6-membered Ring Research Articles

Pyrazoline Derivatives: Exploring the Synthesis and Development of New Ligands for Anti-Cancer Therapy.

Pyrazoline is a 5-membered ring that has two adjacent nitrogen. It has gained advanced attention from medical and organic chemists due to very low cytotoxic activities. It is applicable and more applied in research fields and has various pharmacological activities, including cardiovascular, anti-tumor, and anti-cancer properties. In this review, the main objective is to study the pharmacological aspects of pyrazoline and its derivative analogs. The present synthetic pyrazolines are better scaffolds, which show more biological and medicinal characteristics. These compounds exhibit diverse pharmacological activities, showcasing their potential as promising candidates for cancer therapy. Pyrazolines demonstrate remarkable anti-proliferative and apoptosis-inducing effects on cancer cells, attributed to their distinctive molecular structure. This review highlights the growing significance of pyrazolines in medicinal chemistry, emphasizing their role in designing novel anticancer agents. The multifaceted properties of pyrazolines offer a compelling foundation for further research, driving innovation in the quest for effective and targeted anticancer drugs.

Nonadiabatic ab initio chemical reaction dynamics for the photoisomerization reaction of 3,5-dimethylisoxazole via the S1 electronic state.

Nonadiabatic ab initio molecular dynamics simulations were performed to explore the photoisomerization pathway from isoxazole (iso-OXA) to oxazole (OXA), considering four electronic states. The XMS-CASPT2 and SA4-CASSCF theories were employed to describe these electronic structures, which were caused by 12 electrons in 11 orbitals with the cc-pVDZ + sp diffuse basis set; the Gaussian s- and p-type diffuse functions were extracted from Dunning's aug-cc-pVDZ function. The potential energy and its gradient at each time step were computed on-the-fly at these levels in the time evolution of the classical trajectory. When the two electronic states were close to each other, the trajectory surface hopping (TSH) judgment between the two adjacent states was carried out by the anteater procedure based on the Zhu-Nakamura formula (ZN-TSH). The two different excited state lifetimes were found to exist in the first electronic state (S1), estimated at 10.77 and 119.81 fs. Upon photoexcitation, the N-O bond breaks and energetically relaxes to the ground state (S0). In the pathway leading to the main product, azirine formation, the 5-membered ring retains a planar structure while undergoing a non-adiabatic transition with an increasing N-O bond distance. Furthermore, it was verified that a 1,2-shift takes place in the pathway that results in the production of ketenimine, causing a nonadiabatic transition.

1,4-Dihydropyrrolo[3,2-b]pyrroles with Two Embedded Heptagons via Alkyne Annulation.

Drastic changes to the character of the acidic catalyst enable the reversal of the double alkyne benzannulation reaction output. In the presence of a strong Brønsted acid, 1,4-dihydropyrrolopyrroles undergo transformation which results in the formation of two 7-membered rings. Computational studies imply that the thermodynamically unfavored 7-membered ring is forged via the kinetically favored 6-endo-dig attack of a protonated alkyne at the position 3a of pyrrolopyrrole followed by a 1,2-vinyl shift.

Molten Metal Synthesis of Nanographenes.

This manuscript describes a simple and effective method to cyclodehydrogenate arenes using liquid alkali metals. Direct reaction between molten potassium and arenes forms 6-membered rings and zigzag edged structures within polyarenes. The approach is extended to integration of pyridinic nitrogen and 5-membered rings to arene structures and synthesis of larger, open-shell nanographenes.

Influence of the Bis-Carbene Ligand on Manganese Catalysts for CO2 Electroreduction.

First row transition metal complexes have attracted attention as abundant and affordable electrocatalysts for CO2 reduction. Manganese complexes bearing bis-N-heterocyclic carbene ligands defining 6-membered ring metallacycles have proven to reduce CO2 to CO selectively at very high rates. Herein, we report the synthesis of manganese carbonyl complexes supported by a rigid ortho-phenylene bridged bis-N-heterocyclic carbene ligand (ortho-phenylene-bis(N-methylimidazol-2-ylidene), Ph-bis-mim), which defines a 7-membered ring metallacycle. We performed a comparative study with the analogues complexes bearing an ethylene-bis(N-methylimidazol-2-ylidene) ligand (C2H4-bis-mim) and a methylene-bis(N-methylimidazol-2-ylidene) ligand (CH2-bis-mim), and found that catalysts comprising a seven-membered metallacycle retain similar selectivity and activity as those with six-membered metallacycles, while reducing the overpotential by 120-190 mV. Our findings reveal general design principles for manganese bis-N-heterocyclic carbene electrocatalysts, which can guide further designs of affordable, fast and low overpotential catalysts for CO2 electroreduction.

Synthesis, Characterization, Molecular Modeling Studies and Bioactivity of a Novel Bicyclic Compound of δ-lactam with Oxazepine Ring Containing Sulphur Substitute using an Economic Method

Penicillin resistance is a commonly present and controversial matter due to the misuse by people for various reasons. However, few studies have examined the bioactivity of 5- and 6- membered rings. In this study, we aimed to synthesize a new compound containing a 5-membered ring following a short and low-cost method and combined it with oxazepine ring via Schiff bases to produce a bicyclic molecule (Lactozepine). In vitro examinations were conducted to assess the bioactivity of the prepared compound, including anti-bacterial, anti-fungal and antioxidant activities, which showed a wide zone of inhibition of lactozepine against Streptococcus pneumoniae but no inhibition was shown against Klebsiella pneumoniae and Staphylococcus aureus except at a high concentration similar to the result of the anti-fungal assessment. Furthermore, lactozepine showed significant antioxidant activity against free radical formation. The molecular modeling and docking assessment showed the ability of lactozepine to bind to bacterial proteins and inhibit their growth with the lowest free energy for the greatest and strongest binding affinity with the PDB crystal structures 1VQQ, 2WAE, 1PYY and 1IYS ranging from −6.5 and −7.9 kcal/mol. Moreover, the molecular dynamics (MD) simulation showed that RMSF for the assessed protein’s amino acids remained consistent and tightly bound to lactozepine in the dynamic state. The novel compound lactozepine, with [Formula: see text]-lactam rings attached to oxazepine showed bioactivity promising for in vivo studies in the future.

Contrasteric Glycosylations of Cotylenol and 1,2-Diols by Virtual Linker Selection.

Many terpene glycosides exhibit contrasteric patterns of 1,2-diol glycosylation in which the more hindered alcohol bears a sugar; protection of the less hindered alcohol only increases steric repulsion. Here, we report a method for contrasteric glycosylation using a new sugar-linker that forms a cleavable, 10-membered ring with high efficiency, leading to syntheses of cotylenin E, J, and ISIR-050. Linker selection was aided by DFT calculations of side reactions and stereoselectivity, as well as conformational analyses using autoDFT, a Python script that converts SMILES strings to DFT-optimized conformational ensembles.

Synthesis of Fused Bicyclic [1,2,4]-Triazoles from Amino Acids.

A 3-step modular procedure combining carboxylic acids with acyl hydrazines provides access to medicinally relevant [1,2,4]-fused triazoles. Good to excellent yields are achieved with tolerance of aliphatic and aryl substituents as well as 5-, 6-, and 7-membered rings for the fused ring. Conditions that can avoid column chromatography and be applicable for both small scale discovery efforts as well as large scale development processes are demonstrated within.

Oxidative Coupling: An Important Tool for Pyrrole Synthesis

: In oxidative coupling, two molecules combine with the help of different oxidants and transition metals. It is used to form various natural and synthetic compounds. Oxidative coupling reactions catalyzed by transition metals (Pd or Cu), Iodine, Cobalt, Ti, etc, are used widely for the synthesis of pyrroles. Pyrrole is a 5-membered heterocyclic ring structure that consists of a single nitrogen. Several methods have been adopted and reported for the synthesis of pyrroles and their analogs in the recent past. Synthesis of pyrrole via oxidative coupling takes place in the presence of various catalysts, bases, and solvents and at different temperatures and times. In another method, Oxidative reactions between diols and primary amines utilizing copper/nitroxyl as the catalyst also yield pyrroles. Rhodium has also been used as a catalyst in oxidative coupling reactions between alkynes and carboxylic acid (substituted by heteroarene or arene) to obtain pyrroles. Paal-Knorr reaction is also one of the most common reactions in the synthesis of pyrrole. In the present study, we summarized different oxidative reactions that have been reported for the synthesis of pyrrole. Hopefully, the study will be helpful for the researchers.

Elucidating Confinement and Microenvironment of Ru Clusters Stably Confined in MFI Zeolite for Efficient Propane Oxidation.

Achieving active and stable heterogeneous catalysts by encapsulating noble metal species within zeolites is highly promising for high utilization and cost efficiency in thermal and environmental catalytic reactions. Ru, considered an economical noble metal alternative with comparable performance, faces great challenges within MFI-type microporous zeolites due to its high cohesive energy and mobility. Herein, an innovative strategy was explored that couples hydrothermal in situ ligand protection with stepwise calcination in a flowing atmosphere to embed ultrasmall Ru clusters anchored at K+-healed silanol sites (≡Si-Ruδ+-O-K complexes) within 10-membered ring sinusoidal channels of MFI. Comprehensive experiments and theoretical calculations unveiled that the interplay between confined Ru clusters and MFI induces local strain in MFI, creating a unique catalytic microenvironment around the Ru clusters. This synergy interaction enhances alkane deep oxidation as the confined Ru clusters and the MFI microenvironment collectively pre-activate C3H8 and O2, facilitate the cleavage of C-H and C-C bonds at low temperatures. Notably, the stable geometric and electronic properties of the confined Ru show exceptional thermal stability up to 1000 °C, rivaling fresh catalysts. These findings shed vital methodological and mechanistic insights for developing efficacious heterogeneous catalysts for thermal catalysis.

Effect of Adding Phosphorus on Crystal Structure of W-V-Nb Complex Oxide and Catalytic Selective Oxidation of Acrolein.

The changes in the crystal structure of the W-V-Nb complex oxide with phosphorus addition to the hydrothermal synthesis process are investigated. The effect of the constituent units and crystal structure of phosphorus-added W-V-Nb complex oxide catalysts on the activity and selectivity for selective oxidation of acrolein is discussed. Phosphorus addition to the hydrothermal synthesis process promotes the formation of orthorhombic and trigonal W-V-Nb complex oxides. Orthorhombic and trigonal W-V-Nb complex oxide catalysts give higher acrylic acid selectivity in acrolein oxidation compared to poorly crystalline catalysts that only have {M6O21} pentagonal units and 7-membered rings.

Dissociation Chemistry of Protonated α-, β- and Other Amino Acids Using Multiple Stage Tandem Mass Spectrometry.

To discriminate amino acid isomers by multiple stage tandem mass spectrometry (MSn), the fragmentation of protonated amino acids were investigated by MSn with collision-induced dissociation (CID) and density functional theory calculations. The CID of protonated α-amino acids results in a loss of 46 Da, corresponding to H2O and CO, and iminium ions appear as resultant fragments. The CID of protonated β-amino acids also produces iminium ions, but the corresponding loss is 60 Da instead of 46 Da. H2O loss initiates the fragmentation of protonated β-amino acids, producing protonated β-lactams as an intermediate. Subsequently, protonated β-lactams are easily converted to iminium ions and CH2CO. By contrast, H2O loss from the protonated forms of γ- and ε-amino acids provides protonated lactams with 5- and 7-membered rings, respectively. Protonated lactams with more than 5-membered rings provide stable fragments and do not undergo further degradation during CID. In addition, protonated forms of γ- and ε-amino acids undergo NH3 loss as a competitive fragmentation pathway of H2O loss, producing protonated lactones. Because the fragmentation of protonated amino acid by CID depends on the position of amino and carboxyl groups, the tandem mass spectrometry with CID can discriminate α-, β-, and other amino acids.

N-doped and Bowl-Shaped Azabenzo[3,4]azulenofluorene: Synthesis and Characterization of Bridged Aza-Triarylamines.

Triarylamines are frequently employed as electron donor functional groups in a variety of organic electronic materials. We herein report the synthesis and in-depth characterisation of aza-analogues of fully bridged triarylamines, consisting of 5-, 6- and 7-membered rings. The impact of nitrogen doping and π-extension on the structural, electronic and optical-properties of these contorted heteroaromatic PAHs is thoroughly investigated and paves the way for an improved understanding of the structure-property relationships.

Microwave-Assisted Synthesis of Five and Seven-Membered Heterocycles from Ibuprofen and Study Their Biological Activity

In order to reduce the ulcerogenic effect of ibuprofen carboxylic group has been converted into 7-membered and 5-membered heterocyclic rings. Various 1,3-oxazepane (A3-A6) imidazoldine-2,3-indole (A7-A10) Derivatives of ibuprofen were prepared by cyclization under various reaction conditions in a very good yield. The microbial inhibitory effect of the new agents has been assessed in vitro against Gram-positive and Gram-negative bacteria activity.By creating ibuprofen derivatives, our goal in the current study is to improve the antimycobacterial profile at lower concentrations. The synthesis of derivatives of ibuprofen and their antibacterial and antimycobacterial properties are the subjects of this paper.

Enhancing Aromaticity of Alkenylbenzenes May Decrease Their Metabolic Activation and Reduce Their Potential Cytotoxicity: Lessons Learnt from the Investigation of Myristicin and Elemicin.

Metabolic activation studies of lead compounds are a crucial step in drug development and offer a key consideration during rational drug design. Myristicin (MRS) and elemicin (ELM), natural products belonging to alkenylbenzenes, share the backbone of 1-allyl-3-methoxybenzene. The backbone fuses with a methylenedioxy five-membered ring in MRS, while ELM is connected with two adjacent methoxy groups. ELM displayed powerful ability to induce cytotoxicity in cultured primary hepatocytes relative to MRS. Additionally, ELM exhibited superior efficiency in metabolic activation by CYP3A4, resulting in the formation of reactive metabolites carbonium ion, epoxides, and α,β-unsaturated ketone. Quantum chemical calculation and molecular dynamic studies revealed that the fused methylenedioxy 5-membered ring enhances the aromaticity of MRS, which affects the interaction between the allyl side chain and the heme for metabolic activation by the π-π stacking interaction with the aromatic amino acid residues of the host enzyme.

Dissociation Without Detonation: A DFT Analysis of the Thermally Induced Fragmentation of Binary Sulfur-Nitrogen Rings and Cages.

Potential thermal dissociation pathways available to binary sulfur nitrides have been explored by density functional theory methods, and the results interpreted in terms of their known thermochemical behavior. The cyclic cation/anion pair S3N3± both undergo concerted (4 + 2) cycloreversions to afford the 3-membered thiadiazirine ring c-NSN and, respectively, the SNS± cation/anions. A similar pathway has been identified for S4N2, leading to S3 and c-NSN. More complex multistep routes for the elimination of c-NSN have been identified for the bicyclic cation/anion pair S4N5±, as well as for the neutral cage structures S4N4 and S5N6. For the S4N5+ cation a transition state for competing skeletal scrambling via a 1,3-nitrogen σ-bond shift has been located. For the multiply charged cations S3N22+ and S4N42+, dissociation mechanisms are driven by charge repulsion effects, affording SNS+/SN+ and S3N3+/SN+ respectively. Channels leading to loss of NS+ from the cyclic cation species S4N3+ and S5N5+ have also been examined, and the possible role of open-chain and cyclic S3N2-based intermediates in the formation of S2N2 during the thermal cracking of S4N4 over silver wool is explored.

Fused Hexabenzocoronene-Porphyrin Conjugates with Tailorable Excited-State Lifetimes.

A new clear-cut strategy for fusing N-heterocyclic and carbon-pure systems is introduced en route to a versatile platform of multi-purpose tetrapyrrolic chromophores. In particular, three novel C-C bond-fused porphyrin-hexabenzocoronene (HBC) conjugates were synthesized under oxidative cyclodehydrogenation conditions, starting from tailor-made nickel porphyrin precursors. The fusion of the individual aromatic systems via 5-membered rings led to highly soluble π-extended porphyrins in excellent yields. The resulting porphyrin-HBC conjugates exhibit absorption cross-sections that are of interdisciplinary interest in the ever-growing field of organic photovoltaics and near-infrared (NIR) dyes. Quantum chemical calculations show that the newly formed 5-membered rings induce biradicaloid character in the porphyrin core, which has a strong impact on excited state lifetimes. This is confirmed by a thorough optoelectronic and time-resolved characterization in order to understand these unique features better. Broadened absorption characteristics go hand-in-hand with short-lived excited states with up to six orders of magnitude faster decay rates.

Tuning ZSM-22 zeolite through NH4F etching enables enhanced performance and tailored product distribution in n-alkane isomerization for sustainable aviation fuels

Isomerization of n-alkane remains a significant strategy for producing high-quality sustainable aviation fuels (SAF). Improving zeolite catalyst performance and optimizing iso-product distribution to meet the SAF specification are still challenging. As the limitation mainly originated from the strict shape selectivity of the microporous zeolite structure, feasible methods were highly demanded. In this work, the NH4F etching approach was utilized to controllably regulate the framework structure of ZSM-22 zeolite, leading to the rational variation in the crystallinity, porosity, morphology, and acidity, which were closely correlated with the etching severity. Compared to the elliptical 10-membered ring micropore mouths of the parent zeolite, the micropore mouths of the etched ZSM-22 zeolite tended to be circular, as observed by HRTEM and strongly supported by Raman, realizing the regulation of zeolite structure. For n-decane isomerization, the etched catalysts exhibited a considerable increase in catalytic performance, surpassing the parent Pt/ZSM-22 catalyst and the highest isomer yield of 82.1% at the conversion of 91.4% was achieved. The optimized iso-product distribution with approximatively equal amounts of several mono-branched isomers and much higher contributions of the originally disfavored isomers was also observed due to the tuned shape selectivity and the balanced bifunctionality. This work presented an efficient method to design zeolite catalysts for linear paraffin isomerization beyond the limit set by the zeolite structure and shape selectivity that meets the strict standard specification for the freezing point of the SAF.

Schleyer hyperconjugative aromaticity in indene scaffolds

In the present research, the Schleyer hyperconjugative aromaticity was used to enhance the aromaticity of indene scaffolds. The first section of the research focused on examining the thermodynamic stability and electronic characteristics of the four structural isomers of indene. Results indicate that 1H-indene scaffolds are the most stable thermodynamic isomers of indene derivatives exceeding 100 kJ/mol. The hierarchy of stability is as follows: 1H-indenes > 2H-indenes > 5H-indenes > 4H-indenes. The aromaticity of 5- and 6-membered rings in the isomeric structures was investigated using the B3LYP/6–311 + G(d,p) method in the second section of the study. The hyperconjugative aromaticity of 5MR and 6MR was assessed using the harmonic oscillator model of aromaticity index, Bird index, Shannon index, aromatic fluctuation index, and the nucleus independent chemical shift. The results reveal that introducing electron-donating groups on 6MR enhances the aromaticity of 5MR. Moreover, adding two fluorine atoms on the Csp3 site negatively affects the aromaticity and induces antiaromaticity in the indene scaffold. Based on aromaticity data, the order of increasing aromaticity in the presence of different groups is F < CH3 < H < SiH3 < GeH3 < Si(CH3)3 < Ge(CH3)3. The extent of the Schleyer hyperconjugation interaction was also quantified using the E(2) parameter obtained from the NBO calculations.

High-Pressure Rate Rules for Ether Alkylperoxy Radical Isomerization.

The first isomerization reaction of an alkylperoxy (RO2) radical holds significant importance in low-temperature oxidation, as it governs the branching ratios of the hydroperoxyalkyl (QOOH) radicals, which influence the competition between the chain-propagation and chain-branching reactions. In this study, we systematically calculated high-pressure rate rules for the RO2 isomerization reaction of monoethers, exploring 5-, 6-, 7-, and 8-membered ring transition states. Primary, secondary, and tertiary carbon sites, where both the abstracting peroxy group and the abstracted hydrogen are located, were considered, with particular emphasis on distinguishing between secondary carbons adjacent (alpha) and nonadjacent to the ether functional group. Using the G4//B3LYP/6-311++G(2df,2pd) level of theory and the transition state theory, we estimated the rate constants and the Arrhenius coefficient for over 120 possible isomerization reactions. We examined the effect of ring size and ring atoms, revealing that 6- and 7-membered ring isomerizations were generally the fastest. The impact of the ether functional group on transition states was investigated by comparing reactions with identical ring size, peroxy, and radical positions, but with the ether functional group positioned either outside (i.e., out) or inside (i.e., in) the transition state ring, leading to differences in the rate constants. When comparing to analogous alkane rate constants, differences of up to an order of magnitude were observed, underscoring the need for caution when assigning rate rules by analogy. We applied our rate constants in the di-iso-butyl ether kinetic model and evaluated their influence on low-temperature chemistry finding that they altered the branching ratios by up to a factor of 9, highlighting the significance of site-specific rate constants for more accurate low-temperature modeling.