Benthic Light Research Articles

Energy inputs imprint seasonality and fractal structure on river metabolic regimes

AbstractThe temporal structures of gross primary production (GPP) and ecosystem respiration (ER) vary across time scales in response to complex interactions among dynamic drivers (e.g., flow, light, temperature, organic matter supply). To explore emergent patterns of river metabolic variation, we applied frequency‐domain analysis to multiyear records of metabolism across 87 US rivers. We observed a dominant annual periodicity in metabolic variation and universal fractal scaling (i.e., power spectral density inversely correlated with frequency) at subannual frequencies, suggesting these are foundational temporal structures of river metabolic regimes. Frequency‐domain patterns of river metabolism aligned best with drivers related to energy inputs: benthic light for GPP and GPP for ER. Simple river metabolism models captured frequency‐domain patterns when parameterized with appropriate energy inputs but neglecting temperature controls. These results imply that temporal variation of energy supply imprints directly on metabolic signals and that frequency‐domain patterns provide benchmark properties to predict river metabolic regimes.

Habitat suitability modelling to improve understanding of seagrass loss and recovery and to guide decisions in relation to coastal discharge

Habitat suitability modelling was used to test the relationship between coastal discharges and seagrass occurrence based on data from Adelaide (South Australia). Seven variables (benthic light including epiphyte shading, temperature, salinity, substrate, wave exposure, currents and tidal exposure) were simulated using a coupled hydrodynamic-biogeochemical model and interrogated against literature-derived thresholds for nine local seagrass species. Light availability was the most critical driver across the study area but wave exposure played a key role in shallow nearshore areas. Model validation against seagrass mapping data showed 86 % goodness-of-fit. Comparison against later mapping data suggested that modelling could predict ~745 ha of seagrass recovery in areas previously classified as ‘false positives’. These results suggest that habitat suitability modelling is reliable to test scenarios and predict seagrass response to reduction of land-based loads, providing a useful tool to guide (investment) decisions to prevent loss and promote recovery of seagrasses.

Sand-capping stabilizes muddy sediment and improves benthic light conditions in eutrophic estuaries: Laboratory verification and the potential for recovery of eelgrass (Zostera marina)

Decades of eutrophication have increased water turbidity in Danish estuaries and led to light limitation of eelgrass (Zostera marina) growth. Former eelgrass areas are now denuded and consist of organic-rich muddy sediment with frequent resuspension events that maintain a high turbidity state. In addition, low anchoring capacity of eelgrass in the soft organic-rich sediments has contributed to eelgrass loss. When navigation channels in Danish estuaries are dredged, large amounts (~100.000 m3) of sandy sediment are shipped to remote dumping sites. Instead, we suggest that the dredged sand is used to consolidate adjacent muddy areas. We demonstrate in the present laboratory study that capping of fluid muddy sediment with 10 cm of sand is feasible without any vertical mixing and that this marine restoration approach potentially can lower the magnitude and frequency of resuspension events. Erosion of suspended solids change from 5 g m−2 min−1 above muddy sediment as to about 0.2 g m−2 min−1 after sand-capping, implying that the application of sand can improve light conditions. Moreover, since erosion thresholds increase from about 10–12 cm s−1 for mud to 40 cm s−1 for sand-capped mud the anchoring capacity of rooted vegetation is increased. However, the full potential of sand-capping to facilitate restoration of otherwise lost eelgrass habitats requires verification by large-scale field experiments.

A spatial analysis of seagrass habitat and community diversity in the Great Barrier Reef World Heritage Area

The Great Barrier Reef World Heritage Area (GBRWHA) in north eastern Australia spans 2500 km of coastline and covers an area of ~ 350,000 km2. It includes one of the world’s largest seagrass resources. To provide a foundation to monitor, establish trends and manage the protection of seagrass meadows in the GBRWHA we quantified potential seagrass community extent using six random forest models that include environmental data and seagrass sampling history. We identified 88,331 km2 of potential seagrass habitat in intertidal and subtidal areas: 1111 km2 in estuaries, 16,276 km2 in coastal areas, and 70,934 km2 in reef areas. Thirty-six seagrass community types were defined by species assemblages within these habitat types using multivariate regression tree models. We show that the structure, location and distribution of the seagrass communities is the result of complex environmental interactions. These environmental conditions include depth, tidal exposure, latitude, current speed, benthic light, proportion of mud in the sediment, water type, water temperature, salinity, and wind speed. Our analysis will underpin spatial planning, can be used in the design of monitoring programs to represent the diversity of seagrass communities and will facilitate our understanding of environmental risk to these habitats.

Impact of short-term light variability on the photobiology of turbid water corals

Benthic light availability is readily affected by natural drivers of an ecosystem and by anthropogenic-induced stressors. Rapid urbanization in coastal regions can induce light variability for reef-building corals that use photosynthesis as a primary form of energy. However, very little data exists on the photosynthesis of light-limited coral species and their acclimation responses to an additional light variability. This experimental study explored the effects of two contrasting light intensities: high light (HL) (95% increase to in situ light) and low light (LL) (8–10% of in situ light) on three locally dominant coral species. Turbinaria mesenterina, Porites lutea, and Goniopora cellulosa were collected from a 4-m depth from the turbid regions of Pulau Kendi in Northern Peninsular Malaysia. This study documented current photobiological responses of all species and rapid photoacclimation responses only for T. mesenterina in HL treatment. All three species incurred photoinactivation under LL stress; however, T. mesenterina was photosynthetically healthier for an extended period of the experiment. P.lutea recorded partial photoacclimation and non-recovering photoprotectants to both light stresses. While G. cellulosa incurred rapid declines in photosynthetic yields along with no photoacclimation responses. The data obtained for this geographic range of turbid water corals is important as additional light stress from point-source pollutants and global urbanization activities are expected to increase. Improving our understanding of their responses to environmental change will be central to global coral reef conservation efforts andcan be used for effective management practices in targeted coral conservation and rehabilitation approaches for turbid habitats.

A benthic light index of water quality in the Great Barrier Reef, Australia

Good water quality is essential to the health of marine ecosystems, yet current metrics used to track water quality in the Great Barrier Reef are not strongly tied to ecological outcomes. There is a need for a better water quality index (WQI). Benthic irradiance, the amount of light reaching the seafloor, is critical for coral and seagrass health and is strongly affected by water quality. It therefore represents a strong candidate for use as a water quality indicator. Here, we introduce a new index based on remote sensing benthic light (bPAR) from ocean color. Resulting bPAR index timeseries, based on the extent to which the observed bPAR fell short of the locally- and seasonally-specific optimum, showed strong spatial and temporal variability, which was consistent with the dynamics that govern changes in water clarity in the Great Barrier Reef. Our new index is ecologically relevant, responsive to changes in light availability and provides a robust metric that may complement current Great Barrier Reef water quality metrics.

Assessing the risk of light reduction from natural sediment resuspension events and dredging activities in an inshore turbid reef environment

The reduction in benthic light from natural sediment resuspension events, dredging activities and clouds was quantified over multiple time periods (days to weeks) from a 3-year in-situ field study in the inshore turbid-zone coral communities of the Great Barrier Reef. The results were then used to examine the tolerance levels of three coral species and a sponge to light reduction and associated changes in spectral light quality (in conjunction with elevated sediment concentrations) in a 28-day laboratory-based study. All species survived the exposures but sub-lethal responses involving changes in pigmentation, lipids and lipid ratios were observed. A pocilloporid coral was the most sensitive taxon, with a 28-d EC10 value for bleaching (dissociation of the symbiosis) of 2.7 mol photons m2 d−1. The possibility of such light reduction levels occurring naturally and/or during maintenance dredging activities was then examined using the 3-year in-situ field study as part of a risk assessment.

Water column gradients beneath the summer ice of a High Arctic freshwater lake as indicators of sensitivity to climate change

Ice cover persists throughout summer over many lakes at extreme polar latitudes but is likely to become increasingly rare with ongoing climate change. Here we addressed the question of how summer ice-cover affects the underlying water column of Ward Hunt Lake, a freshwater lake in the Canadian High Arctic, with attention to its vertical gradients in limnological properties that would be disrupted by ice loss. Profiling in the deepest part of the lake under thick mid-summer ice revealed a high degree of vertical structure, with gradients in temperature, conductivity and dissolved gases. Dissolved oxygen, nitrous oxide, carbon dioxide and methane rose with depth to concentrations well above air-equilibrium, with oxygen values at > 150% saturation in a mid-water column layer of potential convective mixing. Fatty acid signatures of the seston also varied with depth. Benthic microbial mats were the dominant phototrophs, growing under a dim green light regime controlled by the ice cover, water itself and weakly colored dissolved organic matter that was mostly autochthonous in origin. In this and other polar lakes, future loss of mid-summer ice will completely change many water column properties and benthic light conditions, resulting in a markedly different ecosystem regime.

New insights into physiological effects of anoxia under darkness on the iconic seagrass Zostera marina based on a combined analysis of transcriptomics and metabolomics

Coastal hypoxia/anoxia is a major emerging threat to global coastal ecosystems. Macroalgae blooms of tens of kilometers are often observed in open waters. These blooms not only cause a lack of oxygen, but also benthic light limitation. We explored the physiological responses of Zostera marina L. to anoxia under darkness. After exposing Z. marina to anoxia under darkness for 72 h, we measured the elongation of leaves and the decrease in maximal quantum yield of photosystem II (Fv/Fm), and investigated the transcriptomic and metabolomic responses to anoxic stress based on RNA-sequencing and liquid chromatography-mass spectrometry (LC-MS) technology. The results showed that anoxic stress significantly reduced the leaf Fv/Fm, and had a significant negative effect on the photosynthesis and growth of Z. marina. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis of up-regulated differentially expressed genes (DEGs) showed that glycolysis was the most significant enrichment pathway (p < 0.001), and most of the important products in glycolysis were significantly up-regulated. This indicated that the glycolysis process of anaerobic respiration is promoted under anoxia. The metabolite results also showed that glyceraldehyde 3-phosphate in the glycolysis pathway was significantly up-regulated. Moreover, three genes encoding sucrose synthase (gene-ZOSMA_310G00150, gene-ZOSMA_81G00980, and gene-ZOSMA_8G00730) and one gene encoding alpha-amylase (gene-ZOSMA_95G00270) were significantly up-regulated, providing the sugar basis for the subsequent increase in glycolysis. Furthermore, gene-encoding oxoglutarate dehydrogenase, the rate-limiting step of the tricarboxylic acid (TCA) cycle, was significantly down-regulated, indicating that this cycle was inhibited under anoxia. Metabolomic results showed that L-tryptophan, L-phenylalanine, and DL-leucine were significantly up-regulated. Only significantly decreased glutamate and non-significantly decreased glutamine, substances consumed in alanine and γ-aminobutyric acid (GABA) shunt mechanisms, were detected in the leaves, while GABA and alanine were not detected. The results of this study show that anoxic stress induces a programmed transcriptomic and metabolomic response in seagrass, most likely reflecting a complex strategy of acclimation and adaptation in seagrass to resist anoxic stress.

Estimating Benthic Light Regimes Improves Predictions of Primary Production and constrains Light-Use Efficiency in Streams and Rivers

Light-use efficiency (LUE) describes conversion of incident light into gross primary production (GPP), combining the inherent photosynthetic efficiency of chloroplasts with light-capture ability of the autotrophic community. In lotic ecosystems, LUE is poorly constrained, in part because most studies neglect water-column attenuation. We hypothesized that rigorous quantification of benthic light would (1) improve GPP predictions and (2) constrain cross-site variation in LUE. We used a field-validated light model to successively attenuate open-sky irradiance through the riparian canopy and water column to estimate benthic light at 11 sites spanning discharge and dissolved-color gradients where we simultaneously calculated daily GPP. Our results indicate substantial water-column attenuation (up to 96% of stream-surface light), implying significant underestimation of LUE using stream-surface light alone. Benthic light dramatically improved GPP predictions, especially after considering mean-light conditions, which we suggest enumerates ecosystem light-capture ability due to biomass density. The model including mean-light effects explained 78% of GPP variation across sites and yielded a LUE identical to terrestrial ecosystems (1.9%). Interactions between daily and mean-light only slightly improved model fit (R2 = 0.80), implying higher LUE at sites with higher mean light, but notably reduced LUE variation across sites compared with individual site analyses. This suggests that better representation of benthic light regimes leads to LUE convergence. Our study supports use of a global river LUE to translate large-scale predictions of stream light regimes into expected GPP, from which disturbance and nutrient limitation effects can then be discerned.

Using species distribution models to guide seagrass management

Seagrasses provide essential and global ecosystem services. However, due to natural and anthropogenic disturbance, seagrass meadows around the world have declined dramatically in recent decades. Researchers and managers have been calling for increased frequency and accuracy in the mapping of seagrass distributions to benefit seagrass conservation for over a decade, and we argue that a critical advancement in the management of seagrasses could come through increased and iterative model-based mapping of potential habitat as an accessory to seagrass monitoring. We further demonstrate how focus on errors of commission and omission during model interpretation could guide management activities, using the Texas Gulf Coast as a case study representing seagrass habitats worldwide. We used the species distribution modeling program Maxent to predict the location of suitable habitat for each seagrass species along the Texas Coast based on local current velocity, distance from boat launches (i.e., an index of human disturbance), nitrogen, light availability, salinity, and temperature. Models accurately predicted suitable habitat for all seagrass species, including Halodule wrightii (AUC = 0.830 ± 0.032), Thalassia testudinum (AUC = 0.901 ± 0.058), Syringodium filiforme (AUC = 0.911 ± 0.036), Halophila engelmannii (AUC = 0.865 ± 0.092), and Ruppia maritima (AUC = 0.868 ± 0.040). The relative importance of environmental factors differed between models. Distributions for H. wrightii and T. testudinum were most influenced by surface nitrate concentrations. S. filiforme, H. engelmannii, and R. maritima distributions were most influenced by benthic light availability. Human disturbances often lead to elevated nitrate concentrations and decreased benthic light availability, and our models generally predicted a lack of suitable habitat near sites characterized by abundant human development. We considered model errors of commission and omission for each species to identify candidate regions for seagrass transplantation and habitat restoration, respectively. Overall, we believe that the utility of the approach we have developed in the Texas Gulf Coast case study along extends beyond a single study site, and our methods will assist conservation of seagrass meadows worldwide.

The influence of seagrass donor source on small‐scale transplant resilience

Abstract Concern for conservation of seagrass habitat has prompted international transplantation‐style restoration efforts. A recent review of these restoration efforts has highlighted the low success associated with small‐scale restorations, yet scaling up transplantation effort may be too costly for underfunded regions. Small‐scale transplant survival can be enhanced with alleviation of two underlying issues: restoration site selection and donor site selection. To investigate appropriate donor source selection, donor site environmental influence on seagrass (Halodule wrightii) transplant survival was examined by transplanting donor cores from two environmentally disparate sites to a transplantation site with limited environmental uncertainties. Donor sites were chosen to represent either end of a benthic light gradient (high versus low) to elucidate seagrass resilience to transplantation stress, with respect to donor site conditions. After total loss of the first trial, a second trial was conducted with stabilizing mesh placed over transplants to reduce stingray bioturbation. The second trial resulted in 100% survival of high light transplants after 12 months and moderate survival (30–60%) of low light transplants for the first six months. At 18 months, the second trial ended after sediment burial from a hurricane. One year post‐burial, a patch of H. wrightii recovered at the high light transplant site; after six years the patch expanded to approximately 74 m2, an area 37‐fold larger than originally planted. Results from this transplant experiment provide evidence that donor environment plays a role in transplant resilience. The transplants sourced from high light had 47% greater leaf area per shoot, were more resistant to transplantation stress, and recovered following an extreme event relative to low light transplants. Therefore, selection of donor plants with more resilience features, a transplantation site with limited environmental uncertainties, and adaptive intervention can enhance seagrass resilience at a small planting scale.

Annual benthic irradiance levels at the Northwestern Cuban shelf

This study, aimed at determining the average annual benthic light irradiance in the northwestern shelf to later calculate its macrophytobenthos total primary production, is the first and only one ever conducted on this subject in Cuban waters to date. Organic mud constitutes 39% of all bottom types, sand is 37%, and the remaining 24% is made up of carbonate mud, hard bottom, rubble, coral, and their combinations. The water average depth is 7.9 m (2 to 28 m range), with an average color 6 (2 to 14 range) in the Forel-Ule scale. Average water temperatures are 28.1 ºC at bottom, and 28.4 ºC at 0.5 m depth, indicating a well-mixed water column; the average bottom water currents speed of 0.116 m s−1 is unremarkable. Visible down to bottom in 73% of all stations, the average Secchi disk depth is 7.1 m (90% transparency) at the remaining 27% stations. The value of the diffuse attenuation coefficient of down welling irradiance “k” is affected by the hour of day, seasons, water color, runoffs, distance from the coast, and depth where it is determined. With an average surface-to-bottom “k” (k0−bottom) value of 0.13 m−1, this shelf water is 34% less transparent than nearby open ocean water. The bottom light illumination is 49% of that at surface, allowing an instantaneous irradiance energy at bottom of 0.31 kW m−2, which is almost twice the average energy most abundant macrophytobenthos species require to reach maximum photosynthesis rates.

Correction to: Impacts of Suspended Sediment on Nearshore Benthic Light Availability Following Dam Removal in a Small Mountainous River: In Situ Observations and Statistical Modeling

In the original article the following disclaimer is missing.

Ecosystem engineering by a canopy‐forming kelp facilitates the recruitment of native oysters

Ecosystem engineers are species that influence the abiotic and biotic environment around them and may assist the restoration of associated species, including other habitat‐forming species. We deployed an array of 28 artificial reefs with transplanted Ecklonia radiata, the dominant canopy‐forming kelp species across southern Australia, to investigate how the patch size and density of E. radiata influenced the establishment of the associated communities of plants and animals. Many of the reefs were rapidly colonized by Ostrea angasi, a critically depleted reef‐forming oyster. Over the 24‐month deployment of the reefs, thick oyster mats formed across the entire surface of many of the reefs with estimated biomass densities exceeding 5 kg of live oysters/m2; however, oyster density was dependent on E. radiata patch size and density. Increasing patch size and the presence of kelp resulted in significantly higher densities of oysters 5 months after the reefs were deployed and at the end of the experiment, where oysters were approximately three times more numerous on reefs with kelp compared to those without kelp. E. radiata appeared to facilitate the establishment of O. angasi largely through its capacity to reduce benthic light and thus suppress competition from turfing algae. These results may inform the development of novel approaches to tackle recruitment bottlenecks affecting the restoration of O. angasi reefs.

Impacts of Suspended Sediment on Nearshore Benthic Light Availability Following Dam Removal in a Small Mountainous River: In Situ Observations and Statistical Modeling

The 2011–2014 removal of two dams from the Elwha River, WA, delivered ~ 19 Mt of sediment to the marine environment, creating an opportunity to study the sensitivity of a coastal ecosystem to large-scale sediment input. Macroalgae, the primary habitat-forming species in the nearshore, disappeared from the region. It was hypothesized that this mortality event was caused by a reduction in benthic light availability due to increased turbidity. To investigate this connection, nearshore processes and benthic light availability were monitored at 7 locations along the 10-m isobath in 2016 and 2017. The primary driver of light attenuation was suspended sediment, with measured chlorophyll-a and CDOM concentrations contributing < 15% to observed attenuation values. A Bootstrap-aggregated Regression Tree was trained to predict attenuation from the in situ data. Light attenuation was impacted by both sediment transport in the river plume, represented in the model by fluvial suspended sediment load and tidal current direction, and subsurface resuspension, represented by wave height and bed shear velocity. The models were used to hindcast light availability during the dam removal. Total daily benthic light availability was below the 1–2 mol photons/m2/day threshold for macroalgae growth consistently in 2013 and seasonally in 2012 and 2014, supporting the hypothesis that reduced light availability caused the mortality event. Light availability increased in 2016–2017 as the annual sediment load decreased, and macroalgae were concurrently observed in the region. Predicting benthic light availability over event, tidal, and seasonal timescales by accounting for both near-surface and subsurface attenuation will improve management strategies designed to limit ecosystem damage during sediment delivery events.

Water Column Optical Properties of Pacific Coral Reefs Across Geomorphic Zones and in Comparison to Offshore Waters

Despite the traditional view of coral reefs occurring in oligotrophic tropical conditions, water optical properties over coral reefs differ substantially from nearby clear oceanic waters. Through an extensive set of optical measurements across the tropical Pacific, our results suggest that coral reefs themselves exert a high degree of influence over water column optics, primarily through release of colored dissolved organic matter (CDOM). The relative contributions of phytoplankton, non-algal particles, and CDOM were estimated from measurements of absorption and scattering across different geomorphic shallow-water reef zones (&lt;10 m) in Hawaii, the Great Barrier Reef, Guam, and Palau (n = 172). Absorption was dominated at the majority of stations by CDOM, with mixtures of phytoplankton and CDOM more prevalent at the protected back reef and lagoon zones. Absorption could be dominated by sediments and phytoplankton at fringing reefs and terrestrially impacted sites where particulate backscattering was significantly higher than in the other zones. Scattering at three angles in the backward direction followed recent measurements of the particulate phase function. Optical properties derived from satellite imagery indicate that offshore waters are consistently lower in absorption and backscattering than reef waters. Therefore, the use of satellite-derived offshore parameters in modeling reef optics could lead to significant underestimation of absorption and scattering, and overestimation of benthic light availability. If local measurements are not available, average optical properties based on the general reef zone could provide a more accurate means of assessing light conditions on coral reefs than using offshore water as a proxy.

Spatiotemporal variation in the sign and magnitude of ecosystem engineer effects on lake ecosystem production

AbstractEcosystem engineers can have diverse and conflicting effects on their ecosystems, and the balance between these effects can depend on the physical environment. This context dependence means that environmental variation can produce large differences in engineer effects through space and time. Here, we explore how local variability in environmental conditions can lead to large spatiotemporal variation in the effect of tube‐building midges on benthic ecosystem metabolism in a shallow subarctic lake. Using field experiments, we found that midge engineering increases both gross primary production (GPP) and respiration (RESP) in the sediment. Gross primary production and RESP have opposing influences on net ecosystem production, and the net effect of midges on the benthic ecosystem depends on the balance between their effects on GPP and RESP. Variation in light mediates this balance—under high light conditions, primary producers are able to exploit the structural benefits provided by midges, while in the dark, the elevation of respiration from midge engineering predominates. Benthic light levels vary spatially and temporally due to episodic cyanobacterial blooms that prevent almost all light from reaching the benthos. By quantifying the nonlinear relationship between midge engineering and light, we were able to project ecosystem‐wide consequences of natural variation in light conditions across the lake. Our results illustrate how the sign and magnitude of ecosystem‐wide effects of ecosystem engineers can vary through space and time.

Light availability for reef-building organisms in a plume-influenced shelf

The existence of a reef system composed by crustose coralline algae and scleractinian corals, under the influence of the world's largest freshwater plume, led us to investigate how much light is available for reef-building organisms at the bottom of the Amazon shelf. We analyzed ocean color data from MODIS Aqua to assess the plume dynamics and estimate the benthic light availability over the Amazon shelf. These methods may be applied to other river-dominated shelves. Four zones were detected regarding the bottom light regime. The seasonal changes of the dynamic forcing over the shelf reflect little in the light parameters over the Amazon shelf. Three zones presented constant light regimes along the year: dark coastal zone under the permanent influence of the plume; dim-light zone in the deeper northern shelf; and high-light zone in the shallower southern shelf. Only one zone presented a seasonally changing benthic light regime, and it was located under the seasonally variable edge of the plume over the northern mid-to-outer shelf. The minimum light level estimated in the deeper dim-light zone was ∼2 μE m−2 s−1 which is sufficient for reef-building organisms to thrive. The cause of the incipient living coverage and low vitality of crustose coralline algae, previously reported in the northern shelf, cannot be attributed to a lack of light, but might be related to sedimentation processes associated to the plume. Thus, the potential, in terms of light, for reef builders to develop along this and other river-influenced margins is much greater than previously anticipated.

Light penetration in a temperate meso-tidal lagoon: Implications for seagrass growth and dredging in Tauranga Harbour, New Zealand

Benthic plants such as seagrasses rely on light availability, which is controlled by light attenuation in the water column. Elevated suspended sediment within estuaries strongly influences light attenuation and is governed by the recent history of natural events and human activities. To determine the constituents controlling light penetration (quantified by the irradiance attenuation coefficient, Kd(PAR)), we measured irradiance profiles, suspended particulate matter, chlorophyll-a and coloured dissolved organic matter (CDOM) in a barrier-enclosed estuary in New Zealand, subjected to dredging activity. These discrete measurements were then used to relate a continuous records of turbidity to potential light availability at multiple sites within the estuary. To do this, we use a regression model to enable turbidity measurements to be used as a proxy to estimate Kd(PAR). Measured Kd(PAR) ranged from 0.16 m-1 to 0.98 m-1 with overall average of 0.40 m-1, while Kd(PAR) inferred from continuous turbidity (which included many more events) reached higher values with average of 0.63 m-1. Continuous measurements of turbidity taken around the harbour dredging sites during dredging were slightly higher at some sites and slightly lower at others (∼2 mg l−1) compared to background measurements, indicating dredging had no consistent effect on conditions. Variations in Kd(PAR) were explained mostly by suspended particulate matter (accounting for 38%–50% of variance), chlorophyll-a (explaining 25%–33%) and to a lesser extent by coloured dissolved organic matter (CDOM explaining 10%–28%). Inferred benthic light availability in the intertidal zone when immersed ranged from 28% to 76% of surface irradiance, suggesting that light availability in the intertidal zone is not limiting seagrass photosynthesis but that growth in subtidal areas such as channels may be impacted. Results, inferred from continuous turbidity measurements, demonstrate the critical importance of including storm events in monitoring to develop robust limits on light attenuation for management.