As one of the world’s four Greater Bay Areas, the Guangdong–Hong Kong–Macao Greater Bay Area (GBA) faces many environmental challenges along with rapid economic development, causing significant degradation of aquatic ecosystems. However, there is limited knowledge on long-term environmental changes (i.e., >50 years), and restoration of the degraded aquatic ecosystems in the GBA has become increasingly difficult. This study selects a typical inland water body, the Miaotan Reservoir, from Huizhou City in the GBA, to explore long-term changes in water and the eco-environment over the past 70 years and to provide some restoration and management strategies for degrading aquatic ecosystems in the region. We collected a sediment core from the reservoir center and established an age–depth profile by integrating 210Pb and 137Cs dating. We then set up high-resolution diatom community succession stratigraphy and multiple indicators (grain size, element, geochemical and social indicators) as responses to environmental changes in the reservoir. Our results show that significant changes have occurred in the ecosystem and environment of the Miaotan Reservoir and its catchment over the past 70 years. The diatom community underwent a gradual transition from absolute dominance of the mesotrophic species Aulacoseira granulata to dominance of the eutrophic species Nicizschia gracilis, Nicizschia palea and Achanathes sp., indicating the onset of water quality degradation and ecosystem changes in the 1990s due to eutrophication. The RDA (Redundancy analysis) results demonstrate that exogenous pollutant inputs into the Miaotan Reservoir resulting from agricultural activities over the period led to serious environmental changes, e.g., toxic algal bloom and heavy metal pollution. This study enriches our understanding of long-term environmental changes in inland lakes and reservoirs in South China and provides insights into the restoration and management of aquatic ecosystems in the GBA.
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