This study investigates the Linear Parameter Varying (LPV) control of a Horizontal Axis Wind Turbine (HAWT) smart rotor in order to alleviate the structural loads. The smart rotor blades are equipped with actuators called Deformable Trailing Edge Flap (DTEF). These flaps benefit from a continuous airfoil deformation on the trailing edge in order to change the aerodynamic properties of blades. The objective of using a flap is to reduce the amplitude of load fluctuations in high wind speeds to decrease the fatigue loads on the wind turbine components and increase their working life. Here, the aerodynamic behavior of NACA 64-418 airfoil in the presence of DTEF deflection is studied numerically. The airfoil with 10% chord deformation is mounted on 5 MW NREL reference wind turbine blades in 67% to 95% of its length relative to the blade root. The nonlinear aeroelastic FAST code is used to determine the effects of DTEFs on structural load mitigation. Consequently, the modeling of nonlinear wind turbine system using LPV approach is discussed including the angle of DTEFs as a control input. A robust LPV controller has been designed using Linear Matrix Inequality (LMI) solution along the operating trajectory to guarantee the internal stability and H∞ robust performance of the closed-loop system in the presence of modeling uncertainties as well as wind turbulence. In sum, the idea of this study is the aerodynamic modeling of the wind turbine equipped with a smart rotor, designing an LPV controller and comparing the results with the conventional PI gain-scheduled controller. The principal objective is to reduce the amplitude of blade root flapwise bending moment oscillations about its mean values along the operating trajectory. As a summary of the results, a reduction in blade root flapwise bending moment fatigue load has been observed by 33% based on Damage Equivalent Load (DEL) calculation.