Arid Habitats Research Articles

Microbial landscapes in Trinervitermes trinervoides termite colonies are affected by mound compartments and soil properties but not by symbiotic Podaxis fungi

Termites are important ecosystem engineers and play key roles in modulating microbial communities within and outside their mounds. Microbial diversity within termite mounds is generally lower than surrounding soils, due to termite-associated antimicrobial compounds and active sanitary behaviours. Microbial symbionts of termites can also influence the microbial landscape, by inhibiting or out-competing other microbes. Certain members of the arid habitat fungal genus Podaxis (Agaricomycetes; Agaricaceae) are symbiotic with savannah specialist grass-cutting termites, with the potential to influence mound-associated microbiomes. To test this, we characterized fungal (ITS2) and bacterial (16S rRNA) communities within and outside 49 Trinervitermes trinervoides mounds with and without Podaxis fruiting bodies across a 1000 km transect in South Africa. We predicted that Podaxis would be a dominant member of the fungal communities in mounds and negatively impact microbial diversity. Further, we explored how environmental variables shaped microbial communities, including whether soil elemental composition affected Podaxis presence. As expected, we observed less diverse fungal communities, but not bacterial communities, within than outside mounds, while microbial communities differed by sampling regions and mound compartments. Podaxis sequences were present in 48 out of 49 mounds in low relative abundances, and neither fruiting body presence nor sequence abundance were associated with microbial community diversity or composition. There was, however, an overall association between the presence of Podaxis fruiting bodies and elemental composition, with different elements displaying varying associations depending on geographic region. Both environmental variables and soil elements associated with fungal and bacterial taxa, indicating that they are key drivers of microbial community composition. Taken together, our findings suggest that microbial landscapes in termite mounds are not strongly influenced by Podaxis but mainly driven by termite filtering and regional abiotic variables and elemental compositions.

Effects of different surface water flow frequencies on water use characteristics of Tamarix ramosissima in the hinterland of the Taklamakan Desert

Tamarix ramosissima is a dominant species in desert ecosystems and an ecological barrier species in arid areas, playing a crucial role in stabilizing dunes and preventing desertification. In this study, river water, groundwater, soil water, and T. ramosissima individual samples were collected from three sites in July and October 2023 at the Daliyaboyi Oasis located at the tail of the Kriya River in the hinterland of the Taklamakan Desert. The three sites are referred to as the center (SE), west (SW), and north (SN) sites within the Daliyaboyi Oasis, and each experienced different flood frequencies. The SE site experienced flooding in July and October, the SW site experienced flooding only in July, and the SN site experienced no flooding in July or October. The spatial and temporal variation in hydrogen and oxygen stable isotopes and line-conditional excess (lc-excess) in water and plant samples were analyzed, and the potential changes in water use of T. ramosissima were analyzed by the hydrogen and oxygen stable isotope and MixSIAR model. The findings indicated that the slope of SWL at the SE, SW, and SN sites was higher in July (6.77, 6.42, and 3.05, respectively) than in October (7.37, 3.30, and 2.14, respectively). The lc-excess value of the SE site did not exhibit seasonal changes; only the lc-excess values of soil water in SW and SN sites showed seasonal changes. MixSIAR results indicated frequent flood events at the SE site, with relatively constant proportions of water source utilization by T. ramosissima in July and October. In addition, shallow soil water (0–60 cm) and deeper soil water (60–80 cm) were the main water sources of T. ramosissima at SE. The SN site was slightly influenced by surface water, resulting in statistically non-significant changes in the water source utilization by T. ramosissima. Indeed, deep soil water (60–200 cm) and groundwater were the sources of water for T. ramosissima at this site. In contrast with October, the SW site experienced flood events in July, resulting in the utilization of water by T. ramosissima from the shallow soil (0–60 cm) and deep soil (60–280 cm) in July and October, respectively. Different surface water flow patterns led to different water use characteristics of T. ramosissima, which further demonstrated that T. ramosissima has high resilience and ecological plasticity. This work provides a useful reference for the implementation of effective ecological water transport measures in the Daliyaboyi Oasis and similar arid habitats.

Evolution of gene networks underlying adaptation to drought stress in the wild tomato Solanum chilense.

Drought stress is a key limitation for plant growth and colonization of arid habitats. We study the evolution of gene expression response to drought stress in a wild tomato, Solanum chilense, naturally occurring in dry habitats in South America. We conduct a transcriptome analysis under standard and drought experimental conditions to identify drought-responsive gene networks and estimate the age of the involved genes. We identify two main regulatory networks corresponding to two typical drought-responsive strategies: cell cycle and fundamental metabolic processes. The metabolic network exhibits a more recent evolutionary origin and a more variable transcriptome response than the cell cycle network (with ancestral origin and higher conservation of the transcriptional response). We also integrate population genomics analyses to reveal positive selection signals acting at the genes of both networks, revealing that genes exhibiting selective sweeps of older age also exhibit greater connectivity in the networks. These findings suggest that adaptive changes first occur at core genes of drought response networks, driving significant network re-wiring, which likely underpins species divergence and further spread into drier habitats. Combining transcriptomics and population genomics approaches, we decipher the timing of gene network evolution for drought stress response in arid habitats.

Speciation in the desert: A new endemic Iberus land snail restricted to the southeastern Iberian Peninsula

Arid habitats constitute harsh environments for hydrophilic animals such as land snails. Still, several land snail species appear to inhabit arid environments and such species present an array of adaptations needed to minimise water loss in dry habitats. However, different species may have found different solutions for the same problem. Here, we describe Iberus xerophilus sp. nov., a new species of arid-dwelling land snail from southeastern Spain, on the basis of phylogenetic analyses. Moreover, we show a detailed morphological description as well as a characterization of its habitat. A comparison with the shell morphology of other aridity resistant Iberus land snails casts the question of how this snail can succeed in such harsh arid environments. Southeastern Spain constitutes a hotspot for Iberus arid-dwelling species, displaying a plethora of shell morphologies. The description of this new species might contribute to our understanding of the evolution and diversification of land snails specifically adapted to drought and arid conditions.

Hydraulic mechanism of limiting growth and maintaining survival of desert shrubs in arid habitats.

The growth and survival of woody plant species is mainly driven by evolutionary and environmental factors. However, little is known about the hydraulic mechanisms that respond to growth limitation and enable desert shrub survival in arid habitats. To shed light on these hydraulic mechanisms, 9-, 31-, and 56-year-old Caragana korshinskii plants that had been grown under different soil water conditions at the southeast edge of the Tengger Desert, Ningxia, China were used in this study. The growth of C. korshinskii was mainly limited by soil water rather than shrub age in non-watered habitats, which indicated the importance of maintaining shrub survival prior to growth under drought. Meanwhile, higher vessel density, narrower vessels and lower xylem hydraulic conductivity indicated that shrubs enhanced hydraulic safety and reduced their hydraulic efficiency in arid conditions. Importantly, xylem hydraulic conductivity mediated by variation in xylem hydraulic architecture regulated photosynthetic carbon assimilation and growth of C. korshinskii. Our study highlights that the synergistic variation in xylem hydraulic safety and hydraulic efficiency is the hydraulic mechanism limiting growth and maintaining survival of C. korshinskii under drought, providing insights into the strategies for growth and survival of desert shrubs in arid habitats.

Variation in nest survival of three species of tropical plovers in Madagascar with clutch size, age of nest, year and El Niño effect.

A combination of life history traits and environmental conditions has been highlighted as the main drivers of avian breeding success. While drivers of breeding success are well known in some species, especially birds in northern, temperate regions; species in other parts of the world have received relatively little attention. In this study, we used a long-term dataset on breeding success of tropical plovers from south-west Madagascar to investigate whether nest survival changed over time and whether the drivers of nest survival were similar for multiple species breeding in the same arid habitat. In the 12-year period of 2009-2020, we monitored 2077 nests for three species with different breeding strategies: 1185 nests of Kittlitz's plovers (Anarhynchus pecuarius) with a flexible breeding strategy and uniparental care; and 565 nests of white-fronted plovers (A. marginatus) and 327 nests of Madagascar plovers (A. thoracicus) which both have biparental care. We found that nest survival was associated with a combination of clutch-size, age of nest and year among the three plover species. In addition, annual variation in climatic conditions associated with El Niño/La Niña events were included in the most supported survival models for Kittlitz's and white-fronted plovers, but the effects were not significant. Overall estimates of daily nest survival were similar for all three species: Kittlitz's plover: 0.950 ± 0.002 SE, Madagascar plover: 0.919 ± 0.007 SE, and white-fronted plover: 0.862 ± 0.047 SE. Estimates of nest success for the breeding season, based on increases in daily nest survival with the clutch age during the incubation periods (26 days for Kittlitz's plovers and 29 days for Madagascar and white-fronted plovers), were relatively low: Kittlitz's plover: 0.161 ± 0.056 SE, Madagascar plover: 0.287 ± 0.022 SE, and white-fronted plover: 0.228 ± 0.019 SE. All three species had a combination of factors affecting nest survival, both environmental and life history traits.

Modulating Vertebrate Physiology by Genomic Fine-Tuning of GPCR Functions.

G protein-coupled receptors (GPCRs) play a crucial role as membrane receptors, facilitating the communication of eukaryotic species with their environment and regulating cellular and organ interactions. Consequently, GPCRs hold immense potential in contributing to adaptation to ecological niches and responding to environmental shifts. Comparative analyses of vertebrate genomes reveal patterns of GPCR gene loss, expansion, and signatures of selection. Integrating this genomic data with insights from functional analyses of gene variants enables the interpretation of genotype-phenotype correlations. This review underscores the involvement of GPCRs in adaptive processes, presenting numerous examples of how alterations in GPCR functionality influence vertebrate physiology, or conversely, how environmental changes impact GPCR functions. The findings demonstrate that modifications in GPCR function contribute to adapting to aquatic, arid, and nocturnal habitats, influencing camouflage strategies, and specializing in particular dietary preferences. Furthermore, the adaptability of GPCR functions provides an effective mechanism in facilitating past, recent, or ongoing adaptations in animal domestication and human evolution and should be considered in therapeutic strategies and drug development.

Associations among MHC genes, latitude, and avian malaria infections in the rufous-collared sparrow (Zonotrichia capensis).

The major histocompatibility complex (MHC) is a genetic region in jawed vertebrates that contains key genes involved in the immune response. Associations between the MHC and avian malaria infections in wild birds have been observed and mainly explored in the Northern Hemisphere, while a general lack of information remains in the Southern Hemisphere. Here, we investigated the associations between the MHC genes and infections with Plasmodium and Haemoproteus blood parasites along a latitudinal gradient in South America. We sampled 93 rufous-collared sparrows (Zonotrichia capensis) individuals from four countries, Colombia, Ecuador, Peru, and Chile, and estimated MHC-I and MHC-II allele diversity. We detected between 1-4 (MHC-I) and 1-6 (MHC-II) amino acidic alleles per individual, with signs of positive selection. We obtained generalized additive mixed models to explore the associations between MHC-I and MHC-II diversity and latitude. We also explored the relationship between infection status and latitude/biome. We found a non-linear association between the MHC-II amino acidic allele diversity and latitude. Individuals from north Chile presented a lower MHC genetic diversity than those from other locations. We also found an association between deserts and xeric shrublands and a lower prevalence of Haemoproteus parasites. Our results support a lower MHC genetic in arid or semi-arid habitats in the region with the lower prevalence of Haemoproteus parasites.

Diversification of Camphorosmeae (Amaranthaceae s.l.) during the Miocene-Pliocene aridification of inland Australia

The Australian Camphorosmeae represent a monophyletic lineage that diversified to include ca. 150 spp. across 12 genera, and populate large parts of arid Australia. Tracking the origin and spread of this ancestrally salt and drought tolerant lineage provides additional evidence about the timing of the evolutionary history and phylogenetic assembly of arid habitats in Australia. Using a customized RADseq approach, sequence data for 104 species of the Australian Camphorosmeae representing all 12 genera were generated and included in phylogenetic and dating analyses. Furthermore, habitat type occurrences and preferences of species and clades were recorded. As suspected, the characters used to delimit current Australian Camphorosmeae genera do not support monophyletic groups, as phylogenetic analyses yielded 17 statistically supported clades across a large Maireana grade and crown radiation of Sclerolaena. The diversification of Australian Camphorosmeae is clearly linked to landscape changes and emerging new habitat types in arid Australia since the ancestral element likely arrived from temperate semi-arid to arid parts of continental Eurasia in the Middle Miocene. Migration was likely multidirectional and followed a west-to-east aridification. Crown group diversification was strongest during the Pliocene and likely promoted by the west-to-east expansion of Riverine Desert habitats and subsequent expansion and colonization of newly developing arid habitats. Rapid range expansion, fast habitat saturation, as well as periodic expansion, contraction and replacement of arid habitats, may have caused the rather species-poor clades of the earlier-divergent Maireana grade, compared to the continuously diversifying Sclerolaena clade.

Radiation-resistant bacteria in desiccated soil and their potentiality in applied sciences.

A rich diversity of radiation-resistant (Rr) and desiccation-resistant (Dr) bacteria has been found in arid habitats of the world. Evidence from scientific research has linked their origin to reactive oxygen species (ROS) intermediates. Rr and Dr. bacteria of arid regions have the potential to regulate imbalance radicals and evade a higher dose of radiation and oxidation than bacterial species of non-arid regions. Photochemical-activated ROS in Rr bacteria is run through photo-induction of electron transfer. A hypothetical model of the biogeochemical cycle based on solar radiation and desiccation. These selective stresses generate oxidative radicals for a short span with strong reactivity and toxic effects. Desert-inhibiting Rr bacteria efficiently evade ROS toxicity with an evolved antioxidant system and other defensive pathways. The imbalanced radicals in physiological disorders, cancer, and lung diseases could be neutralized by a self-sustaining evolved Rr bacteria antioxidant system. The direct link of evolved antioxidant system with intermediate ROS and indirect influence of radiation and desiccation provide useful insight into richness, ecological diversity, and origin of Rr bacteria capabilities. The distinguishing features of Rr bacteria in deserts present a fertile research area with promising applications in the pharmaceutical industry, genetic engineering, biological therapy, biological transformation, bioremediation, industrial biotechnology, and astrobiology.

Decomposition of Foliar Litter from Dominant Plants of Desert Riparian Forests in Extremely Arid Regions

Litter decomposition is important for understanding the effects of habitat on nutrient cycling. In this study, we investigated the decomposition characteristics, decomposition variability, and regulatory factors restricting the decomposition rates of leaf litter in three different habitats: a flood disturbance habitat, an arid habitat, and a high-salinity habitat. The litter decomposition rates of the habitats decreased in the following order: flood disturbance habit > arid habitat > high-salinity habitat. The organic carbon, total nitrogen, and lignin residues of the litter during the decomposition period were highest in the high-salinity habitat. The litter quality was the main regulator of the release of phosphorus and cellulose residues, which exhibited different release processes and patterns in these three habitats. The litter decomposition coefficient was negatively correlated with litter carbon residue in the flood disturbance habitats, the lignocellulose index in the arid habitats, and soil urease in the high-salinity habitats. It was positively correlated with the lignocellulose index in flood disturbance habitats and litter carbon residue in high-salinity habitats. The litter quality in the flood disturbance area played a significant role in litter decomposition, while environmental quality and litter quality were the dominant factors under arid and high-salt conditions. Litter quality in the flood disturbance area played a significant role in litter decomposition, while both environmental quality and litter quality were the dominant factors under arid and salt conditions.

Open-cup nesters in the Kalahari: Incubation and egg-shading behaviour in passerines cannot be detected with temperature dataloggers during hot periods

Birds that build open-cup nests in semi-arid or arid habitats have difficulty in maintaining clutch temperatures during incubation in a suitable incubation range due to high air temperatures and solar radiation, resulting in either embryo death or behavioural responses to preserve clutch viability. We investigated how Southern Fiscals (Lanius collaris), open-cup nesting passerines with female-only incubation in the Kalahari basin, allocated time for self-care (off-bouts) and incubation (on-bouts) and whether egg shading, a previously described behaviour in this species, is a widespread response during hot periods. We used a dual approach combining temperature dataloggers in the nest and behavioural observations during the hottest hours of the day. We found that in the early morning and late evening, Southern Fiscals behaved similarly to species incubating in temperate habitats by alternating off- and on-bouts, but during the hottest hours of the day, shading became the main activity. Behavioural observations were key to describing this behaviour indicating that it is necessary to combine different data collection strategies to successfully assess the behaviour of open-cup nesters in hot environments.

Interspecific Sharing of Closely Related Chloroplast Genome Haplotypes among Sclerophyllous Oaks in the Hot-Dry Valley of the Jinsha River, Southwestern China

Evergreen sclerophyllous oak forests (ESOFs) in southwestern China are a special vegetation type developed in response to the expansion of arid habitats after the uplift of the Himalayas. Here, we used chloroplast (cp) DNA and nuclear ribosomal (nr) DNA to investigate the fine-scale genetic variation patterns of six sympatric oaks (Quercus, Fagaceae) in the hot-dry valley ESOFs of the Jinsha River, southwestern China. Three cp genomes were assembled for each species. Nine cp genome haplotypes and 16 nrDNA haplotypes were identified based on single-nucleotide variants and indels. Our results demonstrated that discordance existed between the cpDNA and nrDNA phylogenies of the sclerophyllous oaks in section Ilex. The nrDNA phylogeny was consistent with species boundaries, while the cpDNA phylogeny was decoupled from taxonomy. Interspecific sharing of closely related cp genome haplotypes was detected between Quercus cocciferoides and the other two sclerophyllous oaks, Q. longispica and Q. franchetii. Specifically, Q. cocciferoides and Q. longispica sampled in a mixed stand exhibited two haplotypes that differed by a 9 bp indel. The local distribution of the two highly similar haplotypes suggested that they may have arisen from ancient introgression. Given that the two species have diverged for a long time, it is possible that the ancestral cp genome of one species was captured by another species through asymmetric introgression in early times, and an indel event occurred subsequently. Phylogenetic analyses using more previously published cp genome sequences indicated that Q. cocciferoides and Q. franchetii shared multiple cpDNA lineages of Ilex oaks, which may be caused by shared ancestral polymorphism and/or ancient introgression. Our study showed that at least three highly variable regions (ψycf1, ndhF-rpl32, and trnKUUU-rps16 or rpl32-trnLUAG) can distinguish the nine haplotypes identified by whole-cp genome sequences. These markers are useful for the evolutionary studies of the maternal lineages of oaks in hot-dry valley ESOFs.

Eurasian drylands are both evolutionary cradles and museums of Nitrariaceae diversity

AbstractAimDrylands cover about 41% of Earth's land surface and are home to fragile biota with high levels of endemism. Two hypothetical models, i.e., cradle and museum, have been proposed to account for present‐day species diversity in an ecoregion or biome. We investigated macroevolutionary patterns to test these two different models in Nitrariaceae, a characteristic component of the Eurasian dryland ecosystem. We also used this family to explore the intercontinental disjunct distribution pattern between the deserts of Eurasia and western North America, known as the Madrean–Tethyan disjunction.LocationDrylands in the Northern Hemisphere.TaxonNitrariaceae (Sapindales, Angiosperms).MethodWe sampled all 16 of the currently recognized extant species of Nitrariaceae and 59 species from the eight other families of Sapindales. A fossil‐calibrated phylogeny was generated using 12 fossil constraints. The ancestral range and climate niche of Nitrariaceae were reconstructed, and diversification rates were estimated.ResultsThe most recent common ancestor of Nitrariaceae likely inhabited arid habitats with low rainfall in the temperate zone in the Late Cretaceous, which geographically corresponds to present‐day Central Asia. The western North American Peganum mexicanum split from its Central Asian sister group at approximately 39 Ma. Net diversification rates of Nitrariaceae experienced a significant increase around 11 Ma. Within Sapindales, at least seven arid species originated markedly prior to the Miocene.Main ConclusionsThe North Atlantic land bridge and global cooling climate in the Late Eocene might have driven the formation of the present‐day disjunct distribution of Nitrariaceae between arid Central Asia and western North America. Nitrariaceae originated in the Late Cretaceous and exhibited long‐term climate niche conservatism, but experienced a rapid diversification in the late Miocene of Eurasia in response to orogenetic and climatic changes. These findings suggest that Eurasian drylands serve as both evolutionary cradles and museums for the diversity of Nitrariaceae and likely for other arid‐adapted lineages.

Anatomy of a mega-radiation: Biogeography and niche evolution in Astragalus.

Astragalus (Fabaceae), with more than 3000 species, represents a globally successful radiation of morphologically highly similar species predominant across the northern hemisphere. It has attracted attention from systematists and biogeographers, who have asked what factors might be behind the extraordinary diversity of this important arid-adapted clade and what sets it apart from close relatives with far less species richness. Here, for the first time using extensive phylogenetic sampling, we asked whether (1) Astragalus is uniquely characterized by bursts of radiation or whether diversification instead is uniform and no different from closely related taxa. Then we tested whether the species diversity of Astragalus is attributable specifically to its predilection for (2) cold and arid habitats, (3) particular soils, or to (4) chromosome evolution. Finally, we tested (5) whether Astragalus originated in central Asia as proposed and (6) whether niche evolutionary shifts were subsequently associated with the colonization of other continents. Our results point to the importance of heterogeneity in the diversification of Astragalus, with upshifts associated with the earliest divergences but not strongly tied to any abiotic factor or biogeographic regionalization tested here. The only potential correlate with diversification we identified was chromosome number. Biogeographic shifts have a strong association with the abiotic environment and highlight the importance of central Asia as a biogeographic gateway. Our investigation shows the importance of phylogenetic and evolutionary studies of logistically challenging "mega-radiations." Our findings reject any simple key innovation behind high diversity and underline the often nuanced, multifactorial processes leading to species-rich clades.

Simplified microbial network reduced microbial structure stability and soil functionality in alpine grassland along a natural aridity gradient

Increasing aridity is known to influence the diversity and function of soil microbiome. However, how it affects the microbial co-occurrence network are poorly understood, particularly in alpine ecosystem, which is one of the most vulnerable ecosystems. Here, we investigated the co-occurrence networks of soil microbiomes based on 60 sites along a natural aridity gradient across the Tibetan Plateau and evaluated their relationship with soil functionality. We hypothesized that increasing aridity could lead to a reduction in the complexity of microbial networks (e.g., the decreased number of nodes and edges, lower connectance, average degree, clustering coefficient and centralization degree), and this changed network complexity is strongly relate to microbial structure stability (network robustness and vulnerability) and soil functionality. Our results supported the hypothesis that the network complexities of bacteria, fungi and protists decreased along the aridity gradient. Microbial network complexity was significantly correlated with network robustness and vulnerability, suggesting that soil network complexity supports structure stability. Bacterial and fungal network complexities were strongly related to community functional traits (e.g., enzymes activities, carbohydrate and amino acid metabolism, C degradation genes), soil processes (e.g., CO2 and CH4 emission, N mineralization) and multifunctionality. This suggests a key relationship of microbial networks to alpine soil functionality, with a more significant impact observed in semi-arid and arid habitats than that in humid and semi-humid habitats. Plants played key roles in driving microbial network through altering soil organic C, with plant diversity having a greater impact in humid habitats, while plant biomass was more influential in semi-arid and arid habitats. Our results indicate that aridity-induced simplification of microbial communities can potentially weaken community stability and alpine soil functionality. Therefore, preserving the complexity of belowground communities is critical for ecosystem management and for predicting the ecological consequences of future aridification.

The Cissus quadrangularis genome reveals its adaptive features in an arid habitat.

Cissus quadrangularis is a tetraploid species belonging to the Vitaceae family and is known for the Crassulacean acid metabolism (CAM) pathway in the succulent stem, while the leaves perform C3 photosynthesis. Here, we report a high-quality genome of C. quadrangularis comprising a total size of 679.2Mb which was phased into two subgenomes. Genome annotation identified 51 857 protein-coding genes, while approximately 47.75% of the genome was composed of repetitive sequences. Gene expression ratios of two subgenomes demonstrated that the sub-A genome as the dominant subgenome played a vital role during the drought tolerance. Genome divergence analysis suggests that the tetraploidization event occurred around 8.9million years ago. Transcriptome data revealed that pathways related to cutin, suberine, and wax metabolism were enriched in the stem during drought treatment, suggesting that these genes contributed to the drought adaption. Additionally, a subset of CAM-related genes displayed diurnal expression patterns in the succulent stems but not in leaves, indicating that stem-biased expression of existing genes contributed to the CAM evolution. Our findings provide insights into the mechanisms of drought adaptation and photosynthesis transition in plants.

Preservation of plant‐wax biomarkers in deserts: implications for Quaternary environment and human evolutionary studies

ABSTRACTAnalysis of plant‐wax biomarkers from sedimentary sequences can enable past environmental and hydrological reconstruction and provide insights into past hominin adaptations. However, biomarker preservation in desert contexts has been considered unlikely given the sparse nature of the vegetation within the landscape. Here we evaluate the preservation of n‐alkanes and fatty acids collected from four depositional sequences associated with archaeological contexts in the Nefud Desert, Saudi Arabia, and the Thar Desert, India. Pleistocene and Holocene samples were selected to understand the effects of age on preservation. The results of molecular distribution patterns and indices, particularly the high carbon preference index and average chain length, show the preservation of plant‐wax biomarkers in both the Holocene and Pleistocene desert sequences, while δ13C values and organic content provide insights into the vegetation contributing to the plant‐wax organic pool. This study provides a baseline for understanding human–environment interactions and for reconstructing changes in arid land habitats of relevance to hominins during the Quaternary.

Persistence of mule deer pellet groups on Chihuhuan Desert

The persistence of fecal or pellet groups is indispensable when using the pellet group counting technique to estimate population densities and relative abundances of deer, as well as other herbivores. This technique is widely employed worldwide, and in México, the majority of deer abundance estimates have been made using this tool. However, for mule deer (Odocoileus hemonious) in México, there is no data on the persistence of pellet groups, and there is only one study on white-tailed deer. The pellet group counting technique has two main methods: a) "Fecal Standing Crop," where the accumulated pellet groups in plots are counted in a single visit, and b) "Fecal Accumulation Rate," which estimates density based on the accumulation of new fecal groups between two sampling periods, initially requiring the removal of all fecal groups from plots and counting again after some time. Both methods require knowing the pellet group disappearance rate during the pellet group accumulation period. This information is fundamental to understanding the ecology and making precise decisions in the management and conservation of mammals, such as mule deer, a species that is declining in some regions of México. Due to the lack of studies on the persistence of pellet group of mule deer in México, the aim of this study was to determine the persistence of mule deer fecal groups and their color changes over time, to establish pellet accumulation periods for estimating population abundances without biases when using this technique in arid habitats. We monitored 102 fecal groups for four years in the Chihuahuan Desert, finding that pellet groups are only lost during the summer rainy season. All pellet groups deposited between October and May were present, and all pellet groups turned white only after the first summer rainy season. The persistence of pellet groups was similar across seasons (fall, winter, spring) and deposition years (2004 to 2006). Some pellet groups persisted for over four years. The data suggest that the only source of degradation of pellet groups is summer rains, and no degradation by biological agents, such as fungi or insects, was observed. In summary, in arid areas, to estimate deer use or density throughout the entire dry season through pellet group counting, it is suggested that only two visits with either of the mentioned techniques are needed. If "Fecal Standing Crop" is used, there is now certainty that all non-white pellets are post the summer rainy season. If the "Fecal Accumulation Rate" technique is used, there is certainty that there will be no loss of pellets groups between the accumulation period of the entire dry season, approximately 7.5 months later. By reducing the number of visits, it allows us to cover more sampling sites, expand the study area, and obtain more precise estimates that will help understand ecological aspects and make management decisions.

Fine‐scale bee species distribution models: Hotspots of richness and endemism in South Africa with species‐area comparisons

Abstract While global patterns of bee diversity have been modelled, our understanding of fine‐scale regional patterns is more limited, particularly for under‐sampled regions such as Africa. South Africa is among the exceptions on the African continent; its bee fauna (ca. 1253 species) has been well collected and documented, including mass digitising of its natural history collections. It is a region with high floral diversity, high habitat heterogeneity and variable rainfall seasonality. Here, we combine a South African bee species distributional database (877 bee species) with a geospatial modelling approach to determine fine‐scale (~11 × 11 km grid cell resolution) hotspots of bee species richness, endemism and range‐restricted species. Our analyses, based on the probabilities of occurrence surfaces for each species across 108,803 two‐minute grid cells, reveal three bee hotspots of richness: Winter rainfall, Aseasonal rainfall and Early‐to‐late summer rainfall. These hotspots contain large numbers of endemic and geographically restricted taxa. Hotspots with particularly high bee diversity include the Fynbos, Succulent Karoo and Desert biomes; the latter showing 6–20 times more species per unit area than other biomes. Our results conform with global species‐area patterns: areas of higher‐than‐expected bee density are largely concentrated in Mediterranean and arid habitats. This study further enhances our knowledge in identifying regional and global hotspots of richness and endemism for a keystone group of insects and enabling these to be accounted for when setting conservation priorities.