Acidification Stress Research Articles

The water content, apoptosis, and proliferation of the brain in marine medaka affected by seawater acidification.

A possible explanation for ocean acidification-induced changes in fish behavior is a systemic effect on the nervous system. Three biological barriers at the blood-brain interface effectively separate the brain from the body fluids. It is not known whether fish brain regions in contact with these barriers are affected by acidification. Here, we studied structural changes in medaka (Oryzias melastigma) brain regions contacting cerebrospinal fluid (CSF) after short-term (7 days) CO2 exposure. The brain water content decreased significantly and the superficial structure of the pia mater was changed, but there was no obvious damage to the internal structures of the brain after seawater acidification. Seawater acidification also led to an increase in apoptosis and a decrease in the number of proliferative cells in brain areas contacting CSF. These results indicate that the structure of CSF-contacting brain regions in medaka was affected by seawater acidification, and the brain responded to seawater acidification stress by increasing apoptosis and reducing proliferation.

Water Hyacinth Biochar: A Sustainable Approach for Enhancing Soil Resistance to Acidification Stress and Nutrient Dynamics in an Acidic Nitisol of the Northwest Highlands of Ethiopia

Soil acidity impacted over 43% of Ethiopia’s arable land and debilitated agricultural productivity. Due to reacidification susceptibility, high costs, and inadequate availability of lime, biochar has emerged as an alternative soil acidity ameliorator. However, biochar application, particularly from invasive plants such as water hyacinth, as a soil acidity amendment and waste management strategy has not fully expanded in Ethiopia. Therefore, this study investigated the potential of water hyacinth biochar (WHB) to enhance soil resistance to acidification stresses and nutrient dynamics in an acidic Nitisol of the northwest highlands of Ethiopia. An incubation study was conducted using nine treatments viz. control (soil only), biochar produced using a furnace (WHBf), and a grounding method (WHBg) each at 1% and 2% application rates, lime (L), fertilizer (F), 2% WHBf combined with fertilizer (2WHBfF), and lime combined with fertilizer (LF). Soil samples, except the control, underwent simulated acidification with HNO3. The results showed that WHB decelerated nitrification, reduced H+ ions released into the soil, and enhanced available phosphorus and nitrogen dynamics. After incubation, 1% and 2% WHB applications increased soil pH in the range of 0.30–0.35 and 0.72–0.86 units, respectively, compared to the limed soil. Conversely, exchangeable acidity decreased by 26.5% to 28.8% and 58.4% to 63%, respectively. The 2WHBfF treatment led to soil pH increases of 0.71 and 0.90 units, with exchangeable acidity reductions of 49.8% and 64.7% compared to the LF and F treatments, respectively. Compared to lime, WHB treatments demonstrated more effective resistance against soil acidification from nitrification and simulated acidification with HNO3. Therefore, WHB can be used as a sustainable approach to increase soil resistance against various acidification stresses while aiding in soil nutrient management. The study’s findings can offer valuable insights to change environmental challenges into sustainable soil acidity management approaches.

Antioxidant and Metabolic Response to Acute Acidification Stress of Juvenile Yellowfin Tuna (Thunnus albacares)

This study aimed to explore the impact of acute acidification on the antioxidant, metabolic performance, and liver histology of juvenile yellowfin tuna. The experiment subjected juvenile yellowfin tuna to a pH gradient environment of 8.1, 7.6, 7.1, and 6.6 for 48 h. The findings indicate that a seawater pH of 7.1 significantly impacts the antioxidant and metabolic systems of the juvenile yellowfin tuna in comparison to the control group. At pH 7.1, there were observed increases in glutathione reductase (GR), total antioxidant capacity (T-AOC), lactate dehydrogenase (LDH), hexokinase (HK), pyruvate kinase (PK), sodium-potassium ATPase (Na+K+-ATP), and calcium-magnesium ATPase (Ca2+Mg2+-ATP). Conversely, low-density lipoprotein cholesterol (LDL-C), high-density lipoprotein cholesterol (HDL-C), and triglycerides (TGs) were not significantly different across the treatment groups. However, an increase in transaminases at pH 7.1 suggested potential liver damage, which was further supported by observed structural liver tissue degeneration and hepatocyte vacuolation. In conclusion, under conditions of acute acidification stress, there is a decrease in antioxidant capacity and a suppression of metabolic levels in juvenile yellowfin tuna, leading to oxidative damage. This study lays the foundation for an in-depth understanding of the response mechanisms of juvenile yellowfin tuna in response to seawater acidification as well as healthy tuna farming in the broader context of seawater acidification.

Synergistic response to climate stressors in coral is associated with genotypic variation in baseline expression.

As environments are rapidly reshaped due to climate change, phenotypic plasticity plays an important role in the ability of organisms to persist and is considered an especially important acclimatization mechanism for long-lived sessile organisms such as reef-building corals. Often, this ability of a single genotype to display multiple phenotypes depending on the environment is modulated by changes in gene expression, which can vary in response to environmental changes via two mechanisms: baseline expression and expression plasticity. We used transcriptome-wide expression profiling of eleven genotypes of common-gardened Acropora cervicornis to explore genotypic variation in the expression response to thermal and acidification stress, both individually and in combination. We show that the combination of these two stressors elicits a synergistic gene expression response, and that both baseline expression and expression plasticity in response to stress show genotypic variation. Additionally, we demonstrate that frontloading of a large module of coexpressed genes is associated with greater retention of algal symbionts under combined stress. These results illustrate that variation in the gene expression response of individuals to climate change stressors can persist even when individuals have shared environmental histories, affecting their performance under future climate change scenarios.

The longevity evaluation of multi-metal stabilization by MgO in Pb/Zn smelter-contaminated soils.

The re-mobilization risks of potentially toxic elements (PTEs) during stabilization deserve to be considered. In this study, artificial simulation evaluation methods based on the environmental stress of freeze-thaw (F-T), acidification and variable pH were conducted to assess the long-term effectiveness of PTEs stabilizedby MgO in Pb/Zn smelter contaminated soils. Among common stabilizingmaterials, MgO was considered asthe best remediation material, since PTEs bioavailability reduced by 55.48% for As, 19.58% for Cd, 10.57% for Cu, and 26.33% for Mn, respectively. The stabilization effects of PTEs by MgO were best at the dosage of 5 wt%, but these studied PTEswould re-mobilize after 30 timesF-T cycles. Acid and base buffering capacity results indicated that the basicity of contaminated soils with MgO treatment reduced under F-T action, and the leachedPTEs concentrations would exceed the safety limits of surface water quality standard in China (GB3838-2002) after acidification of2325 years. No significant changes were foundin thepH-dependent patterns of PTEs before and after F-Tcycles. However, after F-Tcycles, the leaching concentrations of PTEs increased due to the destruction of soil microstructure and the functionality of hydration products formed by MgO, as indicated by scanning electron microscopy (SEM)coupled withenergydispersive Xray spectroscopy (EDS) results. Hence, these findings would provide beneficial references for soil remediation assessments ofcontaminated soils under multi-environmental stress.

Response of CRH system in brain and gill of marine medaka to seawater acidification.

Corticotropin-releasing hormone (CRH) is mainly secreted by the hypothalamus to regulate stress when environmental factors change. Gills contact with water directly and may also secrete CRH to maintain local homeostasis. Ocean acidification changes water chemical parameters and is becoming an important environmental stressor for marine fish. The response of brain and gill CRH systems to ocean acidification remains unclear. In this study, marine medaka were exposed to CO2-acidified seawater (440ppm, 1000ppm, and 1800ppm CO2) for 2h, 4h, 24h, and 7 d, respectively. At 2h and 4h, the expression of crh mRNA in gills increased with increasing CO2 concentration. Crh protein is expressed mainly in the lamellae cells. crhbp and crhr1 expression also increased significantly. However, at 2h and 4h, acidification caused little changes in these genes and Crh protein expression in the brain. At 7 d, Crh-positive cells were detected in the hypothalamus; moreover, Crh protein expression in the whole brain increased. It is suggested that CRH autocrine secretion in gills is responsible for local acid-base regulation rather than systemic mobilization after short-term acidification stress, which may help the rapid regulation of body damage caused by environmental stress.

Transcriptomics, proteomics, and physiological assays reveal immunosuppression in the eastern oyster Crassostrea virginica exposed to acidification stress

Ocean acidification (OA) is recognized as a major stressor for a broad range of marine organisms, particularly shell-building invertebrates. OA can cause alterations in various physiological processes such as growth and metabolism, although its effect on host-pathogen interactions remains largely unexplored. In this study, we used transcriptomics, proteomics, and physiological assays to evaluate changes in immunity of the eastern oyster Crassostrea virginica exposed to OA conditions (pH = 7.5 vs pH = 7.9) at various life stages. The susceptibility of oyster larvae to Vibrio infection increased significantly (131 % increase in mortality) under OA conditions, and was associated with significant changes in their transcriptomes. The significantly higher mortality of larvae exposed to pathogens and acidification stress could be the outcome of an increased metabolic demand to cope with acidification stress (as seen by upregulation of metabolic genes) at the cost of immune function (downregulation of immune genes). While larvae were particularly vulnerable, juveniles appeared more robust to the stressors and there were no differences in mortality after pathogen (Aliiroseovarius crassostrea and Vibrio spp.) exposure. Proteomic investigations in adult oysters revealed that acidification stress resulted in a significant downregulation of mucosal immune proteins including those involved in pathogen recognition and microbe neutralization, suggesting weakened mucosal immunity. Hemocyte function in adults was also impaired by high pCO2, with a marked reduction in phagocytosis (67 % decrease in phagocytosis) in OA conditions. Together, results suggest that OA impairs immune function in the eastern oyster making them more susceptible to pathogen-induced mortality outbreaks. Understanding the effect of multiple stressors such as OA and disease is important for accurate predictions of how oysters will respond to future climate regimes.

Sea butterflies in a pickle: reliable biomarkers and seasonal sensitivity of Limacina retroversa to ocean acidification in the Gulf of Maine.

The passive dissolution of anthropogenically produced CO2 into the ocean system is reducing ocean pH and changing a suite of chemical equilibria, with negative consequences for some marine organisms, in particular those that bear calcium carbonate shells. Although our monitoring of these chemical changes has improved, we have not developed effective tools to translate observations, which are typically of the pH and carbonate saturation state, into ecologically relevant predictions of biological risks. One potential solution is to develop bioindicators: biological variables with a clear relationship to environmental risk factors that can be used for assessment and management. Thecosomatous pteropods are a group of pelagic shelled marine gastropods, whose biological responses to CO2 have been suggested as potential bioindicators of ocean acidification owing to their sensitivity to acidification in both the laboratory and the natural environment. Using five CO2 exposure experiments, occurring across four seasons and running for up to 15days, we describe a consistent relationship between saturation state, shell transparency and duration of exposure, as well as identify a suite of genes that could be used for biological monitoring with further study. We clarify variations in thecosome responses due to seasonality, resolving prior uncertainties and demonstrating the range of their phenotypic plasticity. These biomarkers of acidification stress can be implemented into ecosystem models and monitoring programmes in regions where pteropods are found, whilst the approach will serve as an example for other regions on how to bridge the gap between point-based chemical monitoring and biologically relevant assessments of ecosystem health.

Seasonal temperature variation in Zostera marina seedlings under ocean acidification

ObjectiveTo investigate the responses of Zostera marina seedlings to the individual and combined stresses of seasonal temperature increase and ocean acidification (OA) caused by global climate change and anthropogenic factors. This data will help in efforts to protect and restore seagrass beds in temperate coastal zones of China.MethodsA mesoscale experimental system was utilized to analyze stress response mechanisms at multiple levels - phenotype, transcriptome, and metabolome - during the seedling stage of Z. marina, a dominant temperate seagrass species in China. The study monitored the seedlings under varying conditions: increased seasonal temperature, OA, and a combination of both.ResultsFindings revealed that under high-temperature conditions, carotenoid biosynthesis was stimulated through the upregulation of specific metabolites and enzymes. Similarly, the biosynthesis of certain alkaloids was promoted alongside modifications in starch, sucrose, and nitrogen metabolism, which improved the plant’s adaptation to OA. Unique metabolic pathways were activated under OA, including the degradation of certain amino acids and modifications in the citric acid cycle and pyruvate metabolism. When subjected to both temperature and OA stresses, seedlings actively mobilized various biosynthetic pathways to enhance adaptability and resilience, with distinct metabolic pathways enhancing the plant’s response under diversified stress conditions. In terms of growth, all treatment groups exhibited significant leaf length increase (p < 0.05), but the weakest growth index was observed under combined stress, followed by the thermal treatment group. Conversely, growth under OA treatment was better, showing a significant increase in wet weight, leaf length, and leaf width (p < 0.05).ConclusionSeasonal temperature increase was found to inhibit the growth of Z. marina seedlings to some extent, while OA facilitated their growth. However, the positive effects of OA did not mitigate the damage caused by increased seasonal temperature under combined stress due to seedlings’ sensitivity at this stage. Our findings elucidate differing plant coping strategies under varied stress conditions, contingent on the initial environment. This research anticipates providing significant data support for the adaptation of Z. marina seedlings to seasonal temperature fluctuations and global oceanic events like OA, propelling the effective conservation of seagrass beds.

Individual Pattern Response to CO2-Induced Acidification Stress in Haliotis rufescens Suggests Stage-Specific Acclimatization during Its Early Life History

The red abalone Haliotis rufescens is a pivotal marine resource in the context of worldwide abalone aquaculture. However, the species has been listed as critically endangered partly because of the life-history massive mortalities associated with habitat climate changes, including short- and long-term ocean acidification. Because abalone survival depends on its early life history success, figuring out its vulnerability to acidification is the first step to establishing culture management strategies. In the present study, red abalone embryos were reared under long-term CO2-induced acidification (pH 7.8 and 7.6) and evaluated. The impairment prevalence was assessed during their larval stages, considering the developmental success, growth and calcification. The result in the stage-specific disturbance suggests that the body abilities evaluated are at the expense of their development stages, of which the critical threshold is found under −0.4 pH units. Finally, the settlement was short-term stressed, displaying the opposite to that observed in the long-term acidification. Thus, the early life history interacts through multiple pathways that may also depend on the acidification challenge (i.e., short or long term). Understanding the tolerance limits and pathways of the stress response provides valuable insights for exploring the vulnerability of H. rufescens to ocean acidification.

Proteomic and transcriptomic analysis of large yellow croaker (Larimichthys crocea) during early development under hypoxia and acidification stress

In recent years, aquatic ecosystems have been exposed to various stressors such as hypoxia and acidification, which has become an issue of significant concern. Many studies in fish have investigated the regulatory mechanisms of the response to hypoxia and acidification stress at the molecular level. However, molecular studies on hypoxia acidification dual stress conditions in rhubarb fish are less. For this study, the juvenile large yellow croaker was used as the study object. Four experimental groups were established, including the control group (normal group, N107; DO = 7.0 mg/L, pH = 8.1), hypoxia group (H107; DO = 3.5 mg/L, pH = 8.1), acidification group (A107; DO = 7.0 mg/L, pH = 7.3), and hypoxia–acidification group (dual stress group, D107; DO = 3.5 mg/L, pH = 7.3). Study of its response mechanism under hypoxia acidification conditions by transcriptome and proteome analysis. The present study revealed that the number of quantifiable proteins was 6303. Five pairwise comparisons between experimental groups demonstrated that a total of 265 DEGs/DEPs showed associations between the transcriptome and proteome at the level of quantitative and differential expression. Comparative proteomic and transcriptomic analyses were performed to identify differentially expressed genes/proteins in juvenile Larimichthys crocea under hypoxia and acidification stress. The GO term enrichment analysis showed that hypoxia had a greater effect on the organism. The KEGG pathway enrichment analysis showed that pathways associated with the extracellular matrix ECM–receptor interaction and protein digestion and absorption pathways were notably affected by hypoxia and acidification stress. Among these, the protein digestion and absorption pathway was significantly affected in all five pairwise comparisons between experimental groups. The ECM–receptor interaction pathway was significantly enriched under dual stress, indicating that dual stress had a greater detrimental effect on fish growth than single stressors. The study provides valuable insights into the potential combined effects of decreased pH and DO in Sciaenidae and elucidates the mechanism underlying the response of L. crocea to simultaneous hypoxia–acidification stress during early development.

Seagrass Thalassia hemprichii and associated bacteria co-response to the synergistic stress of ocean warming and ocean acidification

Seagrass meadows play vital ecological roles in the marine ecosystem. Global climate change poses considerable threats to seagrass survival. However, it is unclear how seagrass and its associated bacteria will respond under future complex climate change scenarios. This study explored the effects of ocean warming (+2 °C) and ocean acidification (−0.4 units) on seagrass physiological indexes and bacterial communities (sediment and rhizosphere bacteria) of the seagrass Thalassia hemprichii during an experimental exposure of 30 days. Results demonstrated that the synergistic effect of ocean warming and ocean acidification differed from that of one single factor on seagrass and the associated bacterial community. The seagrass showed a weak resistance to ocean warming and ocean acidification, which manifested through the increase in the activity of typical oxidoreductase enzymes. Moreover, the synergistic effect of ocean warming and ocean acidification caused a significant decrease in seagrass's chlorophyll content. Although the bacterial community diversity exhibited higher resistance to ocean warming and ocean acidification, further bacterial functional analysis revealed the synergistic effect of ocean warming and ocean acidification led to significant increases in SOX-related genes abundance which potentially supported the seagrass in resisting climate stress by producing sulfates and oxidizing hydrogen sulfide. More stable bacterial communities were detected in the seagrass rhizosphere under combined ocean warming and ocean acidification. While for one single environmental stress, simpler networks were detected in the rhizosphere. In addition, the observed significant correlations between several modules of the bacterial community and the physiological indexes of the seagrass indicate the possible intimate interaction between seagrass and bacteria under ocean warming and ocean acidification. This study extends our understanding regarding the role of seagrass associated bacterial communities and sheds light on both the prediction and preservation of the seagrass meadow ecosystems in response to global climate change.

Whole-Genome Methylation Sequencing of Large Yellow Croaker (Larimichthys crocea) Liver Under Hypoxia and Acidification Stress.

Large yellow croaker (Larimichthys crocea) is an important aquaculture species in China. This study analysed whole-genome methylation differences in liver tissues of young fish under different hypoxic and acidification conditions. Differentially methylated regions (DMRs) and differentially methylated genes (DMGs) were identified. Gene ontology (GO) and Kyoto encyclopaedia of genes and genomes (KEGG) enrichment analyses of DMGs were conducted to explore the mechanism of coping with hypoxic acidification. The main methylation type was CG, accounting for > 70% of total methylation, significantly higher than CHG and CHH methylation types. GO enrichment analysis of DMGs revealed strong enrichment of nervous system development, cell periphery, plasma membrane, cell junction organisation, cell junction, signalling receptor activity, molecular sensor activity, cell-linked tissue junction organisation, cell-cell adhesion and nervous system development. KEGG enrichment analysis of DMR-related genes identified cell adhesion molecules, cortisol synthesis and secretion and aldosterone synthesis and secretion as the three key pathways regulating the physiological responses to hypoxia and acidification. Long-term hypoxic and acidification stress affected the immune system, nervous system and stress responses of large yellow croaker. Whole-genome sequencing analysis of exposed tissues was used to investigate changes that occur in L. crocea in response to hypoxic and acidic conditions at the DNA methylation level. The findings contribute to our comprehensive understanding of functional methylation in large yellow croaker and will support future research on the response mechanisms of this species under different environmental pressures.

The effects of long-term hexabromocyclododecanes contamination on microbial communities in the microcosms

The adaptation of microbial community to the long-term contamination of hexabromocyclododecanes (HBCDs) has not been well studied. Our previous study found that the HBCDs contamination in the microcosms constructed of sediments from two different mangrove forests in 8 months resulted in serious acidification (pH2-3). This study reanalyzed previous sequencing data and compared them with data after 20 months to investigate the adaptive properties of microbial communities in the stress of HBCDs and acidification. It hypothesized that the reassembly was based on the fitness of taxa. The results indicated that eukaryotes and fungi might have better adaptive capacity to these deteriorated habitats. Eukaryotic taxa Eufallia and Syncystis, and fungal taxa Wickerhamomyces were only detected after 20 months of contamination. Moreover, eukaryotic taxa Caloneis and Nitzschia, and fungal taxa Talaromyces were dominant in most of microbial communities (14.467–95.941%). The functional compositions were sediment-dependent and more divergent than community reassemblies. Network and co-occurrence analysis suggested that acidophiles such as Acidisoma and Acidiphilium were gaining more positive relations in the long-term stress. The acidophilic taxa and genes involved in resistance to the acidification and toxicity of HBCDs were enriched, for example, bacteria Acidisoma and Acidiphilium, archaea Thermogymnomonas, and eukaryotes Nitzschia, and genes kdpC, odc1, polA, gst, and sod-2. These genes involved in oxidative stress response, energy metabolism, DNA damage repair, potassium transportation, and decarboxylation. It suggested that the microbial communities might cope with the stress from HBCDs and acidification via multiple pathways. The present research shed light on the evolution of microbial communities under the long-term stress of HBCDs contamination and acidification.

Effects of acidification on nitrification and associated nitrous oxide emission in estuarine and coastal waters

In the context of an increasing atmospheric carbon dioxide (CO2) level, acidification of estuarine and coastal waters is greatly exacerbated by land-derived nutrient inputs, coastal upwelling, and complex biogeochemical processes. A deeper understanding of how nitrifiers respond to intensifying acidification is thus crucial to predict the response of estuarine and coastal ecosystems and their contribution to global climate change. Here, we show that acidification can significantly decrease nitrification rate but stimulate generation of byproduct nitrous oxide (N2O) in estuarine and coastal waters. By varying CO2 concentration and pH independently, an expected beneficial effect of elevated CO2 on activity of nitrifiers (“CO2-fertilization” effect) is excluded under acidification. Metatranscriptome data further demonstrate that nitrifiers could significantly up-regulate gene expressions associated with intracellular pH homeostasis to cope with acidification stress. This study highlights the molecular underpinnings of acidification effects on nitrification and associated greenhouse gas N2O emission, and helps predict the response and evolution of estuarine and coastal ecosystems under climate change and human activities.

Symbiont composition and coral genotype determines massive coral species performance under end-of-century climate scenarios

The recent decline of coral health and substantial loss of coral cover along Florida’s Coral Reef (FCR) results from local stressors such as degraded water quality and disease outbreaks in addition to anthropogenically driven global stressors including ocean warming and acidification. Intervention strategies intended for the restoration of degraded reef habitats need a better understanding of the influence of ocean warming and acidification on coral health to target coral species and individual genotypes that may be more resistant or resilient to such stressors. Here, we examined a suite of physiological traits (coral host and algal symbiont) in response to experimentally elevated water temperatures and pCO2 levels, both separately and in concert, using threatened reef-building corals Pseudodiploria clivosa and Orbicella faveolata reared within a land-based coral nursery. After two months of exposure, responses differed by coral species, where P. clivosa showed declined physiology in response to combined ocean warming and acidification stress and ocean warming alone, whereas O. faveolata showed a positive response under ocean acidification. Responses to temperature could be associated with the algal symbionts harbored, as P. clivosa was dominated by the thermally sensitive Breviolum, and O. faveolata was dominated by the thermally tolerant Durusdinium. Additionally, corals were raised in well-sourced seawater that was naturally high in pCO2, which could have led to corals acclimating to acidified conditions. Of the three P. clivosa genets tested, we determined a top-performing genotype under the combined warming and acidification treatment. O. faveolata, however, displayed high genet variation by treatment and phenotypic trait, making genotype performance rankings challenging to discern. The evidence provided in this study demonstrates that high phenotypic variation in nursery-reared corals contributes to variable warming-acidification responses, suggesting that high-standing genetic variation in nursery-reared corals could support diverse coral restoration population outcomes along FCR.

RNAi Silencing of the Biomineralization Gene Perlucin Impairs Oyster Ability to Cope with Ocean Acidification

Calcifying marine organisms, including the eastern oyster (Crassostrea virginica), are vulnerable to ocean acidification (OA) because it is more difficult to precipitate calcium carbonate (CaCO3). Previous investigations of the molecular mechanisms associated with resilience to OA in C. virginica demonstrated significant differences in single nucleotide polymorphism and gene expression profiles among oysters reared under ambient and OA conditions. Converged evidence generated by both of these approaches highlighted the role of genes related to biomineralization, including perlucins. Here, gene silencing via RNA interference (RNAi) was used to evaluate the protective role of a perlucin gene under OA stress. Larvae were exposed to short dicer-substrate small interfering RNA (DsiRNA-perlucin) to silence the target gene or to one of two control treatments (control DsiRNA or seawater) before cultivation under OA (pH ~7.3) or ambient (pH ~8.2) conditions. Two transfection experiments were performed in parallel, one during fertilization and one during early larval development (6 h post-fertilization), before larval viability, size, development, and shell mineralization were monitored. Silenced oysters under acidification stress were the smallest, had shell abnormalities, and had significantly reduced shell mineralization, thereby suggesting that perlucin significantly helps larvae mitigate the effects of OA.

Saprotrophic fungi buffer the adverse effects of soil acidification on the soil nutrient supply ability of Chinese fir (Cunninghamia lanceolata) plantations

Soil nutrient supply is critical in maintaining plantation productivity and sustainable management. However, long-term continuous planting can result in soil acidification, and the underlying mechanisms of how soil microorganisms maintain soil nutrient supply ability under the stress of soil acidification remain elusive. Here, we investigated soil physicochemical properties and assessed soil fertility levels in mature Chinese fir (Cunninghamia lanceolata) plantations (MatCFPs) and middle-aged Chinese fir plantations (MidCFPs). 16S and ITS rRNA amplicon sequencing were performed to examine the soil bacterial and fungal community structure. Compared with MidCFPs, the soil organic carbon, total nitrogen, total phosphorus, ammonium nitrogen, and available phosphorus contents in MatCFPs soil were significantly higher, thus significantly improving the soil fertility level of MatCFPs. Additionally, we observed a significant decrease in soil pH in MatCFPs compared to MidCFPs. Resulting soil acidification in MatCFPs not only decreased soil bacterial abundance and network stability but also limited bacterial functions related to nitrogen and carbon cycling. In contrast, compared with MidCFPs, fungal abundance and network stability increased in acidified MatCFP soils. Fungal abundance rather than bacterial abundance was positively correlated with the soil fertility level, and saprotrophic fungi were the main microbial driver of soil fertility, which explained the 21.4% of the variation in the soil fertility level. This study improves our understanding of the importance of saprotrophic fungi in maintaining soil nutrient supply ability under the adverse effect of soil acidification and provides insight into sustainable plantation management.

Transcriptomic Analysis of Large Yellow Croaker (Larimichthys crocea) during Early Development under Hypoxia and Acidification Stress.

Fishes live in aquatic environments and several aquatic environmental factors have undergone recent alterations. The molecular mechanisms underlying fish responses to hypoxia and acidification stress have become a serious concern in recent years. This study revealed that hypoxia and acidification stress suppressed the growth of body length and height of the large yellow croaker (Larimichthys crocea). Subsequent transcriptome analyses of L. crocea juveniles under hypoxia, acidification, and hypoxia-acidification stress led to the identification of 5897 differentially expressed genes (DEGs) in the five groups. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes enrichment analyses revealed that several DEGs were enriched in the 'protein digestion and absorption' pathway. Enrichment analysis revealed that this pathway was closely related to hypoxia and acidification stress in the five groups, and we found that genes of the collagen family may play a key role in this pathway. The zf-C2H2 transcription factor may play an important role in the hypoxia and acidification stress response, and novel genes were additionally identified. The results provide new clues for further research on the molecular mechanisms underlying hypoxia-acidification tolerance in L. crocea and provides a basic understanding of the potential combined effects of reduced pH and dissolved oxygen on Sciaenidae fishes.

Environmental memory gained from exposure to extreme pCO2 variability promotes coral cellular acid-base homeostasis.

Ocean acidification is a growing threat to coral growth and the accretion of coral reef ecosystems. Corals inhabiting environments that already endure extreme diel pCO2 fluctuations, however, may represent acidification-resilient populations capable of persisting on future reefs. Here, we examined the impact of pCO2 variability on the reef-building coral Pocillopora damicornis originating from reefs with contrasting environmental histories (variable reef flat versus stable reef slope) following reciprocal exposure to stable (218 ± 9) or variable (911 ± 31) diel pCO2 amplitude (μtam) in aquaria over eight weeks. Endosymbiont density, photosynthesis and net calcification rates differed between origins but not treatment, whereas primary calcification (extension) was affected by both origin and acclimatization to novel pCO2 conditions. At the cellular level, corals from the variable reef flat exhibited less intracellular pH (pHi) acidosis and faster pHi recovery rates in response to experimental acidification stress (pH 7.40) than corals originating from the stable reef slope, suggesting environmental memory gained from lifelong exposure to pCO2 variability led to an improved ability to regulate acid–base homeostasis. These results highlight the role of cellular processes in maintaining acidification resilience and suggest that prior exposure to pCO2 variability may promote more acidification-resilient coral populations in a changing climate.