Grain amaranth populations from their centers of origin in the New World had shown a pattern of allozyme variation that suggested most landraces to be highly homozygous mixtures of genotypes. To compare this pattern of variation with the variation for morphological traits, 15 selfed families from each of six populations were grown in a replicated field experiment. Four pigmentation traits known to be smiply inherited were scored along 18 other morphological traits. Populations varied for the amount of polymorphism for marker loci, and exhibited little heterozygosity. Analysis of variance for the quantitative traits showed significant interpopulation differences for each of the observed characters. Populations differed for the number of metric traits showing significant between-family differences for just one of the metric traits whereas another had between-family differences for all ten. These results suggested high levels of homozygosity within these landraces; thus, variation for quantitative traits conformed well with the allozyme variation patterns.
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