very low toxicity and controlled drug release behavior of Fe-MIL-88B suggest that better materials for drug-delivery applications can be created by controlling not only the composition but also the crystal structure and nanoparticle morphology of the material.

Aerobic biodegradation in freshwater and marine environments of textile microfibers generated in clothes laundering: Effects of cellulose and polyester-based microfibers on the microbiome

The aerobic biodegradation of common textiles that shed microfibers during laundering was evaluated under the action of microbes found in the environment, such as lake and seawater, and activated sludge at a low concentration from a wastewater treatment plant (WWTP). Under these conditions, the biodegradation potential was the same in all the experiments: Microcrystalline Cellulose (MCC) > Cotton > Rayon > Polyester/Cotton ≫ Polyester. Nevertheless, for cotton and rayon yarns, >70% biodegradation was achieved with activated sludge at low concentration and lake water, whereas in seawater, about 50% degradation was reached. Polyester did not appreciably degrade. The biodegradation results herein indicate potential not absolutes in nature. The bacterial diversity analyses in the different biodegradation inoculums show that there are distinct bacterial communities related to the assimilation and mineralization of complex carbohydrates that were promoted with the cellulosic MCC, cotton, and rayon samples different than the polyester sample.

Micro‐by‐micro interactions: How microorganisms influence the fate of marine microplastics

AbstractMicroorganisms drive the biogeochemical cycles that link abiotic and biotic processes in the aqueous environment and are intricately associated with plastic debris. The presence of microplastics in water and sediment introduces new concerns as small particle size allows for increased pathways of microplastics in the food web and element cycles. In this review, we present the current state of knowledge on microbe‐plastic interactions and summarize the potential impact of biogeochemical processes on plastic distribution, cycling, transport, and sedimentation. We explore how microbe‐plastic interactions influence the exposure of consumers to microplastics and plastic degradation products. Key methods used to elucidate biofilm development, microbial biodegradation, and microplastic detection in the aqueous environment are discussed. Finally, we comment on potential future questions and research directions needed to further define the role of microorganisms in the environmental fate of microplastics.

Effects of carbon sources on 17 beta-estradiol degradation by Sphingomonas sp. and the analysis of the involved intracellular metabolomics.

17β-estradiol (E2) ubiquitously exists in various water bodies with long-term endocrine-disrupting and carcinogenic impacts on wildlife even at the trace level of ng L-1. However, it remains unclear how easy-to-degrade carbon sources alter E2 biodegradation patterns. In this study, E2 biodegradation by Sphingomonas sp. MCCC 1A06484 was investigated with regard to alternative carbon sources. Results showed that the bacterium preferentially utilized glucose, sodium succinate and sodium acetate over E2. Interestingly, the presence of these preferred nutrients increased the E2 removal efficiency by 20.1%. Furthermore, a positive relation (p < 0.05) between the utilization of total organic carbon (TOC) and E2 was found. Using intracellular metabolomics by UHPLC-QTOF-MS, 11 up-regulated and 35 down-regulated metabolites (variable importance > 1, p < 0.05) were identified in the bacterium when cultivated with E2 under various carbon and nitrogen backgrounds. The E2 exposure contributed to metabolism changes of lipid, nucleotide, carbohydrate, amino acid and membrane transport, which were considered to play roles in the E2 metabolism. The up-regulated phosphatidylcholine might act as an indicator during the bacterial degradation of E2. Generally, this study contributes to an in-depth understanding of E2 biodegradation in complex environments with multiple carbon and nitrogen sources.

Design rules for environmental biodegradability of phenylalanine alkyl ester linked ionic liquids

In this study, the impact of the length of the alkyl chain and cationic head group on the environmental biodegradability of l-phenylalanine ester derived ILs was systematically studied.

Biodegradation-Mediated Enzymatic Activity-Tunable Molybdenum Oxide Nanourchins for Tumor-Specific Cascade Catalytic Therapy.

Recent advances in nanomedicine have facilitated the development of potent nanomaterials with intrinsic enzyme-like activities (nanozymes) for cancer therapy. However, it remains a great challenge to fabricate smart nanozymes that precisely perform enzymatic activity in tumor microenvironment without inducing off-target toxicity to surrounding normal tissues. Herein, we report on designed fabrication of biodegradation-medicated enzymatic activity-tunable molybdenum oxide nanourchins (MoO3-x NUs), which selectively perform therapeutic activity in tumor microenvironment via cascade catalytic reactions, while keeping normal tissues unharmed due to their responsive biodegradation in physiological environment. Specifically, the MoO3-x NUs first induce catalase (CAT)-like reactivity to decompose hydrogen peroxide (H2O2) in tumor microenvironment, producing a considerable amount of O2 for subsequent oxidase (OXD)-like reactivity of MoO3-x NUs; a substantial cytotoxic superoxide radical (·O2-) is thus generated for tumor cell apoptosis. Interestingly, once exposed to neutral blood or normal tissues, MoO3-x NUs rapidly lose the enzymatic activity via pH-responsive biodegradation and are excreted in urine, thus ultimately ensuring safety. The current study demonstrates a proof of concept of biodegradation-medicated in vivo catalytic activity-tunable nanozymes for tumor-specific cascade catalytic therapy with minimal off-target toxicity.

Monod-based ‘single-data’ strategy for biodegradation screening tests

Environmental contextObtaining biodegradation data over time can be difficult, especially when dealing with environmental compartments of increasing complexity. We evaluated the possibility of obtaining a full biodegradation depletion curve from a single biodegradation-time experimental measurement, and found that environmental information related to potential chemical persistence can be derived. The applicability of this ‘single-data’ strategy is illustrated using simulated and experimental data for several compounds. AbstractInformation obtained from biodegradability tests, e.g. half-life (t50) or kinetics parameters, is relevant in environmental risk assessment of new chemicals. In these tests, the removal of the tested compound is measured over a prefixed period of time (e.g. 28 days in ready biodegradability tests) to derive a substrate depletion curve. The implementation can be time-consuming, costly and difficult, especially when the complexity of the environmental compartment increases. In this work, the possibility of obtaining a full biodegradation depletion curve from a single biodegradation-time experimental data point (‘single-data’ strategy) was evaluated. Monod kinetics are assumed to avoid the limitations related to first-order kinetics (only valid for very low substrate concentrations). Experimental and simulated data were used to illustrate the potential of the proposed strategy. The effects on the estimates of several variables (e.g. Monod kinetics parameters, compound concentration or variability in biodegradation data) and the errors introduced to some of the variables were also evaluated. The results suggest that the proposed strategy can be used as a rapid (based on data measured at day 7) and low-cost screening approach to anticipate the result of a biodegradability test for new chemicals. The applicability and practical limitations of the ‘single-data’ strategy have been illustrated using experimental data for several compounds ranging from readily biodegradable (e.g. benzoic acid, acetylsalicylic acid, p-toluic acid) to potentially persistent compounds (e.g. bupivacaine, p-phenitidine, phtadinitrile).

Removal of phenol by Isochrysis galbana in seawater under varying temperature and light intensity

Phenol is a common industrial chemical produced and transported worldwide largely. Therefore, accidental spillage of phenol in the ocean causes an increasing concern. Microalgae are promising to remove phenol from marine waters. However, temperature and light intensity are two main factors that markedly influence biodegradation in marine environments. In this study, a marine golden alga Isochrysis galbana is selected to research the removal of phenol under different temperatures (10–30°C) and light intensities (0–240 µmol/(m2·s)). The results show that the most suitable temperature and light intensity for phenol removal are 20°C and 180 µmol/(m2·s), respectively, and 100 mg/L of phenol can be completely removed by microalga in 24 h at these conditions. I. galbana can also remove phenol under dark and low-temperature conditions. The removal of phenol by I. galbana at diverse temperatures and light intensities conform to first-order kinetics, and the process under dark conditions conform to zero-order kinetics. Thus, I. galbana can be used in the in-situ bioremediation of polluted seawater by phenol.

Penggunaan Probiotik pada Budidaya Ikan Lele Sangkuring (Clarias sp.) di Drum Plastik di Desa Arisan Jaya, Ogan Ilir, Sumatera Selatan

Sasanti AD, Anggraini SP. 2019. The utilizing of probiotics for catfish sangkuriang (Clarias sp.) cultivation in plastic pond at Arisan Jaya Village Ogan Ilir, South Sumatera. Jurnal Lahan Suboptimal: Journal of Suboptimal Lands. 8(2):134-140. The research was to provide information to farmers on the use probiotics on catfish (Clarias sp.). The used of probiotics aimed to maintain balance pathogenic microbes and suppress activity in the digestive tract , and the environmental biodegradation waters through the process. This study aimed to compare of field Practice is to provide information to the people about the utilizing of probiotics for catfish (Clarias sp.) cultivation a plastic drums at Arisan Jaya village Ogan Ilir. The research used two plastic drum media as a catfish maintenance container, the first maintenance container there was no addition of probiotics, while in the second maintenance container there was the addition of probiotics. The parameters were observed in this study were absolute weight growth, absolute the length growth, survival, and water quality. The result of this research showed that growth of catfish cultivation in plastic pond with length of 3,51cm and weight of catfish the used probiotics of 17,15 g was higher than the growth length of 2,46 cm and weight of catfish were not using probiotics of 12,03 g. The survival rate of the catfish utilizing of probiotics cultivation in plastic drums with the use probiotics and not use probiotics was 100%.

Polymer-Coated Mesoporous Carbon as Enzyme Platform for Oxidation of Bisphenol A in Organic Solvents.

Bisphenol A (BPA) is not only a widely used chemical but also a toxic pollutant, and its biodegradation in an aqueous environment is hard due to its near insolubility in water. While the enzyme tyrosinase can oxidize BPA in organic solvents, it does so only very slowly. In the present study, we have found that in toluene the catalytic activity of tyrosinase deposited onto coated mesoporous carbon is significantly enhanced when the support is precoated with polyethylenimine. The resultant enzymatically formed o-quinone is both easily recoverable and potentially useful monomer. As a particular example, the o-quinone readily reacts with diamine in toluene to form poly(amino-quinone) polymers, which are suitable for anticorrosion, energy storage, or biosensor applications.

BIODEGRADATION OF ANTIBIOTICS: THE BALANCE BETWEEN GOOD AND BAD

The worldwide population rise corroborated with the raise of the health-care standards have generated an escalation of the antibiotic production and uncontrolled usage. The subsequent effects of this escalation have led to an increase of the antibiotic resistance rates, Romania is in the top of the EU countries regarding the antibiotic resistance rates, and to a continuous presence in the environment, including the aquatic environment. Unfortunately, the present design of the classical WWTPs is not optimized for the efficient removal of antibiotics since these compounds may have highly soluble and polar molecular structures. Instead, antibiotics removal using microorganisms could be an ecofriendly solution to this environmental issue, as long as their antibiotic degradation structures are not more toxic than the antibiotic itself. In the present review, we focus on the environmental presence and biodegradation of the most commonly used antibiotics as well as on their biodegradation, based on bacterial model, monitored by mass-spectrometric methods.

Effects of hydrodynamic disturbances on biodegradation of tetrabromobisphenol A in water-sediment systems.

Tetrabromobisphenol A (TBBPA) is an emerging contaminant and exists widely in river and lake systems due to its widespread use. In natural water-sediment systems, hydrodynamic disturbances always exist. However, few studies have investigated the mechanism of TBBPA biodegradation under the influence of water disturbances. In this paper, using a specialized type of racetrack-style flumes, the TBBPA biodegradation in water-sediment systems was studied under the influence of three typical hydrodynamic disturbances. The results of 5-week experiments showed that strong hydrodynamic disturbances greatly accelerate the TBBPA biodegradation rate of the water-sediment systems. The half-lives (T1/2) under static condition (SC) were approximately 40.2 days, and the T1/2 was reduced to 16.0 days under strong hydrodynamic condition (SHC). Furthermore, the physicochemical properties and corresponding bacterial communities under these conditions were investigated to help explain the TBBPA biodegradation mechanism. The results showed that strong currents could promote dissolved oxygen (DO) levels, increase nutrient concentrations, and reduce the bacterial diversity in the sediment. Meanwhile, due to the increase in DO and nutrient concentrations, the aerobic bacterial genera conducting TBBPA biodegradation showed rapid growth with strong water disturbances, while the growth of anaerobic bacterial genera was inhibited. Citrobacter, which was the most dominant degrading bacterial genus (0.6%-14.9% in water and 3.5%-17.4% in sediment), was closely related to water disturbances and may be linked to enhanced TBBPA biodegradation. Other minor degrading bacterial genera, such as Bacillus, Sphingomonas, Anaeromyxobacter, Geobacter, Clostridium, and Flavobacterium, were also found in these water-sediment systems. The findings from this study showed the importance of considering hydrodynamic disturbance in understanding TBBPA biodegradation in aquatic environments.