Aquatic Angiosperms Research Articles

Origin and evolution of the blue light receptor cryptochromes (CRY1/2) in aquatic angiosperms.

Cryptochromes (CRYs), which are responsible for sensing blue light in plants, play a critical role in regulating blue light signals and circadian rhythms. However, their functions extend beyond light detection, as they also aid plants in adapting to stress and potentially other regulatory mechanisms. Aquatic angiosperms, which independently evolved from various angiosperm lineages, have developed specific adaptations to unique light qualities and environmental stressors found in aquatic habitats compared to terrestrial ones. It was hypothesized that the sequences and regulatory networks of angiosperm CRY1/2 underwent adaptive evolution in different aquatic angiosperm lineages. To test this hypothesis, we compiled comprehensive datasets consisting of 55 green plant genomes (including 37 angiosperm genomes), 80 angiosperm transcriptomes, and 4 angiosperm expression networks. Through comparative analysis, we found that CRY1 originated from a common ancestor of seed plants, whereas CRY2 originated from a common ancestor of land plants. In angiosperms, the CRY1/2 sequences of aquatic lineages exhibited positive selection, and the conserved valine-proline (VP) motif of CRY2 showed a convergent loss in two aquatic species. Co-expressed genes associated with blue light receptors (CRY) showed adaptations to aquatic environments, specifically in relation to flooding and osmotic stress. These discoveries shed light on the adaptive evolution of CRY1/2, encompassing their origins, sequences, and regulatory networks. Furthermore, these results provide valuable insights for investigating the uncharacterized functions and regulatory pathways of CRY and offer potential targets for enhancing growth and adaptation in agricultural plants.

Macrophytes as Key Element to Determine Ecological Quality Changes in Transitional Water Systems: The Venice Lagoon as Study Case

According to European Union guidelines, the assessment of the ecological status of Transitional Water Systems (TWSs) should be based on the monitoring of biological communities rather than physico-chemical parameters and pollutants. Macrophytes, including aquatic angiosperms and macroalgae, are organisms that respond more quickly to environmental changes by varying the structure and biomass of their assemblages. There are several ecological indices based on macrophytes, among them the Macrophyte Quality Index (MaQI), which has been intercalibrated with water and sediment parameters, nutrient concentrations, and pollutants and is used to determine the ecological status of Italian TWSs. In the Venice Lagoon, it was applied to 87 stations, showing a significant score increase over the last ten years of monitoring (2011–2021) due to progressive lagoon environmental recovery. The dominant taxa assemblages, previously dominated by Ulvaceae, were replaced by species of higher ecological value, with an increase in the number and distribution of sensitive species, as well as the spread and cover of aquatic angiosperms. The rise in the Ecological Quality Ratio (EQR) determined by the MaQI confirms the key role of macrophyte monitoring in detecting environmental changes in TWSs. In fact, a simple check of the presence or absence of aquatic angiosperms and sensitive species is sufficient for an initial rapid assessment of the ecological status of these environments.

Role of Tissue Culture in the Study of Aquatic Plants

There has been a revival of interest in the study of aquatic angiosperms. Escalating population pressure and dwindling resources have urged scientists to harness the untapped potential of aquatic plant wealth. Safe and effective control measures are needed to check the spread of water weeds. The problems and advantages of growing whole plants under axenic conditions have been summarised. The uses to which this technique can be put have been outlined. A brief account of the basic knowledge on growth, regeneration, heterophylly, flowering, pollination, reproduction, genetic variability and taxonomy gained from the tissue culture of aquatic plants has been presented.

Aquatic Angiosperms of India

Some of the salient features pertaining to the taxonomy of a few interesting aquatic angiosperms and their distribution, variability of fruits and seeds, their economic importance, floral biology, anatomy, embryology and cytology are presented here. The varied and diverse pattern of distribution of some Indian aquatic taxa is described with examples. Certain unique embryological features noticed in some aquatic plants are pointed out. Though the data on the cytplogy of Indian aquatic angiosperms is raher meagre, it is evident that from the evolutionary point of view, polyploidy has played an important role in the differentiation of races, varieties and species. The nomenclature of Nymphoides Hill and Necharmndra Planch., is discussed. Finally, the ample scope present for further work for a better understanding of these plants is emphasised.

Aquatic Angiosperms of Jaunpur

The present paper deals with an investigation of aquatic angiosperms of Jaunpur District. Geography, climate and ecological classification of the species along with diagnostic features and phenology are described. In all, 127 species representing 91 genera and 44 families have been recorded.

The reproductive biology of <em>Marathrum rubrum Novelo & C. T. Philbrick</em>: morphological and anatomical changes during flower development

Background: Podostemaceae is the largest family of strictly aquatic angiosperms. Species of this family possess unusual morphological and reproductive characters, grow attached to rocks in rivers with strong currents, and have a life cycle tightly linked to seasonality. Due to its reduced floral structures, which characterizes most species, the analysis of developmental stages and events such as anthesis or stigma receptivity has proven difficult.
 Question: How floral morphology, floral development and stigma receptivity of different stages of flower development of Marathrum rubrum Novelo & C. T. Philbrick are related among them?
 Studied species: Marathrum rubrum Novelo & C. T. Philbrick.
 Study site and dates: Horcones River, Jalisco, Mexico. January, 2014 and 2015.
 Methods: We made an in situ and lab analyses of flower morphology to assess the relationships between flower morphology, stages of development, reproductive structures, and stigma receptivity, during different stages of flower development.
 Results: When flowers emerge from the spathella, both the ovules and pollen grains are fully developed, implying that sporogenesis and gametogenesis take place within the stem while the plant is still submerged.
 Conclusions: The morphological changes observed in the flowers of M. rubrum during the analyzed stages are related only to events associated with fertilization and fruit development. The time-course of morphological changes in the flowers, from anthesis to fruit formation, lasts 20 to 30 days. The detailed observation of the aerial reproductive biology of M. rubrum bears important implications to the genetic structure of populations, plant fitness and conservation biology in threatened environments.

A Maastrichtian insect assemblage from Patagonia sheds light on arthropod diversity previous to the K/Pg event

Insect faunas from the latest Cretaceous are poorly known worldwide. Particularly, in the Southern Hemisphere, there is a gap regarding insect assemblages in the Campanian-Maastrichtian interval. Here we present an insect assemblage from the Maastrichtian Chorrillo Formation, southern Argentina, represented by well-preserved and non-deformed, chitinous microscopic remains including head capsules, wings and scales. Identified clades include Chironomidae dipterans, Coelolepida lepidopterans, and Ephemeroptera. The assemblage taxonomically resembles those of Cenozoic age, rather than other Mesozoic assemblages, in being composed by diverse chironomids and lepidopterans. To the best of our knowledge, present discovery constitutes the first insect body fossils for the Maastrichtian in the Southern Hemisphere, thus filling the gap between well-known Early Cretaceous entomofaunas and those of Paleogene age. The presented evidence shows that modern clades of chironomids were already dominant and diversified by the end of the Cretaceous, in concert with the parallel radiation of aquatic angiosperms which became dominant in freshwater habitats. This exceptional finding encourages the active search of microscopic remains of fossil arthropods in other geological units, which could provide a unique way of enhancing our knowledge on the past diversity of the clade.

Cryopreservation of Duckweed Genetic Diversity as Model for Long-Term Preservation of Aquatic Flowering Plants.

Vegetatively propagating aquatic angiosperms, the Lemnaceae family (duckweeds) represents valuable genetic resources for circular bioeconomics and other sustainable applications. Due to extremely fast growth and laborious cultivation of in vitro collections, duckweeds are an urgent subject for cryopreservation. We developed a robust and fast DMSO-free protocol for duckweed cryopreservation by vitrification. A single-use device was designed for sampling of duckweed fronds from donor culture, further spin-drying, and subsequent transferring to cryo-tubes with plant vitrification solution 3 (PVS3). Following cultivation in darkness and applying elevated temperatures during early regrowth stage, a specific pulsed illumination instead of a diurnal regime enabled successful regrowth after the cryopreservation of 21 accessions of Spirodela, Landoltia, Lemna, and Wolffia genera, including interspecific hybrids, auto- and allopolyploids. Genome size measurements revealed no quantitative genomic changes potentially caused by cryopreservation. The expression of CBF/DREB1 genes, considered as key factors in the development of freezing tolerance, was studied prior to cooling but was not linked with duckweed regrowth after rewarming. Despite preserving chlorophyll fluorescence after rewarming, the rewarmed fronds demonstrated nearly zero photosynthetic activity, which did not recover. The novel protocol provides the basis for future routine application of cryostorage to duckweed germplasm collections, saving labor for in vitro cultivation and maintaining characterized reference and mutant samples.

Presence of microbiome decreases fitness and modifies phenotype in the aquatic plant Lemna minor.

Plants live in close association with microbial organisms that inhabit the environment in which they grow. Much recent work has aimed to characterize these plant-microbiome interactions, identifying those associations that increase growth. Although most work has focused on terrestrial plants, Lemna minor, a floating aquatic angiosperm, is increasingly used as a model in host-microbe interactions and many bacterial associations have been shown to play an important role in supporting plant fitness. However, the ubiquity and stability of these interactions as well as their dependence on specific abiotic environmental conditions remain unclear. Here, we assess the impact of a full L. minor microbiome on plant fitness and phenotype by assaying plants from eight natural sites, with and without their microbiomes, over a range of abiotic environmental conditions. We find that the microbiome systematically suppressed plant fitness, although the magnitude of this effect varied among plant genotypes and depended on the abiotic environment. Presence of the microbiome also resulted in phenotypic changes, with plants forming smaller colonies and producing smaller fronds and shorter roots. Differences in phenotype among plant genotypes were reduced when the microbiome was removed, as were genotype by environment interactions, suggesting that the microbiome plays a role in mediating the plant phenotypic response to the environment.

Geographic patterns and environmental correlates of taxonomic and phylogenetic diversity of aquatic plants in China

AbstractStudies on large‐scale geographic patterns of aquatic plant diversity can promote research on the generality of macroecological patterns in different ecosystems. Here, we compiled a checklist of 889 aquatic angiosperms in China, including 738 helophytes (emergent and marshy plants) and 151 hydrophytes (submerged, free‐floating, and floating‐leaved plants). We explore the geographic patterns and environmental correlates of aquatic plant diversity based on six metrics including species richness (SR), weighted endemism (WE), phylogenetic diversity (PD), phylogenetic endemism (PE), the standardized effect size of phylogenetic diversity (PDses), and the standardized effect size of mean phylogenetic distance (MPDses). Our results show that the diversity of aquatic plants in China is extremely uneven, with high diversity in southeastern China and low diversity in northwestern China, and the geographic patterns of taxonomic and PD are generally consistent. The pattern of helophytes differs from that of hydrophytes. Notably, the wavy‐shaped pattern of aquatic plant diversity (especially SR and PD for hydrophytes) across the latitude observed in this study is not consistent with those previously observed for aquatic plants in other continents. Climatic variables and water environmental variables are the main drivers of aquatic plant diversity in China; however, the effects of individual variables differ between helophytes and hydrophytes. Water environmental variables have a greater impact on PDses and MPDses of hydrophytes than those of helophytes. Overall, our work provides insight into understanding the large‐scale patterns of aquatic plant diversity and is a critical addition to previous studies on the macroecological pattern of terrestrial organisms.

Geographic patterns of taxonomic and phylogenetic β-diversity of aquatic angiosperms in China

China covers a vast territory harbouring a large number of aquatic plants. Although there are many studies on the β-diversity of total, herbaceous or woody plants in China and elsewhere, few studies have focused on aquatic plants. Here, we analyse a comprehensive data set of 889 aquatic angiosperm species in China, and explore the geographic patterns and climatic correlates of total taxonomic and phylogenetic β-diversity as well as their turnover and nestedness components. Our results show that geographic patterns of taxonomic and phylogenetic β-diversity are highly congruent for aquatic angiosperms, and taxonomic β-diversity is consistently higher than phylogenetic β-diversity. The ratio between the nestedness component and total β-diversity is high in northwestern China and low in southeastern China. The geographic patterns of taxonomic and phylogenetic β-diversity of aquatic angiosperms in China are obviously affected by geographic and climatic distances, respectively. In conclusion, the geographic patterns of taxonomic and phylogenetic β-diversity of aquatic angiosperms are consistent across China. Climatic and geographic distances jointly affect the geographic patterns of β-diversity of aquatic angiosperms. Overall, our work provides insight into understanding the large-scale patterns of aquatic angiosperm β-diversity, and is a critical addition to previous studies on the macroecological patterns of terrestrial organisms.

Can genomics tools assist in gaining insights from the aquatic angiosperms to transform crop plants with multiple carbon concentrating mechanisms to adapt and yield better in challenging environment?

Can genomics tools assist in gaining insights from the aquatic angiosperms to transform crop plants with multiple carbon concentrating mechanisms to adapt and yield better in challenging environment?

New arthropod-Podostemaceae associations in Central and South America.

Podostemaceae are a unique family of aquatic angiosperms found in river rapids and waterfalls throughout southern Asia, Africa, and the Americas. Podostemaceae are understudied, and consequently, the arthropods associated with these plants are not well known. We sought to expand knowledge of arthropod-Podostemaceae associations to better understand the impact of these plants on aquatic ecosystems and biodiversity. We examined samples of Podostemaceae collected between 1998 and 2007 from Brazil, Costa Rica, Suriname, and Venezuela for arthropods even though these samples were not collected with the intent to investigate arthropod-Podostemaceae associations. We examined 15 samples of Podostemaceae, including 10 species never evaluated for arthropod associations, and found over 9000 arthropods representing 12 different orders. The most abundant orders were Diptera (77.88%), Trichoptera (12.90%), Coleoptera (3.35%), and Lepidoptera (2.42%). We found several arthropods not previously reported from Podostemaceae, including Collembola and Acari, documented several instances of insects boring into plant tissues, and provide the first report of an insect-induced gall on Ceratolacispedunculatum C.T. Philbrick, Novelo & Irgang.

Habitat suitability of drift macroalgae in two shallow coastal estuaries of the northern Gulf of Mexico

Drift macroalgae, often associated with seagrass habitats, may provide resources and habitat to seagrass associated fauna, increasing faunal abundance and diversity. Yet, excessive amounts of drift macroalgae can be harmful, reducing the abundance of both aquatic angiosperms and animals by causing localized hypoxia. To ascertain the effects of drift macroalgae at biomasses commonly found in the northern Gulf of Mexico, we quantified recruitment into drift macroalgae without the presence of seagrass and measured associated changes to temperature, dissolved oxygen, and flow in Redfish Bay, Texas and Big Lagoon, Florida, USA. These locations comprise different coastal ecosystems with different compositions of drift macroalgae. In both locations, the presence of macroalgae significantly increased recruitment of small nekton, with higher abundances and species richness found within macroalgae relative to adjacent artificial macroalgae. Flow velocity and dissolved oxygen levels were lower in macroalgae than in adjacent artificial or bare substrate, but still remained above hypoxic levels over daily fluctuations. Despite lower oxygen levels at night, and overall lower water flow, organisms readily recruited into drift macroalgae more so than the artificial habitats nearby. However, the reduction in oxygen reveals that in higher biomasses, macroalgae could adversely affect animals.

Effect of Ecological Recovery on Macrophyte Dominance and Production in the Venice Lagoon

In the last decade, the Venice Lagoon showed a significant environmental recovery that changed the assemblages of macroalgal and aquatic angiosperm dominant species and significantly increased the primary production. The decreasing of anthropogenic impacts, such as eutrophication and clam harvesting, favored a strong reduction of Ulvaceae, replaced by species with higher ecological value, and the recolonization of aquatic angiosperms. Consequently, hypo-anoxic conditions, once frequently occurring in the lagoon, have been considerably reduced and aquatic angiosperms have recolonized the area, covering 94.8 km2 in comparison to the 55.9 km2 recorded in 2003 (+70%). Cymodocea nodosa, Zostera marina, and Zostera noltei expanded by 37.5%, 44.6%, and 191%, respectively, with a significant increase in biomass and primary production. In late spring 2018, angiosperms showed a standing crop of approximately 372 ktonnes (+77%) and a net primary production of approximately 1189 ktonnes FW (+67%). In the meantime, Ruppia cirrhosa, which since the 1980s had disappeared from the lagoon areas subjected to tidal expansion, but was still present in some fishing valleys, recolonized the bottoms of the northern lagoon with meadows of over 6 km2; this accounted for a standing crop and net primary production of 8.9 and 18.0 ktonnes, respectively. Based on surveys carried out in 2021, ecological conditions are still improving, and this is increasing both the biodiversity and the production of macroalgae and aquatic angiosperms.

Phylogenomic Analyses of Alismatales Shed Light into Adaptations to Aquatic Environments.

Land plants first evolved from freshwater algae, and flowering plants returned to water as early as the Cretaceous and multiple times subsequently. Alismatales is the largest clade of aquatic angiosperms including all marine angiosperms, as well as terrestrial plants. We used Alismatales to explore plant adaptations to aquatic environments by analyzing a data set that included 95 samples (89 Alismatales species) covering four genomes and 91 transcriptomes (59 generated in this study). To provide a basis for investigating adaptations, we assessed phylogenetic conflict and whole-genome duplication (WGD) events in Alismatales. We recovered a relationship for the three main clades in Alismatales as (Tofieldiaceae, Araceae) + core Alismatids. We also found phylogenetic conflict among the three main clades that was best explained by incomplete lineage sorting and introgression. Overall, we identified 18 putative WGD events across Alismatales. One of them occurred at the most recent common ancestor of core Alismatids, and three occurred at seagrass lineages. We also found that lineage and life-form were both important for different evolutionary patterns for the genes related to freshwater and marine adaptation. For example, several light- or ethylene-related genes were lost in the seagrass Zosteraceae, but are present in other seagrasses and freshwater species. Stomata-related genes were lost in both submersed freshwater species and seagrasses. Nicotianamine synthase genes, which are important in iron intake, expanded in both submersed freshwater species and seagrasses. Our results advance the understanding of the adaptation to aquatic environments and WGDs using phylogenomics.

Macroevolutionary dynamics in the transition of angiosperms to aquatic environments.

Summary Angiosperm lineages in aquatic environments are characterized by high structural and functional diversity, and wide distributions. A long‐standing evolutionary riddle is what processes have caused the relatively low diversity of aquatic angiosperms compared to their terrestrial relatives.We use diversification and ancestral reconstruction models with a comprehensive > 10 000 genus angiosperm phylogeny to elucidate the macroevolutionary dynamics associated with transitions of terrestrial plants to water.Our study reveals that net diversification rates are significantly lower in aquatic than in terrestrial angiosperms due to lower speciation and higher extinction. Shifts from land to water started early in angiosperm evolution, but most events were concentrated during the last c. 25 million years. Reversals to a terrestrial habitat started only 40 million years ago, but occurred at much higher rates. Within aquatic angiosperms, the estimated pattern is one of gradual accumulation of lineages, and relatively low and constant diversification rates throughout the Cenozoic.Low diversification rates, together with infrequent water transitions, account for the low diversity of aquatic angiosperms today. The stressful conditions and small global surface of the aquatic habitat available for angiosperms are hypothesized to explain this pattern.

Cryptic species of pondweeds (Potamogetonaceae) at an intercontinental scale revealed by molecular phylogenetic analyses

AbstractCryptic species are morphologically indistinguishable but genetically divergent entities that constitute an important part of Earth's biodiversity. They occur in all kingdoms of life, especially when morphological characters are scarce. Compared to the high number of plant species, relatively few cryptic species have been detected so far. Here, we report cryptic species in pondweeds (Potamogeton), freshwater aquatic angiosperms that are characterized by reduced morphology. Using four molecular markers (ITS, 5S‐NTS, rpl20‐5′rps12, trnT‐trnL), three of them unlinked, we found that the widespread P. octandrus consists of three divergent lineages that correspond to the geographic origins of samples from Africa, Asia, and Australia, respectively. Relatively high genetic divergence between these lineages, reciprocal monophyly and many fixed diagnostic characters indicate that P. octandrus consists of three cryptic species. We formally distinguish the African lineage as P. parvifolius and the Australian lineage as P. tenuicaulis from Asian P. octandrus s.str. Potamogeton tenuicaulis is paraphyletic with the Asian species P. cristatus, which differs by unique fruit characters. We assume that the ancestor of P. cristatus originated from Australia and reached Asia by long‐distance dispersal. Quality criteria for assigning species status to cryptic species and their formal taxonomic recognition are discussed.

The Roles of Carbonic Anhydrases in Carbon Concentrating Mechanisms of Aquatic Photoautotrophs

The article surveys the role of carbonic anhydrases (CAs) in inorganic carbon (Ci) acquisition by cyanobacteria, microalgae, and macrophytes under Ci limiting conditions. Slow Ci diffusion in aquatic environments imposes the need for carbon concentrating mechanisms (also named CO2 concentrating mechanisms, CCMs) in aquatic photoautotrophs, to transport Ci against the gradient and ensure a CO2 supply for photosynthesis. There are common requirements for efficient CCM functioning in cyanobacteria, algae, and aquatic angiosperms, including active transport of HCO3- to the Ci-concentrating compartment and CO2 generation from the HCO3- pool in the Rubisco-enriched subcompartment. Facilitating Ci diffusion in aqueous solutions and across lipid bilayers, CAs play essential roles in CCMs that are best studied in cyanobacteria, green algae, and diatoms. Roles of CAs in CCMs depend on their localization and include facilitation of active transmembrane Ci uptake by supplying C1 at the outer surface (Role 1) whilst removing it at the inner surface (Role 2), as well as accelerating CO2 production from HCO3- near Rubisco (Role 3) in a specialised CO2-tight compartment, known as the carboxysome in cyanobacteria or pyrenoid in microalgae. The compartmentalization of CAs is also critical because, if activated in the HCO3- -concentrating compartment, they can easily eliminate the Ci gradient created by the CCMs.

Роль карбоангідраз у механізмах концентрування карбону водних фотоавтотрофів

The article surveys multiple roles of carbonic anhydrases (CAs) in inorganic carbon (Ci) acquisition by cyanobacteria, microalgae, and macrophytes under Ci limiting conditions. Slow Ci diffusion in aquatic environments imposes the need for carbon concentrating mechanisms (also named CO2 concentrating mechanisms, CCMs) in aquatic photoautotrophs to transport Ci against the gradient and ensure CO2 supply to photosynthesis. There are common requirements for efficient CCM functioning in cyanobacteria, algae, and aquatic angiosperms, including active transport of HCO3- to the Ci-concentrating compartment and CO2 generation from the HCO3- pool in the Rubisco-enriched subcompartment. Facilitating Ci diffusion in aqueous solutions and across lipid bilayers, CAs play essential roles in CCMs that are best studied in cyanobacteria, green algae, and diatoms. Roles of CAs in CCMs depend on their localization and include facilitation of active transmembrane Ci uptake by its supplying at the outer surface (Role 1) and removal at the inner surface (Role 2), as well as the acceleration of CO2 production from HCO3- near Rubisco (Role 3) in a special CO2-tight compartment, carboxysome in cyanobacteria or pyrenoid in microalgae. The compartmentalization of CAs is also critical because, if activated in the HCO3- –concentrating compartment, they can easily eliminate the Ci gradient created by CCMs.