Obesity has reached epidemic levels around the world. There is a need for a better understanding of the different factors in the digestive tract environment that may modulate adipogenesis. Our goal is to understand the influence of potential probiotics on the differentiation and subsequent lipid storage of adipose cells. This study was performed to test the in vitro effects of a Lactobacillus rhamnosus isolate from “amabere amaruranu”, a traditional Kenyan cultured milk, on 3T3‐L1 cell line. Cultures of 3T3‐L1 cells were treated with bacterial isolate cell extract, filtered supernatant from overnight bacterial culture or with a PBS control. Cells were allowed to differentiate in the presence of different dose levels of appropriate treatments for 10 days. Cells were collected, lysed and the resultant lysate analyzed for adipogenic‐related transcription factors using western blot. Protein expression levels indicated that the treatment with bacterial isolate cell extract, but not the bacterial culture supernatant, downregulated the expression of various adipogenic‐related transcription factors in a dose‐dependent manner. The highest dose of the bacterial cell extract downregulated peroxisome proliferator‐activated receptor‐γ, sterol regulatory element‐binding protein 1, and adipose triglyceride lipase by 1.6, 1.5, and 1.8 fold, respectively. The cell extract did not affect the level of expression of CCAAT/enhancer binding protein‐α. In conclusion, bacterial cell extract from, Lactobacillus rhamnosus, from “amabere amaruranu” cultured milk showed anti‐adipogenic properties, and could be used for anti‐obesity management. This study shows that the L. rhamnosus isolate warrants further studies in vivo.