Innate and adaptive immune responses that prime myeloid cells, such as macrophages, protect against pathogens1,2. However, if left uncontrolled, these responses may lead to detrimental inflammation3. Thus macrophages, particularly those resident in tissues, must remain quiescent in between infections despite chronic stimulation by commensal microbes. The genes required for quiescence of tissue resident macrophages are not well understood. Autophagy, an evolutionarily conserved cellular process by which cytoplasmic contents are targeted for lysosomal digestion, has homeostatic functions including maintenance of protein and organelle integrity and regulation of metabolism4. Recent work has shown that degradative autophagy, as well as various combinations of autophagy genes, regulates immunity and inflammation5–12. Here, we delineate a role for the autophagy proteins Beclin 1 and FIP200, but not of other essential autophagy components ATG5, ATG16L1, or ATG7, in mediating quiescence of tissue-resident macrophages by limiting systemic interferon-γ (IFNγ) effects. Perturbation of quiescence in mice lacking Beclin 1 or FIP200 in myeloid cells results in spontaneous immune activation and resistance to Listeria monocytogenes infection. While antibiotic treated wild-type mice display diminished macrophage responses to inflammatory stimuli, this is not observed in mice lacking Beclin 1 in myeloid cells, establishing the dominance of this gene over effects of the bacterial microbiota. Thus, select autophagy genes, but not degradative autophagy, have a key role in maintaining immune quiescence of tissue resident macrophages, resulting in genetically programmed susceptibility to bacterial infection.
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