Currently, the alarm functions of existing levee seepage monitoring systems are limited to single-parameter monitoring and lack rate-of-change alarms and correlation alarms. This can lead to false alarms, missed alarms, equipment failures, or unnecessary downtime. To enhance the intelligence of levee safety monitoring and seepage alarms, a levee seepage intelligent alarm system based on a Bidirectional Long Short-Term Memory (BILSTM) network model was designed and implemented. Firstly, data cleaning and preprocessing are carried out on the engineering safety monitoring operation data to reduce the influence of dirty data such as outliers and repetitive values on the accuracy of alarms. Secondly, for the correlation between the piezometric tube water levels of the levee and the Yangtze River water levels, a correlation analysis based on Mutual Information (MI) theory was conducted to minimize the effect of piezometric tube water level change delays on correlation. Finally, the BILSTM model was used to predict trends in these potentially abnormal data intervals. Based on engineering application requirements, alarm thresholds were established, and a multi-level alarm module was developed. Field operation test results show that the proposed method can accurately predict the piezometric tube water levels of levees, achieving intelligent alarms within the engineering safety monitoring system.