You have accessJournal of UrologyCME1 May 2022PD12-10 URINE COMPREHENSIVE GENOMIC PROFILING OF UROTHELIAL CARCINOMA PATIENTS UNDERGOING INTRAVESICAL THERAPY ENABLES DETECTION OF ACTIONABLE DNA MUTATIONS ASSOCIATED WITH DRUG RESPONSE AND RISK STRATIFICATION Goran Rac, Shalin Desai, Hiten D. Patel, Chirag Doshi, Ryan Dornbier, Vincent Caruso, Peter Lentz, Brian C. Mazzarella, Kevin G. Phillips, Trevor Levin, Alan J. Wolfe, and Gopal N. Gupta Goran RacGoran Rac More articles by this author , Shalin DesaiShalin Desai More articles by this author , Hiten D. PatelHiten D. Patel More articles by this author , Chirag DoshiChirag Doshi More articles by this author , Ryan DornbierRyan Dornbier More articles by this author , Vincent CarusoVincent Caruso More articles by this author , Peter LentzPeter Lentz More articles by this author , Brian C. MazzarellaBrian C. Mazzarella More articles by this author , Kevin G. PhillipsKevin G. Phillips More articles by this author , Trevor LevinTrevor Levin More articles by this author , Alan J. WolfeAlan J. Wolfe More articles by this author , and Gopal N. GuptaGopal N. Gupta More articles by this author View All Author Informationhttps://doi.org/10.1097/JU.0000000000002538.10AboutPDF ToolsAdd to favoritesDownload CitationsTrack CitationsPermissionsReprints ShareFacebookLinked InTwitterEmail Abstract INTRODUCTION AND OBJECTIVE: Prediction of intravesical therapy (IVT) response and risk stratification in patients with urothelial carcinoma (UC) remains a challenge. Previous attempts using biomarkers have not gained broad adoption. Urinary comprehensive genomic profiling (uCGP) has significant potential to aid in both quantitative assessment of therapeutic response and risk stratification. METHODS: uCGP was performed on 26 prospectively enrolled patients undergoing IVT induction (BCG=88%, Gemcitabine=12%). Samples were collected after visually complete TURBT immediately prior to IVT instillation. Urine DNA was sequenced and profiled across 60 genes using the CLIA-validated UroAmplitude test (Convergent Genomics). Recurrence predictions were performed using a previously validated algorithm. Subjects were grouped into high, intermediate, and low risk of recurrence. RESULTS: Stage distribution was Tis (15%), Ta (23%), T1 (62%). Mean follow-up after IVT was 22 months. Among samples analyzed, 25% contained no detectable mutations while 75% contained ≥1 high confidence mutation. The high and intermediate risk classification identified 100% of pathologically confirmed recurrence. Among low recurrence risk classifications, no clinical recurrence was identified within follow-up (100% NPV). TP53 mutations were strongly correlated with post-treatment recurrence OR=28, 95%CI (1.99, 394.42), p=0.038. Two subjects had detected aneuploidy post-treatment and had T1 recurrence, supporting earlier observations of aneuploidy correlating with invasive cancer. CONCLUSIONS: uCGP is a quantitative diagnostic with potential to identify therapeutic response. Low risk patients have low mutation burden prior to treatment, intermediate risk have notable disease burden pre-treatment with notable reduction after IVT, and high risk do not respond to treatment. These data suggest that uCGP performed before and after IVT has significant potential to stratify recurrence risk in non-muscle invasive UC patients. Additional studies are underway to further support the generalizability of these findings. Source of Funding: Support for this research is provided by the NCI through a SBIR Grant, 5R44CA200174, provided to Convergent Genomics © 2022 by American Urological Association Education and Research, Inc.FiguresReferencesRelatedDetails Volume 207Issue Supplement 5May 2022Page: e199 Advertisement Copyright & Permissions© 2022 by American Urological Association Education and Research, Inc.MetricsAuthor Information Goran Rac More articles by this author Shalin Desai More articles by this author Hiten D. Patel More articles by this author Chirag Doshi More articles by this author Ryan Dornbier More articles by this author Vincent Caruso More articles by this author Peter Lentz More articles by this author Brian C. Mazzarella More articles by this author Kevin G. Phillips More articles by this author Trevor Levin More articles by this author Alan J. Wolfe More articles by this author Gopal N. Gupta More articles by this author Expand All Advertisement PDF DownloadLoading ...