Abstract Basic ecological data for caecilians are relatively lacking. This study presents the first comprehensive ecological investigation of the Amazonian aquatic caecilian Potomotyphlus kaupii, utilizing a large sample size. We collected population data over a 14-month period, and also used data of museum specimens, both from Belém, State of Pará, Brazil. Our analysis focused on sex ratio, sexual size dimorphism (SSD), female fecundity, and ecological observations. No significant differences in adult sex ratio were found. SSD was found in some characters such as circumference at midbody and body mass with females being larger than males, while males had a wider and longer cloacal disc. We provide the first determination of the approximate size at which males diverge from females in the terminal portion of the body, demonstrating an allometric growth pattern of the cloacal region. Female size showed a positive correlation with the number of ovarian eggs, indicating an important reproductive strategy. Furthermore, a novel behaviour in P. kaupii was documented. We expand the understanding of Gymnophiona biology, in particular of a fully aquatic species, and provide support for future ecological and conservation research on caecilians.