Light is essential for phytoplankton photosynthesis and many other biogeochemical processes in the aquatic system. However, light regimes vary greatly in the estuaries and coasts due to the optical complexity of the Case-2 waters. In this study, observed vertical profiles of photosynthetically active radiation (PAR; 400-700 nm) in a highly turbid mega estuary, the Changjiang (Yangtze River) Estuary, are used to quantify the effects of sedimentary and biogeochemical components on PAR attenuation in the water column and associated ecological impacts. The in-situ data suggest suspended sediment plays the most crucial role in light diffuse attenuation coefficient (Kd) distribution, followed by salinity (i.e., an index for colored dissolved organic matter) and phytoplankton chlorophyll-a. A new parameterization of Kd, based on suspended sediment, chlorophyll-a concentration, and salinity, is fitted using multiple linear regression. The previous and new Kd parameterizations are further applied to a coupled hydrodynamics-sediment-ecosystem model to simulate spring phytoplankton blooms. Comparative model runs reveal that the new Kd parameterization resulted in a better representation of the spring bloom patterns in magnitude, horizontal distribution, and vertical thickness of the high chlorophyll-a band offshore the turbidity maximum zone during the spring bloom. In summary, accurate representations of underwater light fields in the optically complex Case-2 water are critical in understanding biophysical processes that control planktonic ecosystem dynamics in the estuaries and coastal seas.
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