The antiprotozoal and antimicrobial properties of the extract and fractions of the whole plant of Pallenis hierochuntica were investigated against a panel of pathogenic organisms. Fractionation of the methanol extract of the whole plant of Pallenis hierochuntica using reverse-phase chromatography gave 28 fractions and led to the isolation of 2 new bisabolone hydroperoxides, 6,10 β,11-trihydroxy-bisabol-2-ene-1-one (1a), 6,10 α,11-trihydroxy-bisabol-2-ene-1-one (1b) and also 6,10 β-dihydroxy-bisabol-2,11-diene-1-one (2). They were characterised by extensive spectrometric analysis. Anti-infective investigations of the fractions revealed that 22 to 26 possessed significant antimalarial activity against the D6 and W2 strains of Plasmodium falciparum with IC50 = 7.62 - 9.91 µg/mL and 5.49 - 6.08 µg/mL, respectively, and SI>6.0 on average. Fractions 7, 16 to 24 exhibited good activity against Leishmania donovani promastigotes (IC50 = 6.71 - 18.77 µg/mL). Fractions 25 to 28 were active against T. brucei trypomastigotes, 25 being the most potent (IC50 = 4.13 µg/mL). Only 11 to 13 were active against Aspergillus fumigatus (IC50 = 13.406 µg/mL). 1a and 2 were not promising against the organisms tested. 1a and 1b were characterised for the first time.