Brazil is the world's largest producer and exporter of green coffee. Coffee beans have intrinsic and extrinsic defects that affect their chemical composition and the consumer perception of the beverage. The aim of this work is to evaluate the impact of extrusion process in green Arabica healthy and defective coffee beans in order to increase oil yield. The chromatographic analyses of the non-processed beans showed that caffeine, diterpenes and serotonin amides did not vary between the samples (p<0.05), while moisture and ash content varied significantly. The extrusion process followed by Soxhlet was optimized using central composite rotation design (CCRD) 22. Extrusion at the point selected as optimal (68ºC and 60 rpm) proved to be efficient when applied in combination with Soxhlet extraction, causing an increase of 61–81 % of oil yield (15.29 ± 0.42 % from defective beans and 16.42 ± 0.63 % from healthy beans), while its use combined with pressing (6.99 ± 0.08 %) was not significant compared to Soxhlet extraction alone (9.05 ± 0.24 %). Caffeine, diterpenes, serotonin amides and fatty acids methyl esters (FAMES) were analyzed in the oils where most of the fatty acids showed similar percentage values (p ≤ 0.05). The total diterpene content was higher in the extruded beans, while serotonin amides varied according to healthy and defective beans and pre-treatment (for defective grains), with defective grains showing consistently higher content compared to healthy grains (p ≥ 0.05). Caffeine content was similar between the healthy extruded, defective and defective extruded grains, with the lowest content in the healthy grain. It can be concluded that extrusion is a pre-treatment with a high impact in coffee oil yield. Green coffee oil is commercially explored by cosmetics and pharmaceutical industries due to its emollient and moisturizer properties. Besides, this oil protects skin against UV radiation. These properties are related to bioactive compounds present in the lipid fraction of coffee bean as diterpene esters, fatty acids and serotonin amides, which together justify this study.